Cygnus atratus (black swan): 118249640
Help
Entry
118249640 CDS
T09349
Symbol
NFX1
Name
(RefSeq) transcriptional repressor NF-X1
KO
K12236
transcriptional repressor NF-X1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118249640 (NFX1)
04121 Ubiquitin system [BR:
cata04121
]
118249640 (NFX1)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
118249640 (NFX1)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
118249640 (NFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
118249640
NCBI-ProteinID:
XP_035405667
LinkDB
All DBs
Position
2:complement(54172352..54234297)
Genome browser
AA seq
1135 aa
AA seq
DB search
MAEARLGAGALNLSPDAPDSLPGERQSTDVNWVNKDRKESNSNQSRNSLPFSSLSERATD
FENSSTKHCGVFNPESQYGNAQDFHQYFGTTKSSKNRYFQSQRWHRSRNDSTCARNKVRQ
STTDTAASPGTSDAAMVHGRRAPPRGYNDLLSSESDRDVPNADSRGAKPKKTHLMHASGR
GFREKGRQVHEREKRINSKQKVELFENVPSLDLSQSDSSESSVGKAFCEAPNGSGDEQKG
YNYVNKRYPRKPVWNKPPVEKESQRRHDSHRSKNTKVGKKSSHAYTPKDKNERKKELSVC
KNDENLTSESKHELSDSVRCNGRKFLLKGDQVSSLHFSWTQYWKKQSDIPKNKETHTGSL
IEQLTTEKYECMVCCEVVRIVAPVWSCQNCYHVFHLNCIKKWARSPASQAEDGNSGWRCP
ACQNASTQVPRTYTCFCGKVHNPEWNRNEIPHSCGELCGKKRQSLDCPHLCNILCHPGPC
PSCPAFVTKTCECGQTSHSVRCGQSTKIHCSNVCGNTLNCGKHSCTQVCHAGKCSPCQLT
VQQVCYCGSNFKEVLCGTKEEFSDGFGNFSCQNTCGKKLNCGRHNCTQICHPQPCQLCPR
LPQVVYRCPCGQTPLSKLLELGCVERKICTDPIPSCGKTCGKPLSCGSYEFLHTCESLCH
EGECKPCSQTSNIYCRCGFKKKEVPCALLRNKAAITFMCDKRCNKKRSCGRHKCNEVCCV
DTEHKCSLVCGRKLNCGLHRCEEPCHRGSCQTCWQTSFDELTCYCGESVIYPPVPCGTQP
PECKKTCTRPHDCNHPVYHSCHSEEKCPPCTYLTQKWCMGKHELRSNIPCHLTDISCGLR
CNQMLKCGMHKCKRICHKGECLIDEECKQPCVIPRLYCNHPCMAPCHPSSPCPTTSCSAK
VDLHCECGRRKESMICSEASNTYQRIAAISIATKLTDLQLGDSVEISRLITKKEMKQARL
QCDEECLALQRNRRLAEALEIDDNSDPFNIRSSGPKYSDLLKEDARKDLKFVSDVEKEMR
MLVEAVNKGKHTKKSHCYPPMNRDHRRIIHELAQVYGIESVSYDNEPKRNVVITAVKGKS
ICPSNTLTSVLDKEMQNRPPPPIPHYKQTDKSSGSSGLSKPLKEEPVIDYFDVQD
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcgaggctgggcgcaggtgcactgaatctcagtcctgatgcccctgattcc
cttccaggagaaagacaatctacagatgtaaactgggtaaataaagataggaaagaatct
aacagtaatcagagtagaaatagtttaccattttctagtctgtctgaaagagctacggat
tttgaaaactcttccacaaagcattgtggtgtttttaatcctgaaagtcagtatgggaat
gctcaagactttcaccaatattttggtaccactaaaagttcaaaaaatcgctactttcaa
agccagaggtggcacagatcaagaaatgatagcacatgtgctagaaataaggtaagacaa
agtactactgatactgctgcaagtccaggaacttcagatgctgcaatggtacatggaaga
agagcacctcctagaggatataatgaccttctctcttcagagagtgacagggatgtacct
aatgcagatagcagaggggcaaagccaaagaaaacgcacttgatgcatgcatctggaaga
ggtttcagggagaagggaaggcaagtacatgagcgagaaaagagaataaactctaaacag
aaagtagagctgtttgaaaatgttccatctttggatttgagtcagtctgactcttcagaa
tcatctgttggaaaggcattctgcgaggcaccgaatggtagtggggatgagcagaaaggc
tacaattatgtaaacaaaagatatccccggaagcctgtgtggaataaacccccagtggaa
aaagagagtcagagaagacatgattctcatcgtagtaaaaatacaaaagtaggtaagaag
tcttcacatgcatatactccaaaagataaaaatgagaggaagaaagaactctctgtttgc
aaaaatgatgaaaacttgaccagtgagagcaagcatgaattgtctgactctgtcagatgt
aatggaagaaagttcctgctaaagggggatcaggtatcttcccttcatttcagctggacc
cagtactggaagaagcaaagtgatataccaaaaaacaaggaaactcatacagggtccttg
attgagcagctgaccacagagaagtatgagtgtatggtatgttgtgaggtagtccgaata
gtagcccctgtgtggagctgccaaaattgttaccatgtattccacctgaattgcattaag
aaatgggcaagatcaccggcttctcaagcagaagatggtaatagtggttggagatgccca
gcttgtcagaatgcttctacacaagttcctagaacttacacttgtttctgtggtaaggta
cacaatcccgaatggaatagaaatgaaattccgcatagctgtggggagctttgtggaaag
aagagacagagtttggactgtccacatctttgtaacatcctgtgccatccaggaccttgt
ccttcatgcccagcctttgtgacaaagacatgtgaatgtggacaaacaagtcattcagtt
cgttgtggtcaatcaacaaaaattcattgttctaatgtatgtggaaatactttaaactgt
ggtaagcacagctgtacccaggtgtgccatgcaggaaaatgttcgccttgccagctaaca
gtacagcaagtgtgttactgtggaagcaactttaaagaagtattgtgtgggacaaaggaa
gaattctctgatggatttgggaatttctcatgccagaatacatgtggcaaaaaattaaat
tgtgggaggcacaactgtacacaaatatgccatcctcagccttgccagctctgtccacga
cttccacaagtagtgtatcgctgtccctgtggtcagactcctctcagcaagttactggaa
ctaggatgtgttgaacgtaaaatatgcacagatcctatcccgtcatgtggaaaaacatgt
ggcaaacctctttcttgtggtagctatgaattccttcatacatgtgaaagcctttgccat
gaaggagagtgtaaaccatgttctcaaacatcaaatatttattgtaggtgtggcttcaaa
aaaaaggaagtcccatgtgctctgctcaggaataaagctgctattacattcatgtgtgac
aagcgatgcaacaaaaaaagatcatgtggacgacacaagtgtaatgaagtttgctgtgtg
gacacggagcataagtgttctttggtttgtggtcgcaaactcaactgtgggcttcataga
tgcgaagaaccttgtcatcggggcagttgtcaaacctgctggcaaacaagttttgatgag
ttaacttgttattgtggtgaatcggtgatttacccccctgtcccctgtggcactcagcca
ccagagtgtaaaaaaacatgcaccaggccacatgactgtaatcatccggtgtaccattca
tgtcatagtgaggagaagtgtccaccctgtacctacctgactcagaaatggtgtatgggc
aagcatgaactgcgaagtaatattccatgtcatctcactgacatttcctgtggacttcgc
tgcaatcaaatgttaaaatgtggaatgcacaagtgtaaaagaatctgtcataaaggagaa
tgtcttatagatgaagagtgtaaacaaccttgtgttattccaaggctatattgtaatcat
ccctgtatggctccatgtcatccttcttcaccctgcccgacaacatcctgcagtgcaaag
gttgatcttcactgtgaatgtggaagaagaaaggagagtatgatttgctcagaagcatct
aatacgtatcaaagaatagctgctatatctatagccacaaagttaacagatctacagctt
ggagattcagtggaaatcagtaggcttattacgaaaaaagaaatgaagcaggccagattg
caatgtgatgaagaatgtttagctcttcagaggaacaggcgtcttgctgaggctcttgaa
atagatgataattctgaccctttcaacatccgttcttctggaccaaagtacagtgacctt
ttaaaagaagatgcaaggaaggatttaaaatttgtcagtgatgttgagaaggagatgaga
atgcttgtggaagctgtgaataagggcaagcatacaaagaagagtcattgttacccacca
atgaacagggatcatcgcagaatcatccatgaattagctcaggtgtatggcattgaaagt
gtgagctatgacaatgaaccaaagcgtaacgttgttatcactgcagtgaaagggaaatcc
atttgtccaagcaatactttaacttctgtgctagataaagaaatgcagaacaggcctcca
cctcctattcctcattacaaacaaacagataagagtagtggaagcagtggtttatccaaa
ccattaaaagaagagccagtaattgactactttgatgtccaagactga
DBGET
integrated database retrieval system
