Cygnus atratus (black swan): 118249680
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Entry
118249680 CDS
T09349
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118249680 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118249680 (CNOT10)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118249680 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_8
ARM_TT21
TPR_17
DUF6058
TPR_7
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
118249680
NCBI-ProteinID:
XP_035405759
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Position
2:43953961..43985902
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AA seq
744 aa
AA seq
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MAADKAADQGTEKHEGAGTSGITDQEKELSSSALQAFLAGNYDACLQHLNTLQDINKDDY
KITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVILY
HLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQ
GNNNSKNGKNESGNNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQESK
QENGSKTSNQLGGNAENSESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMRK
KPVFQPVHSIQPIQMPAFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacaaggccgcggatcaaggtactgagaaacatgaaggagcgggtacttca
gggattactgatcaggaaaaggagctgtcgagcagtgcactacaagcttttctggctgga
aattatgatgcttgtttgcaacacctaaatacccttcaagacataaacaaagatgactac
aaaataacactgaatactgctgttgcagagttctgtaaaagtaaccagactacaacagac
aatttgaggcaaacccttaaccagttgaagaaccaggttcactctgctgttgaagaaatg
gatggtttagatgatgttgaaaatagtatgctttattacaatcaagctgttattttgtac
catctgcgtcagtatactgaagctatatcagttggagagaagctgtaccagtttatagag
cctttcgaagagaagtttgcacaggctgtgtgcttcttgcttgtggacttgtacctgcta
acttaccaagctgagaaagccttgcatctgcttgctgttctggaaaaaatgatttcacag
ggcaataataacagcaagaatggaaaaaatgagtcaggtaataatacaaataaagactcc
tctaatcaaaaagctgaaagtggagctttaatagaagttgctaaatctaagatacatcag
tataaggtgagagcctatatccagatgaagtcactaaaagcatgcaaaagggagatcaag
tctgttatgaacacagctggaaattcagctccgtctctctttcttaagagtaattttgaa
tatttgaggggcaattaccgtaaagcagtcaaacttttaaacagtgcaaacattgctgaa
catccaggcttcatgaaaacaggtgaatgcttaaggtgcatgttctggaacaatcttggc
tgcatccactttgcaatgggaaagcacaatttaggaattttttacttcaaaaaagcctta
caagaaaatgataatgcgtgtgcgcagctaggaacaggtagctcagatccaggtaaaaaa
ttttcagggaggcccatgtgtacgctgctgaccaacaaacggtatgagttgctctacaac
tgtggaattcagctcctgcatatcgggaggcctttagctgcctttgaatgcctgattgag
gcagtccaggtttatcactcaaaccctcgcctttggctgaggatagctgaatgctgcatt
gctgccaataaggggacttcagaacaagagactaaaggtcttccaagcaaaaagggaatt
gtgcaatctatagtaggtcaaggctaccaccgtaagatagtcctggcatcccagtcaata
cagaatgttgtttataatgatgggcagtcttcagcaatacctgtagccagtatggaattt
gcagcgatttgtctaagaaatgccttgctgttacttccagaagaccagcaggagtcaaag
caagaaaatggatctaaaactagtaatcagctaggtggaaatgcagaaaacagtgaaagc
agtgaagcatgcagcaataaaagtcatgaaggggataaattcattgcagctccaccttct
tcacctttgaagaaacaggaattagaaaatttaaggtgctcaatacttgcctgtagtgct
tacgtggctctggctttgggtgataaccttatggcattgaatcacgcagataaactcctt
cagcaaccaaagctgtcagggtctcttaagtttctcgggcatttgtacgcagcagaagct
ctcatctctctagacagaatatctgatgccatcactcacttgaaccctgagaacgtcact
gatgtttcccttgggatttcttcaaatgaacaggatcaagggtctgacaaaggagagaat
gaggcaatggaatcttctggcaagcagaccccacagtgttatcccagttcagtcacatct
gcacgaacaatgatgttgtttaacctcggaagtgcttactgcttgaggagtgaatatgac
aaagctcgaaagtgtctccatcaggctgcttcattgatccaccccaaagagatccctcca
gaggctattctgctggctgtatatcttgaattacagaatggtaacactcagctggcattg
cagatcatcaagagaaaccagcttctcccttctgtgaaaacactctctgacatgcggaag
aagcctgtttttcagccagtccattcaatccagcccattcagatgccagctttcaccact
gttcaaaggaagtga
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