Cygnus atratus (black swan): 118249698
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Entry
118249698 CDS
T09349
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118249698 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118249698 (NHLRC1)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118249698 (NHLRC1)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118249698 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
Prok-RING_4
zf-C3HC4_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
118249698
NCBI-ProteinID:
XP_035405784
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All DBs
Position
2:52355308..52361492
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AA seq
378 aa
AA seq
DB search
MAAAEAGEAELGLLECRVCFEPYGPGGQRRPRNLPCGHVLCRGCVGALGGRGRLECPFCR
RACGPSDTSDCLPLLQLLEVLGPTCSILPAAGSATPGAPGLRLALGGWGALVNPTGVAAC
PKSGRLAVAHDGKKRIHVFGPSGSCLHRFGERGEAGNDIKYPLDVAVTADGHVVVTDGGD
RAVKAFDWEGRGALAVREGFCLPWGLDATPESDVILTDAEAGALYRLTADFGKGELKKCQ
MLRSKLTSPRGVAVCQTSGAVVVIEHLKARGPNNSSTRIKIFSADMDLVGQMDSFGLNLF
FPSKIYTTAVAFDKEGRIVVTDVCSQAVICLGKPGEFPIFNPLISHGLSYPIGLTYTANN
SLVVLDSGDHTVKIYSST
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggaggcgggcgaggcggagctgggcctgctggagtgccgggtgtgcttc
gagccctacggccccggcgggcagcggcggccgcgcaacctgccctgcggccacgtcctc
tgccgaggctgcgtgggcgccctgggcggccggggccggctggagtgccccttctgccgg
cgggcctgcggcccctcggacaccagcgactgcctgccgctgctgcagctgctcgaggtg
ctgggcccgacctgcagcatcctcccggccgcgggcagcgccacccccggggctccgggg
ctgcggctggccctgggcggctggggggctctggtcaaccccacgggggtggcggcgtgc
cccaagtcggggcgcttggcggtggcccacgacggcaagaagaggatccacgtcttcggg
ccgagcgggtcctgcctgcaccgctttggggagcgcggggaggcgggcaacgatatcaag
tacccgctcgacgtggccgtcacggcggatgggcacgtggtggtcactgacggcggggac
cgcgcggtgaaggccttcgactgggagggaaggggggccttggcggtgcgagagggcttc
tgcctgccatggggcttggacgccaccccggagagcgacgtgatcctgacggacgcggag
gcaggagctctctaccgcctgacggccgactttggaaagggcgagctgaagaagtgccag
atgctccggtccaagttaaccagccccagaggggtggcggtctgccagacctcgggcgct
gttgtggtgatagagcacctgaaggccagggggcccaacaacagcagcacccggataaag
atattcagtgcagatatggatctcgtgggacagatggatagctttggcctgaacctcttt
ttcccctccaaaatatacacgacggctgtggcctttgacaaagagggtcgcatcgtagta
acagatgtctgtagccaggctgtgatatgcttagggaaacctggggagtttcccatcttt
aaccctctaattagccacgggctttcataccccataggactgacttacacagcaaacaat
tccctcgtagttttagacagcggtgatcacacagtaaaaatctatagctccacctga
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