Cygnus atratus (black swan): 118249721
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Entry
118249721 CDS
T09349
Symbol
SSRP1
Name
(RefSeq) LOW QUALITY PROTEIN: FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118249721 (SSRP1)
03036 Chromosome and associated proteins [BR:
cata03036
]
118249721 (SSRP1)
Transcription factors [BR:
cata03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
118249721 (SSRP1)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
118249721 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
118249721
NCBI-ProteinID:
XP_035405857
LinkDB
All DBs
Position
5:11669649..11676800
Genome browser
AA seq
706 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYRLELAEKDLCVKGWNWXTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDE
SFNPGEEDDDVAEEFDSNASASSSSGDGDSDRDEKKPAKKAKIVKDRKPRKKQVESKKGK
DPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAED
ARRDYEKAMKEYSVGSRSESSKTERSKKKKKKQEKQMKGKAEKKGTASKSLSSAKSSAKS
LSESFKSKEFVSSDESSSAESKKEDSEEEGGASPPPSSEDSASGSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgctggagttcaacgagatctaccaggaggtgaagggatccatgaacgac
ggccggctgcggctgagccgccagggcgtgatcttcaagaacagcaagacggggaaggtg
gacaacattcaggcctcggagctggcggagggcgtgtggcgccgcgtggcgctcggccac
ggcctcaagctgctcaccaagaacggccacgtctacaaatacgatggcttccgggaatcg
gagttcgataagctctcggatttcttcaaggcccactatcgcctggagctggcggagaag
gacctgtgtgtgaagggctggaactggngcacggtgaggttcggagggcagctcctctcc
ttcgacatcggggagcagccggtgttcgagatccccctcagcaacgtctcccagtgcacg
acgggcaagaacgaggtgacgctggagttccaccagaacgacgacgctgaggtctcgctc
atggaggtgcgcttctacgtgccccccacccaggaggacggcgtggaccccgtggaggcc
ttcgcgcagaacgtcctctccaaggcggacgtgatccaggccacgggcgacgccatctgc
atcttccgggagctgcagtgcctgacgccccgcgggcgctacgacatccgcatctacccc
accttcctgcacctgcacggcaagaccttcgactacaagatcccctacaccaccgtgctg
cgcctcttcctgctcccccacaaggaccagcggcagatgttcttcgtgatcagcctggac
cccccgataaagcagggccagacccgctaccacttcctcatcctgctcttctccaaggac
gaggacatctcgctgaccctcaacatgaacgaggaggaggtggagaagcgcttcgagggg
cggctcaccaagaacatgtctggctccctctacgagatggtcagccgcgtcatgaaggct
ctggtcaaccgcaagatcaccgtgcctggcaacttccaggggcactcgggagcccagtgc
atcacctgctcctacaaggccagctcggggcttctctacccgctggagcgcggcttcatc
tacgtgcacaagccgcccgtgcacatccgcttcgacgagatctccttcgtcaacttcgcc
cgcgggaccaccaccacccgctccttcgacttcgagatcgagaccaagcagggcacgcag
tacaccttcagcagcatagagagggaggagtacgggaagctcttcgacttcgtcaacgcc
aagaagctgaacatcaagaaccgaggcctcaaggagggaatgaagcagagctacgacgaa
tacgccgactccgacgaggaccagcacgatgcctacctggagaggatgaaggaggagggc
aagatccgggaggagaacgccaatgacagcagcgacgggtctggggaggagacagatgag
tcgttcaaccctggtgaagaggacgatgacgtggctgaagagtttgacagcaacgcctcg
gccagctcctccagcggtgacggtgacagtgaccgggatgagaagaagccagccaagaag
gccaagatcgtcaaggaccgcaagccccgcaagaagcaggtggagagcaagaaggggaaa
gaccccaacgctcccaagaggcccatgtcagcgtacatgctctggctgaatgccaaccgc
gagaagatcaagtccgaccaccccggcatcagcatcacagacttgtccaagaaggctggg
gagctctggaaagccatgtccaaggagaagaaagaggagtgggatcgcaaggcagaagat
gccaggagggactacgagaaggccatgaaggagtacagcgtgggcagcaggtccgagagc
tccaagacggagaggtctaaaaagaagaagaagaagcaggagaagcagatgaaggggaaa
gcagagaagaagggtactgcctccaagtctttgtcctccgcaaagtcctctgccaaaagt
ctgagcgagagcttcaagagcaaggaatttgtctccagtgacgagagctcctctgcagag
agcaagaaggaggactcggaggaggagggaggcgccagcccaccccccagctcagaggat
tccgcatcgggctcggattag
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