Cygnus atratus (black swan): 118249819
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Entry
118249819 CDS
T09349
Symbol
PPFIBP2
Name
(RefSeq) liprin-beta-2 isoform X1
KO
K27096
liprin-beta
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118249819 (PPFIBP2)
Membrane trafficking [BR:
cata04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118249819 (PPFIBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
HMMR_N
DUF724
ADIP
DUF4347
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
118249819
NCBI-ProteinID:
XP_050566964
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All DBs
Position
5:complement(5581362..5685934)
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AA seq
1001 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGTKSAAEYANGAYDIVSPAPSVYLGTFQILHLLEDLKMA
LEMLEDPQEKEALRNQIPGATAVCIREWFEENLSQVNHHSSANNETYQERLARLEGDKES
LILQVSVLTDQVEAQGEKIRDLEICLEGHQLKLNATEEMLQQELLSRTSLETQKLDLMAE
VSDLKIKLVGMEKEQSEYEEKQNKAESVVNLISELQEQMCRLQLEINSRIQERKSQDRKP
DVTPNGPHSSPRSVIETLSQKNCSQCDGLLQELRHLKIKVEELENERNQYEWKLKATKAE
IAQLQEQLALKDAEIERLQSQLSRTSSHSEVAERDQEVQRLKIGMESLLAANEEKDRRIE
ELTLLLSQYRRVKEIMIAAHGSSDRIVSGGNEEELEATLRKWNLLNNPQGDLFKSEASSG
ELPPAMLSPVPHKATEISGTIPVSSTNLTSPQEETLEILNRVPQKKKSSSLEDLQSESLE
KYVDGKPAQPVVEQETKPLVKGSKYQTLPGKLPRPSQNGDQGTYNASNSPDTCGMNDSED
NSILGLRETENVDGTVVSDDLSPLSSGTDSGPQSPLSPENRKSPKGIKKIWGKIRRTQSG
NFPADDLGLAEFRRGGLRATAGPRLSRSKETKGQKSDYNAPFAQWSTERVCNWLEDFGLG
QYVIFARQWVTSGHTLLTATPQDMEKEMGIKHPLHRKKLVLAIKSINAKQDEKSAQLDHI
WVTRWLDDIGLPQYKDQFHESRVDGRMLQYLTVNDLLFLKVTSQLHHLSIKCAIHVLHVN
SFNPHCLRRRPVEENNVSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIILEP
RFNGDTLAMLLNIPPQKTLLRRHLTTNFNVLIGPEAQQEKRDITESTAYTPLTTTAKVRP
KKLGFSHFGNLRKKKFDESTDYICPMDTNPGATNGTQKNYSGYKGLSPFTDRELDQMEHS
EGTVKQIGAFSQGISNLTTMLSQDEMLNDSRFLTPTFEDWR
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgacgctagtcatatgcttgaagcagctttggagcagatggatgacatcatt
gcaggtacaaagtcagctgcagagtatgctaatggtgcttatgatattgtgtcacctgct
ccgtcagtatacttgggcacatttcaaattttacatctcttggaagatctaaagatggcg
ttggaaatgttagaggatccgcaagagaaagaagcattgcgaaatcaaattccaggggcc
acagcagtgtgtataagagagtggtttgaggagaatctgtcacaggtgaatcatcattca
tctgctaataatgaaacctatcaagaaagattggcacgattagaaggtgataaagagtct
ctcatactgcaggtgagtgttcttacagaccaggtggaagctcaaggagagaaaatccgg
gacttagaaatctgtcttgagggacatcagttgaaactgaatgctacagaagaaatgctt
caacaggagctgctaagtcgaacatcactagagactcagaaattggatctaatggctgaa
gtttcagacctgaaaattaagctggttggtatggagaaggaacagagtgaatatgaagag
aaacaaaacaaagctgagtcagtagtgaacctgataagtgagctccaggagcagatgtgt
agactgcagctggaaattaatagtagaatccaagaaagaaagtctcaagataggaaacca
gatgtgacacctaatggccctcactctagtccaagatcagtgatagagactctcagccag
aagaattgctctcagtgtgatggtttgctacaggaacttagacacctcaaaattaaagtg
gaagaactggaaaatgaaagaaatcaatatgagtggaaattaaaagcaactaaagcggag
atagcccagcttcaggagcaattagctctcaaagatgcagaaattgaacgcttacaaagt
caactatctaggacctcatcacatagcgaagttgcagaaagagatcaagaagttcaacgg
ttgaagataggaatggaatcattattggctgcaaatgaagaaaaggaccgccgaatagag
gagttaacactattgctaagccagtacagaagggtcaaggagataatgattgcagctcac
ggctcgtcagacagaattgtctctggtggcaatgaagaggaacttgaggcaactttaagg
aaatggaatcttttgaacaatcctcaaggagatctatttaaatcagaggcctcttcagga
gaattgccaccagctatgttatctccagtgccacacaaagctacagaaatcagtggaacc
attccagtatcttcaactaatctaacctctccacaagaagaaactttggaaatcctaaat
agggttccacagaaaaaaaaatcaagtagtttagaagatttgcagagtgaatccctggaa
aagtatgtagacggaaaaccagcacagcctgttgtagaacaagagactaagccacttgtg
aaaggcagcaaataccaaacattgccaggaaaacttcctcgaccctcacagaatggagac
caaggaacatataacgcgtcaaattcaccagacacgtgtggcatgaacgacagtgaggac
aacagcatcctgggcctgagagaaacagagaacgtggatggtacagtagtctcagatgac
ctttcacctctttcttctggaacggattcaggtccacagtctccactgtctccagaaaat
agaaagagtccaaaagggatcaagaaaatctggggaaaaataagaagaactcagtctggt
aacttccctgcagacgatctgggtttggcagagtttcgaagaggcggtctccgtgcaaca
gctggacctcggttatccagatcaaaggaaaccaaaggccagaaaagtgactacaatgct
ccgtttgctcagtggagcactgagagagtttgtaactggcttgaggacttcggtctaggg
cagtacgtcatttttgcacggcagtgggtgacttcaggccatacactattaactgcaaca
cctcaggacatggaaaaggaaatgggaataaagcatccactgcacaggaagaaattagtt
ttggccattaaatcaataaatgcaaaacaagatgagaaatctgcacaactcgatcatatc
tgggtgacacgctggcttgatgacattggtttacctcagtacaaagaccagtttcatgag
tccagagttgatgggagaatgttgcagtatttaactgtgaatgatcttctctttctgaaa
gtcaccagtcagctgcatcatctgagtattaagtgtgccattcatgtgctgcatgtcaac
agttttaacccccactgtctacgcagaagaccagttgaggagaataacgtttcaccttct
gaagtagtgcagtggtccaatcacagagtgatggaatggctcagatcagttgatctggca
gaatatgcgccaaaccttcgaggaagcggagtgcacggtggcctcattattctcgaacct
cgcttcaatggtgacacactggcaatgctgctgaatattccacctcaaaagaccctactg
cgacgccacctaacaaccaattttaatgtattaattggaccagaggcacagcaagaaaag
agagatataacagagtcaacagcatacacacctctgaccaccactgccaaagttcggcca
aagaaacttggattttcacattttggaaacttaagaaaaaagaaatttgatgaatcaaca
gactacatttgtccaatggatacaaatccaggtgctacaaatggtactcagaagaactat
agtggatacaaaggacttagtccattcactgatagggagctggatcagatggaacattca
gaaggaacagtaaagcaaataggggctttttctcaaggcataagcaatcttacgacaatg
ttaagccaagatgaaatgctaaatgacagcagatttttaacacctacctttgaagactgg
agatga
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