Cygnus atratus (black swan): 118249827
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Entry
118249827 CDS
T09349
Symbol
DTX4
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118249827 (DTX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118249827 (DTX4)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118249827 (DTX4)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118249827 (DTX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_2
zf-ANAPC11
zf-RING_11
zf-RING_5
WWE_5
zf-RING_Vps41
PHD_NSD
zf_RING_Vps8_fungal
zf-RING_16
zf-UDP
zf_RING_Vps8
PHD
Motif
Other DBs
NCBI-GeneID:
118249827
NCBI-ProteinID:
XP_035406095
LinkDB
All DBs
Position
5:complement(11530552..11538113)
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AA seq
623 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVARAGPRAGGSVVLGQADSRLAPYIIDL
QSMHQFRQDTGTIRPVRRSYYDPSSAPGKGVVWEWENDSGSWTPYDMDVGITIQRAYEKQ
HPWVDLSTIGFCYVIDFATMGQINRQTQRKRRVRRRLDMVYPLVSGTLPKSQSWPASPGA
AAAPPAPTCACPQCLLVMSVKAAVSAGGLGAATLQPRKAPPTAPAAPKAPAPAPGAKAAD
GTAAARGSLKVLASQGGRQQAASTPALSSVVSAASPPGPGPGAGSGKASRPGLGTLNRSH
LQRLAIAQSRVLIASGVPTVPVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVL
HPPPVSKSEIQSIPGISHTCRKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERL
SAPSGYKGPQPAIKPDLVGKLAKCGHIFHLHCLVAMYNNGNKDGSLQCPTCKTIYGVKTG
TQPPGKMEYHIIPHALPGHSDCKTIRIIYNIPPGVQGPEHPNPGKSFTARGFPRHCYLPD
SEKGRKVLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEIHHKTEFGSNLTGHGYPDINY
LDNVLAELAAQGITEESLAQEKD
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcgcttcggccgtggtggtgtgggaatggctcaacgagcacgggcggtggcgg
ccctacagcccggccgtcagccaccacatcgaggcggtggcccgtgccgggccgcgggcg
ggaggcagtgtggtgctgggccaggccgacagccgcctggcgccttacatcatcgacctg
cagtccatgcaccagttccgccaggacaccggcaccatccgcccggtgcggcgcagctac
tacgacccgtcgtcggcaccgggcaagggcgtcgtgtgggagtgggagaacgacagcggc
tcgtggacgccctacgacatggacgtgggcatcaccatccagcgcgcctacgagaagcag
cacccctgggtggacctgagcaccattggcttctgctacgtcattgacttcgccaccatg
ggccagatcaaccggcagacccagcgcaagcgccgtgtccgccgccgcctcgacatggtc
tacccgctggtctcgggcaccctgcccaagtcacagtcgtggccggccagcccgggggcg
gccgcggcccccccggcacccacctgcgcctgtccccagtgcctcctggtcatgagcgtc
aaagccgccgtgtccgcgggtggcctcggggctgccaccctgcagcctcgcaaagccccc
cccacagcccccgcagcccccaaagcccccgcgccagccccaggggccaaggcagccgac
ggtacggccgcggcacgtggctcgctgaaggtgctggcctcccaggggggccggcagcag
gcggccagcacgccggcactgagctccgtcgtctctgccgccagcccccccggccccggc
cctggcgccggcagcggcaaggcatcccgccccggcctcggcaccctgaaccgcagccac
ctgcagcgcctggccatcgcccagtcccgggtgctcatcgcctccggggtccccaccgtc
cctgtgaagaacctcaacggctccagccccgtgaaccccgcgctggcaggcatcacaggg
atcctgatgagcgcggcggggctgcccgtctgcctgacgcggccgcccaagctggtgctg
cacccaccgcctgtcagcaaaagcgagatccagtccatccctggcatctcccacacctgc
cgcaagaccaccaagaagcaggccaagaagggtaaaacccccgaggaggtactgaagaaa
tacctgcagaaggtgcgacacccacccgatgaggactgcaccatctgcatggagcgcctc
tcggcaccctccggctacaaggggccccagcccgccatcaagcccgacctggtggggaag
ctggcgaaatgtggccacatcttccacctccactgcctggtggccatgtacaacaacggc
aacaaggatggcagcctgcagtgtccgacctgcaaaaccatctatggggtaaagacgggg
acgcagcccccggggaagatggagtatcacatcatccctcacgcgctgcccggccactcg
gactgcaaaaccatccgcatcatctacaacatccccccaggggtgcagggaccagagcat
ccaaacccggggaagagcttcactgcccgcggcttcccccggcactgctacctgcccgac
agcgagaagggcaggaaggtactgaagttgctgctggtggcctgggaccggcgcttgatc
tttgccatcgggacctcaagcaccacgggcgagtcggacacggtgatatggaacgagatc
caccacaagacagagtttggctccaacctcactggccacggctaccctgacatcaactac
ctggacaatgtcttggctgagctggcggcccagggcatcacggaggagagcctggcccag
gagaaggactga
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