Cygnus atratus (black swan): 118249879
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Entry
118249879 CDS
T09349
Symbol
ABCC8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X2
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
cata
Cygnus atratus (black swan)
Pathway
cata02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118249879 (ABCC8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cata02000
]
118249879 (ABCC8)
Transporters [BR:
cata02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
118249879 (ABCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_23
AAA_29
RsgA_GTPase
MMR_HSR1
AAA_25
nSTAND1
TMD0_ABC
AAA_15
TraD_N
DEAD
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
118249879
NCBI-ProteinID:
XP_035406262
LinkDB
All DBs
Position
5:complement(4881586..4962283)
Genome browser
AA seq
1594 aa
AA seq
DB search
MCAEAAAGCAQGPAMALAFCGDEGNSTAYNVDHGVLNNGCFVDALNVVPHVFLLFITFPI
LFIGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLFVLVCEIAEGIVSDGVSESRHLHL
YMPAGMAFLAAITSVVYYHNIETSNFPKLLIALLFYWTLAFITKTIKFVKFCDNGVGFSQ
LRFCLTGLLVVLYGMLLAVEINVIRVRRYVFFKSPKEVKPPEDLQDLGVRFLQPFVNLLS
KGTYWWMNTFIKTAHKKPIDLKTIGKLPIAMRALTNYIRLNEAFEAQKNKRSPSPQGSRS
IWRALCCAFGRPLLLSSTFRILADLLGFAGPLCISGIVHNVGKGNNTIRPQTKILGVFFI
SSQEFLSNAYVLAVLLFFALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMQLSTSN
MSMGEMTAGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVLLLYYLLGISALIGAAV
IIVLAPVQYFVATKLSQAQRSTLEYSNERLKKTNEMLRGIKLLKLYAWEHIFHSSVEETR
QKEMTSLKSFALYTSISIFMNAAIPIAAVLITFVVHAHLTRKADFSPSVAFASISLFHIL
VSPLFLLSSVVRSTVKALVSVQKLSEFLSSEEIGEEHDKCPELRSADNHSKYQAVPLKVV
NRKRPAREDWNNYSSHMRRPINITEADDFCVKITNGFFTWTPEGPPALSNIDIRIPQGQL
TMIVGQVGCGKSSLLLAILGEMQKISGNIFWSSCTSDSETGEDVSPEKESPVEMEFRKRG
SVAYASQKPWLLNATVEENITFESSFNKQRYKAVIDACSLQPDIDILPHGDQTQIGERGI
NLSGGQRQRISVARALYQQTNVVFLDDPFSALDIHLSDHLMQEGILKMLREDKRTVVLVT
HKLQYLPHADWIIAMKDGNIQREGTLKDIQKSETELFEHWKTLMNRQDQELEKETIIETK
TVLERTNLRRTMYSREALLKDDEEDEEEVTESDDEDNLSSVLHQRAKMPWRACGKYLSAA
GILLLPLLVLSQLLKHTVMVAIDYCLARWTSEAISEKTEVEMKNCSQCAIFDHSPYSKIF
SVLCCLGIVLCLVTSIAVEWTGLKVTKKLHSSLLNKIILAPMRFFETTPLGSILNRFSAD
CNTIDQHIPATLECLSRSTLLCVSALAVISYVTPMFLIALVPLAIMCYFIQKYFRVASRD
LQQLDDSTQLPLLSHFSETVEGLTTIRAFRYEAKFRQKLLEYTDSNNIASLFLTAANRWL
EVRMEYIGACVVLIAAVTSITSCLYRKLSSGLVGLGLTYALMVSNYLNWMVRNLADMEIQ
LGAVKRIHGLLKTEAENYEGLLSSSQIPQNWPDRGEIQIQNLSVRYDSNLKPVLKHVNAH
ISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGRIIIDGIDIAKLPLQTLRSRLSIILQD
PILFSGTIRFNLDPEKKCTDSMLWEALEIAQLKHVVKALPGGLDAIVTEGGENFSQGQRQ
LFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILNADL
VIVMKRGVILEYDKPEVLLEREDSVFASFVQADK
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcggaggcggcggcgggctgcgcgcagggtcccgccatggccctggctttctgc
ggcgacgagggcaactccaccgcctacaacgtggaccacggcgtgctcaacaacggctgc
ttcgtggacgcgctcaacgtggtgccgcacgtcttcctgctcttcatcaccttccccatc
ctcttcatcggatggggaagtcagagttccaaagtacatatccatcacagcacgtggctt
cattttcccggccacaacctacgctggatactaacttttatcctcttgtttgtgctggtg
tgtgaaatcgcagagggcatagtatctgatggggtttcagaatcccgtcatttacacctg
tacatgccggctgggatggcattcttggcagccatcacatctgttgtctattaccataat
atcgaaacatccaatttcccaaagttattgatcgcattgttattctactggactttagct
ttcataactaaaaccatcaaatttgtaaagttctgtgataatggggttggattttctcag
cttcgattttgcctcacgggactcctggttgttctatatggaatgctactagctgtagaa
ataaatgtcatcagggtgaggagatatgttttcttcaaaagtcctaaagaagttaaacct
cctgaggatctccaggaccttggtgttcgattcctacagccatttgtgaacctgttatcc
aaaggaacatattggtggatgaatacattcatcaagactgcccataaaaaaccaatagac
ttgaaaaccataggcaagcttcccattgccatgagagctctgaccaattatattcgcctt
aatgaggcttttgaagcacagaagaacaaaaggtcaccatctccacaaggatccagatca
atttggcgtgctctctgctgtgcttttggaagacccttgcttctcagcagcacattccgt
attctggctgacttgcttggatttgctggtcccctctgcatctctgggattgttcacaat
gttgggaaaggaaataacaccatccgcccacagactaaaattcttggtgttttctttatt
tcatctcaagagttcctgtccaatgcatatgttttggctgtactcctattttttgccctt
ctgttgcaaaggacatttctccaagcatcatactatgttgctattgaaacaggaattaac
ttgagaggtgcaatacagacaaaaatatacaacaaaattatgcagctttcaacttcaaac
atgtctatgggggagatgactgcaggccagatctgtaacctggttgccatagacacaaac
cagctgatgtggttctttttcctctgccctaacctttgggctatgccagtacagataatt
gtaggagttcttctgctctactatcttctaggaatcagtgccttaattggagcagcagta
atcatagtacttgcacctgttcagtactttgtagcaacaaaactgtcacaggcccagaga
agcacgttggagtactccaatgagagactgaagaaaacaaatgagatgcttcgaggcatt
aagctccttaaactctatgcttgggaacacatctttcacagcagtgtagaagaaaccaga
caaaaagaaatgactagcctaaagtcgtttgccctttatacctccatatccatctttatg
aatgcagcaataccaattgcagctgtacttataacatttgtggtccatgctcatctgaca
agaaaggctgacttctccccatctgtggcatttgcctccatctccctgtttcacattctt
gtgtctccgttgttcctgctctccagtgtggttagatccactgtcaaagcattagtaagt
gtgcagaaactgagtgaattcctgtcaagtgaagagattggagaagagcatgataaatgt
ccagagctaagaagtgcagataatcacagcaaataccaggcagtgccactcaaagttgtt
aaccgcaagaggcctgccagggaggactggaacaattacagctctcatatgagaagaccg
attaatatcacagaagcagatgatttttgtgtaaagatcacaaatggatttttcacttgg
acacctgaaggtcctccagcattgtccaacattgatatccgaatccctcaaggtcagcta
acgatgattgtaggacaggttggctgtggtaagtcatctctcttgctagccatacttggt
gagatgcagaagatctctggcaacatattctggagcagctgtacttctgacagcgagact
ggggaagatgtcagcccagagaaagaatctcctgttgagatggaattcaggaaaagagga
tcagtagcgtatgcatcacagaagccttggttgctcaacgcaacggtggaagagaatatc
acatttgaaagctcttttaacaaacagaggtacaaagcagtaattgatgcttgttccctc
cagcctgatattgacattctccctcacggagaccaaacccagattggagagaggggaatt
aatctgtctggagggcagcgccaacgtatcagtgtagcaagagcactttaccagcagaca
aatgttgtgttcctggatgatccattttctgcactggatatccacctaagtgaccatctc
atgcaagaaggaatactgaaaatgctacgggaagacaagcgcactgttgtgctagtaact
cacaagctgcagtacttgccccacgctgactggataattgcaatgaaggatggaaacatc
cagagagaaggaacactcaaggacattcagaaatctgagactgagctttttgaacactgg
aagacgctaatgaatcgacaagaccaagagctggagaaggagactataattgaaacaaaa
actgttctggaaagaacaaatctccggaggactatgtattcccgtgaagctctgctgaaa
gatgatgaagaagatgaagaagaagtaacagaaagtgatgatgaagacaacctgtcttct
gtgcttcatcagagagcaaagatgccctggagagcctgtggaaaatacctcagcgcggcg
ggaatcctccttctgccactgctggttctgtcccagctgctgaagcacacagtgatggtg
gccattgactactgcctggcgcgatggacctcagaggccatttctgagaaaacggaggta
gagatgaaaaactgctctcagtgtgcgattttcgaccattctccatattcaaaaattttc
agcgttctctgttgtcttggaattgtattatgtcttgtcacatccatagcagtggagtgg
actggcttgaaagtcaccaaaaagctgcactcttctttactaaataagataattttggca
ccaatgaggttttttgaaacaacacctctgggaagtatactcaacagattttcagctgat
tgcaacaccattgaccagcatatccctgctaccctggagtgcttgagtcgctccactttg
ctgtgtgtatctgctcttgctgtaatttcatacgtcacaccgatgtttctcattgccctg
gttccccttgcaatcatgtgttacttcatacagaagtacttccgagtcgcatcacgggat
ctgcagcagctggatgacagcactcagctaccactactttcccatttttcagagactgtt
gaaggtctgaccaccatccgagccttcaggtatgaagctaaatttcgacaaaagcttctt
gaatacacagattccaacaacattgcttcccttttccttacagctgctaatcgatggcta
gaagttcgcatggagtacattggagcatgtgtggtactcatagcagctgtcacttctatt
accagttgcctgtatagaaaactctcttcaggacttgtaggcttgggactaacctatgct
cttatggtgtctaactatctgaattggatggttcgtaacctggctgatatggagatccag
ctgggtgcagtgaaaagaatccatggccttctcaaaacagaagctgaaaattatgaaggg
ctcctttcttcctcacagattccccagaactggccagacagaggcgagatccaaatccag
aacctcagtgtccgatatgacagcaacttaaagccagtgctaaagcatgtcaatgcccac
atttctccaggacaaaagattgggatctgcggccgaacaggcagtggaaaatcttccttc
tctcttgcatttttcagaatggttgacacgtttgagggaagaattatcattgatggtata
gatatcgctaagctccccttacagacgttgagatccaggctgtcaatcattctccaagat
cctattttattcagtggaacaatccggtttaacttggacccggagaagaagtgcactgac
agcatgctgtgggaagcactggaaatagcacagctcaagcatgtggtgaaagcgctacct
gggggcctagatgctatagtcacagaagggggtgaaaattttagccagggccaaagacag
ctgttctgcttagcaagggcttttgtgcggaagactagcatcttcatcatggatgaagcc
acagcatctattgacatggcaacggagaacatcctccagaaggtagtcatgactgcattt
gctgaccgtactgtggttacaatagcacaccgcgtgcacacgatcctgaatgcagatttg
gttattgtaatgaagagaggggttattttggaatacgacaagcctgaggttctgctagaa
cgagaagacagtgtatttgcttcttttgtacaagcagataagtag
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integrated database retrieval system
