Cygnus atratus (black swan): 118250018
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Entry
118250018 CDS
T09349
Symbol
IRX4
Name
(RefSeq) iroquois-class homeodomain protein IRX-4
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118250018 (IRX4)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
118250018 (IRX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MCM_bind
Motif
Other DBs
NCBI-GeneID:
118250018
NCBI-ProteinID:
XP_035406495
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All DBs
Position
2:complement(92966121..92969940)
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AA seq
492 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMSTNSLTTCCESGGRTLAETGAAASAQTPVYCPVYESRLLATA
RHELNSAAALGVYGGPYAGPQGYGNYVTYGTEAPAFYSLNSLEAKDGGGSAHAGIAPATA
YYPYDHTLSQYQYDRYGGMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRPYEEEEEEEEGSQEDTMMKNEK
AEEPTGKEEKELELSDLEDLDAAESESSECEMRRPFPHPLPHPHPLPGGGPPPRAAEPPA
KLPLPTAVDEEEEEEAERARSCLKPAAEECEAALLGARPRGCEPKMCFPQGQQLLEAKPR
IWSLAQTATSLNQAEYPSCMLKRQGGSAATAVSTPVNVIDRHQDSPVTNLRNWVDGVFHD
PLFRHSTLNQALSNTTVSWATTKGAILETGALGRSVGNGANVLKGQLSNLAHHDSSKEFI
AFPKAGSKMFCS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcctcagtttggctacccttactcctctgcaccccagttcctgatgagcacc
aactccctgacgacctgctgcgagtccggcggccggacgctggccgagacgggggcggcc
gcctccgcgcagaccccggtctattgtcctgtgtacgagagccgcctgctcgccaccgcc
cgccacgagctcaactccgccgccgccctgggggtctatggcggcccctacgccggcccc
cagggctatggaaactacgtgacctacggcaccgaggctcccgctttctactccctgaac
agtttggaggcgaaggacggcggcggctctgcgcatgcgggcatcgccccggcgactgcc
tactacccctacgatcacaccctcagccagtaccagtacgacaggtacggcgggatggac
ggcgggacgcggcggaaaaacgccacccgggagaccaccagcacgctgaaggcctggctg
caggagcaccgcaagaacccctaccccaccaagggcgagaagatcatgctggccatcatc
accaagatgaccctcacccaggtctctacctggttcgccaacgcccgccggcggctcaag
aaagagaacaagatgacctggcctccgcggaacaagtgctcggacgagaagcggccctac
gaggaagaggaggaggaggaggagggctcgcaggaagacacgatgatgaagaacgagaaa
gccgaggagcccacgggcaaggaggagaaggagctggagctcagcgacctggaggacttg
gacgccgccgagtcggagagctccgagtgcgagatgaggcggcccttcccgcacccgctg
ccgcatccgcacccgctgccgggcggcggccccccgccccgcgccgccgagccccccgcc
aagctgccgctgccgaccgccgtcgacgaagaggaagaggaggaggcggagagggcccgc
agctgcctgaagccggcggccgaggagtgcgaggcggccctgctcggcgcccggccccgc
ggctgcgagcccaaaatgtgcttcccgcagggacagcagctgctggaggcgaagcccagg
atttggtccctggcgcagaccgccacctccctcaaccaggccgagtacccctcatgcatg
ctgaagcggcaggggggctcggctgccactgctgtctccaccccggtcaatgtcatcgac
aggcaccaggattcaccggtcaccaacctcaggaactgggtggacggggtgtttcacgac
cccctgttcaggcacagtactttgaaccaagccttgagcaacaccacagtgtcctgggct
accaccaaaggagccattctggaaacgggcgccttgggacgctcggtaggcaacggcgcc
aacgtgctcaaggggcagctgtcaaacctggcccaccacgactcgagcaaggagtttatt
gcgtttcccaaagcaggaagcaaaatgttttgctcttaa
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