Cygnus atratus (black swan): 118250061
Help
Entry
118250061 CDS
T09349
Symbol
SMC1B
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04110
Cell cycle
cata04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118250061 (SMC1B)
04114 Oocyte meiosis
118250061 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118250061 (SMC1B)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
118250061 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
118250061 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
118250061
NCBI-ProteinID:
XP_035406583
LinkDB
All DBs
Position
1:72868148..72905567
Genome browser
AA seq
1233 aa
AA seq
DB search
MGYLKLLVMKDFKSWRGEQVIGPFMRFNCIIGPNGAGKSNIMDAVSFVMCEKISNLRVKS
VRELIHGAHVGKPVSSTASVKIVYCEEDGEEKTFSRVIRGTCSEFIFNDKTVTRSTYISE
LEKIGILVKARNCLIFQGTVELIAMKKPKERTQLFEQISNSWQYAEEYERKKKKMEQAEE
DAHFNYNKKKSVAAERKQAKMEKEEADHYQMLIKEIHENRIQLQLFQLYHNEKNIDFLKK
SLDEKNMEASIKKDSLATAEDEFRAKKKVLGVLNRDQQHMEGEIKTLQVSLVQHRALYIK
AKENTSYQIKKVEMSKKSLRDKEKYCDKEKQNMKDLEIELYETEKAWREFEKKTKEEILQ
RAADIELRESQLEHYKELKEIARRKVATLTQQLEKLRWEQKADQERMKLNRRKKKEVEEN
IKQTVERIGEHKRRIEKLEEYTKICTESLAEKKHQKETLTKEIENSTIRMAEVNEELNKI
VGELQNAKIDYHEGKRQQMRAEILESLRRLYPDSVFGRLLDLCHPIHKKYQLAVTKVFSK
YMTAIVVATEKTARDCIRFLKQERAEPETFLALDYLDVKPINEKLREIKGAKMLVDVVQT
PFAPLKKVIQFVSGNGLVCETVKEARQIAFDGPVRLKTVALDGTLFXKSGVISGGSSDLR
FKARCWDDKEINKMKERRESLINELKDLMKIKRKETDLKQLHAQSHGTQTRLKYSQTELD
LIKKKHLANLYMEKSKLESELVNTESQHDMINEGVLQRELKIEEFQKKINEAEDAVFKEF
CEEIGVENIRVYEQEHVRQQEEIDRRRLEFENQKTRLNVQLEYNRDHLQKLIDTVSKLRQ
TIQKDELEITGLLKDEEKHLKRVNEIVEEEQRLKDTLSAHKSEIMKTQSEVEEFRKKLLT
LNREAAKLQKEAAAIETSLEDKRLRRHNMLLECKVQDLKINLLFGSLDDISEVELGTETE
GTQTTTIYDREEAIKIDYSGLANDLKDLESDEEIEAHLNQMQQEIKSKESTLMKTAAPNL
RALEKLQIARDKFQESMDAFETSRKEARISKQEFEQVKKRRYELFSQCFEHASIAIDQIY
KKLCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVAALALIFAIH
SFRPAPFFILDEIDAALDNTNIDKVSSFIREQAREQFQMIVISLKEEFYSKADALIGVCL
EHDNGMFSQVLTLDLTEYPDDQEEREKYIQSSL
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggatacctgaagctgctggtgatgaaggacttcaagtcctggcggggggagcaggtc
atcggccccttcatgaggttcaactgcatcattgggcccaacggagcaggaaaatctaac
ataatggatgctgttagttttgtgatgtgtgaaaagatatctaacttgcgagttaaaagt
gttcgagaacttattcatggagcacatgttggaaaaccagtttcttctacagcaagcgta
aagatagtatattgtgaagaagatggggaagaaaaaacattttcaagagttatccgtggt
acttgttctgaatttattttcaatgataaaacagtcacccgatctacgtacatatctgag
cttgaaaaaataggcatacttgtcaaagctaggaattgtcttatttttcagggaacagta
gaattgattgcaatgaagaagccaaaggaaagaactcaactttttgaacaaatcagtaat
tcatggcaatatgctgaggaatatgaaagaaaaaagaaaaaaatggagcaagcagaagag
gatgcacactttaattataacaagaaaaaaagtgttgcagcagaacgcaaacaagcaaag
atggaaaaagaggaggcagatcattaccagatgctcatcaaggaaatacatgaaaacagg
atacagctacagcttttccagctttatcacaatgaaaaaaacatcgactttctgaaaaaa
agtctggatgaaaagaatatggaggctagtatcaagaaagattcccttgctacagcggaa
gatgaatttagagccaagaaaaaagtgcttggtgtactaaatagagatcaacaacacatg
gaaggagaaattaagactcttcaagtgtcactggttcagcatagagccctctatataaaa
gcaaaagaaaacacttcctaccaaatcaagaaagtagaaatgtctaaaaaatctctgagg
gacaaggagaaatactgtgataaggaaaagcagaatatgaaagacctggagatagaactg
tatgaaactgagaaggcatggagagaatttgagaagaaaactaaagaggagatactgcag
agagcagcagatattgagctgagagaaagtcagttggagcactataaagagctaaaggaa
atagcaagaaggaaagtggctacactaacccagcagctagaaaaacttcggtgggagcaa
aaagcggatcaagaaaggatgaaacttaataggagaaagaaaaaagaagttgaggaaaac
attaaacagactgtggaacggataggagagcataaaagacgaatagagaagttggaagag
tataccaagatatgcactgagtcattggcagagaaaaaacaccagaaagaaacgcttact
aaggaaatagaaaattcaacaatacgaatggctgaagtgaatgaagaattgaacaaaata
gttggtgaactgcaaaatgccaagattgattaccacgaaggaaagcgtcagcaaatgaga
gcagagatcctggaaagtctcagaagactgtatccagattctgtgtttggaagactgctt
gacttgtgccaccctattcataaaaaataccagcttgctgttaccaaagtgttcagcaaa
tacatgactgctattgttgttgccacggaaaaaacagcaagagattgcattcggttccta
aaacaagaacgagctgaacccgaaacttttcttgctttggattaccttgatgttaagcca
attaatgagaagttaagagagataaaaggagctaaaatgctggtggatgttgtacaaact
ccatttgctccactgaaaaaagtaattcagtttgtgagtgggaatggcttggtctgtgaa
acagttaaagaagcaagacaaatagcatttgatggaccagtgaggttgaaaacagtggca
cttgatggaactttatttntgaaatctggagtgatttctggaggatcaagcgatttaaga
tttaaagccagatgttgggatgataaagaaataaataaaatgaaagaaagaagagagagc
ttgattaatgaactaaaggacttaatgaagatcaaacgtaaggagactgatttgaagcag
ttgcatgctcagtctcatggaactcagacacggcttaaatattcacagactgaattagac
cttattaaaaagaaacatcttgctaatctctacatggagaaatcaaagctggaaagtgaa
ctagtaaatactgagtctcagcatgatatgataaatgaaggagtactacagagagaatta
aaaatagaagaatttcagaagaaaatcaatgaggctgaagatgctgttttcaaggaattc
tgtgaagaaattggcgtagaaaatatacgtgtgtatgaacaagaacacgtgagacagcaa
gaggagatcgatagaagaagactggagtttgaaaatcagaagacacgactaaatgttcag
ctggaatataatcgtgatcatctacagaaattaatagacacagtcagcaagttgaggcaa
acaattcaaaaagatgaattggagattactgggctacttaaggatgaggaaaagcatcta
aaaagggtgaacgaaattgtggaggaggagcaacgtcttaaggatacattaagtgctcat
aaatctgagattatgaaaacccaaagtgaagttgaagagttcagaaagaagttgttaact
cttaatagggaagctgcaaaattacaaaaggaagctgcagctatagaaacctcattggaa
gataaaagattaaggagacataatatgcttcttgagtgcaaggtgcaggacttgaaaata
aatctcctatttggatcactggatgatatcagcgaagtagagctaggaactgaaacagaa
ggcactcagactacaactatctatgacagggaagaggcaattaagatagactacagtggc
ctagcaaatgacctgaaggacctggagtctgatgaagagatagaggctcatctgaaccag
atgcagcaggaaataaaatctaaagagagtactttaatgaagacagctgctccaaacctg
agagcattggagaaattacagatagctcgggacaagttccaagaatcaatggatgctttt
gagaccagcagaaaggaggccagaatatccaagcaagaatttgaacaggtgaaaaaaagg
agatacgagctttttagccagtgctttgagcatgcctccatagctattgatcagatctac
aaaaaactttgcagaaacagtagtgctcaggcattccttagtcctgaaaatcccgaggag
ccttatctggaaggcattggctttaactgcgtggctccaggaaagcgctttatgccaatg
gacagtttgtcaggaggagaaaaaactgtggcagctctggctcttatatttgctatacac
agttttcggccagcacctttttttattttagatgagatagatgctgccctggataacaca
aacattgataaagtatcaagtttcattagggagcaggcacgtgaacagtttcaaatgata
gttatttctctgaaggaagagttttattccaaagcagatgcattgattggagtgtgtcta
gagcatgataacggtatgttcagtcaggtactgactttggatcttaccgagtatccagat
gaccaagaagaaagggagaaatacatacaaagttctttataa
DBGET
integrated database retrieval system
