Cygnus atratus (black swan): 118250074
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Entry
118250074 CDS
T09349
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118250074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cata02000
]
118250074
Transporters [BR:
cata02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
118250074
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
118250074
NCBI-ProteinID:
XP_035406597
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Position
1:complement(64418833..64439810)
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AA seq
599 aa
AA seq
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MGKMDNTSVELSSPSEVKQAALEESEPIAPEALSTKKKKDIPDRGSWKGRFDFLLSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFLTLVFAGIPLFLLETALGQYTSVGGLGVWKLAP
MFKGVGLAAVVLSFWLNIYYIVIIAWSLYYLFNSFTADLPWQSCGNAWNTERCFSNYSLE
DTTNLTSAVTEFWERNMHQMSGGLGEPGSIRWPLAGTLALAWLLVYFSIWKGVEWTGKVV
YFSATYPYFMLFILFFRGVTLPGAKEGILFYLTPDFRKLSDSEVWMDAATQIFFSYGLGL
GSLIALGSYNTFHNNVYRDSIIVCCINSTTSIFAGFVIFSIVGFMSHITKKSISELASSG
PGLAFLAYPQVVTQLPLSPLWSILFFSMLMMLGLDSQFCTVEGFITALMDEYPHVLRARK
KVFIAIVCFISYLIGFSNITQGGIYVFKLFDYYSASGMCLLFLVFFETISISWCYGVNRF
YRNIEEMIGYKPCIWWKICWAFFTPLVCLGVFFFSVVEMTPLTLGKYVYPAWGQGIGWLM
ALSSMVLIPGYMLYCFFTSTGTLQQRLQQMTQPQPEAQVQENGLQPKMSLNGRVSDATV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatggacaacacctccgtggagctgagctctccctccgaggtgaagcaggca
gccctggaggagtcggagcccattgcccctgaagccttgagcaccaagaagaagaaggat
atcccagacaggggctcctggaaggggagatttgacttcttgctgtcctgcgtgggctat
gccattgggctgggcaatgtctggcgcttcccctatctctgcggcaagaacggaggaggg
gccttcctcattccctatttcctgacgctggtgtttgctgggattcccctcttcctgctg
gaaactgctcttggccagtatacctctgtgggtggactgggggtctggaaattagcaccc
atgtttaaaggagtggggctggcagctgtggttctctccttctggctgaacatctactac
attgtcatcatcgcctggtctctctactatctcttcaattctttcactgcggacctgccg
tggcagagctgcgggaacgcctggaacactgaacgctgcttctccaactactccctggag
gacaccaccaacctcaccagtgccgtcaccgagttctgggagaggaacatgcaccagatg
tctgggggcctgggggagcccggctccatccgctggcctctggccggcacgctggccctg
gcctggctgctggtctacttctccatctggaagggcgtggagtggacaggcaaggtggtg
tatttctcagccacctacccctacttcatgctcttcatcctcttcttccggggagtcaca
ctgccaggggccaaggagggtatcctcttctacctcacgcctgacttcagaaagctctct
gactccgaggtctggatggatgcggccacacagatcttcttctcctacggcctggggctg
gggtccctaatcgcactggggagctacaacactttccataacaatgtctacagagactct
attattgtctgctgtataaactccacaacaagcatattcgctggatttgttattttctct
atcgttggcttcatgtcgcacatcacgaagaagtccatctcagagctggcctcctcaggc
cccggactggctttccttgcctacccacaagtggtcacacagctacccctgtccccgctc
tggtccatcctcttcttctctatgttgatgatgctgggcctggatagtcagttctgcacc
gtggaggggttcattacagccctgatggatgaatatcctcacgtcctgagagccaggaag
aaggtcttcattgcgatagtctgtttcatctcttacctcattggattctccaacatcacc
cagggtggcatttatgtcttcaagctctttgattactactcagccagtggcatgtgcctt
ctctttcttgtcttctttgagaccatctcaatttcttggtgttatggtgtgaacagattt
tacaggaacatcgaagaaatgattggctacaaaccttgcatctggtggaagatctgctgg
gccttcttcactcctcttgtatgcctgggtgtgttcttcttcagcgtggtggaaatgacc
cctctgacactgggaaaatacgtctatcctgcgtgggggcaaggcattggctggctcatg
gccctgtcctccatggtgctgattccaggatacatgctgtactgtttcttcacctcaaca
gggactctccagcagcgtttgcagcagatgacgcagccccagcccgaggcgcaggtacag
gagaacggcctccagccgaagatgtccttgaacgggagggtctcggatgccaccgtctag
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