Cygnus atratus (black swan): 118250213
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Entry
118250213 CDS
T09349
Symbol
MNAT1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03022
Basal transcription factors
cata03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118250213 (MNAT1)
09124 Replication and repair
03420 Nucleotide excision repair
118250213 (MNAT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cata03021
]
118250213 (MNAT1)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118250213 (MNAT1)
Transcription machinery [BR:
cata03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118250213 (MNAT1)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118250213 (MNAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
DUF3292
zf-UDP
LMBR1
Motif
Other DBs
NCBI-GeneID:
118250213
NCBI-ProteinID:
XP_035406994
LinkDB
All DBs
Position
5:complement(59512960..59636822)
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVELLFVRGAGNCHECDTPLRKSNFRV
QLFEDPAVDKEVEIRKKVLKIYNKREDDFPSLSEYNDFLEEIEEIVFNLTNNVDLENTKK
KMELYQKDNKEVIQKNKIKLTREQEELEEALEVERQENEQRRLLVQKEEQLQQMIKRKNK
QALLDELESSSLPASLLLAQHKDRSTQLEMQLEKPKPVKPVTFSTGIKMGQHISLAPMQK
LEEALYEYQPLQVETYGPQVPELEMLGRLGYLNHVRAASSQDLAGGYTSSLACHRALQDA
FSGLFWHPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccagggctgcccgcggtgcaagaccaccaagtaccgcaacccctccctgaag
ctcatggtcaacgtctgcggccacacgctatgcgagagctgcgtggagctgctgtttgta
agaggggctgggaactgccacgagtgcgatacccccctgcggaaaagtaacttcagggta
cagctctttgaggatcctgctgttgacaaggaagtggaaattcgtaagaaggtgctgaaa
atatacaataaaagagaggatgactttcccagtctaagtgaatataatgatttcctggaa
gaaatagaagaaattgtatttaacttgactaacaatgtggatttggagaacaccaaaaag
aaaatggagctgtaccagaaggataacaaagaagtcattcagaaaaacaagataaaactg
acgcgggagcaggaggaattggaggaagctttagaggtggaacgacaagaaaatgaacaa
aggcgactgcttgtacagaaggaagaacaactacaacagatgataaaaaggaagaataaa
caggcactcttggatgaactggagagctccagccttcctgcttcgctgcttttagctcag
cataaggacagatctactcagctagaaatgcaactggaaaaacccaaacctgtcaaacca
gtcacgttttccactggcatcaaaatgggtcagcatatttcgttagctcccatgcaaaag
ctagaggaagctttgtacgagtatcaacctctgcaagtggagacatatggaccacaagtt
ccagagcttgaaatgctgggaaggctggggtatctcaaccacgtacgagccgcctcttcg
caggatcttgctgggggctacacttcttccctggcgtgtcaccgagccctacaggatgct
ttcagtggtctcttctggcaccccagttag
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