KEGG   Cygnus atratus (black swan): 118250388
Entry
118250388         CDS       T09349                                 
Symbol
EXOSC9
Name
(RefSeq) exosome complex component RRP45
  KO
K03678  exosome complex component RRP45
Organism
cata  Cygnus atratus (black swan)
Pathway
cata03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cata00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    118250388 (EXOSC9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cata03019]
    118250388 (EXOSC9)
Messenger RNA biogenesis [BR:cata03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     118250388 (EXOSC9)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 118250388
NCBI-ProteinID: XP_035407343
EnsemblRapid: ENSACYG00000003347
LinkDB
Position
4:complement(43973357..43979004)
AA seq 467 aa
MTPRRCATNGRASRLNGRASRLNGRSAMREPPLSNCERRFLLRAVREGKRLDGRQCYDYR
NVRISFGPDRGCCVVELGRTRVLGQVSCELVPPKPNRATEGILFFNLELSPMAAPGFEPG
RQSELLVKLNRLIERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAA
IVALCHFRRPDVSVQGEEVTVYSPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPSERE
ERVMDGLLVIAMNKHREICTIQSSGGIMLLKDQVLRCSKITAVKVAEITELIQKALENDQ
KVRKEGGKFGFAESIPNQKITAFKMESAAVDTNNVEEQAEEIITKADPPSEVFATPILHT
PGTAQIGEGIENSWGDLEESEREEAVEEEGEIDAAAFECQRMETEDTSTISKAKDEPIVL
SDSEEEEVVILEPQEIPNKTRTQTTLKQENTSKKAFNKRRRKKRAAR
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgacgccaaggcgctgcgccaccaacggccgggcctcgcgactcaacggccgcgcctcg
cgactcaacggccgctccgccatgagggagccgccgctgtccaactgcgagcggcgcttc
ttgctgcgcgccgtgcgggagggcaagcggctggacgggcggcagtgctacgactaccgg
aacgtgcgcatctccttcgggcccgaccgcggctgctgcgtggtggagctgggcaggacc
agggttcttggccaagtatcatgtgaacttgtgcccccaaagccaaatcgggctacagaa
gggatactgttctttaaccttgagctgtcacccatggctgcgcctggttttgagcctggc
aggcagtctgagttactggtgaaactgaacagattaatagagcgatgcctgagaaattcc
aaatgtatagatactgaatctctctgcgttgttgctggtgaaaaggtttggcaaatccgt
gtggacctgcacctgttaaatcacgacggtaacattattgatgctgctagcatagcagca
atagtagccctgtgtcattttcgcagaccagatgtctctgtgcaaggagaggaagtgaca
gtgtattctcctgaggagcgtgatcctgtccccttgagtatccaccacatgcctatttgc
gtcagttttgccttcttccagcaggggacatatttgttggtggatccaagcgaacgagaa
gaacgtgtaatggacggcctccttgtaattgcaatgaataaacatcgtgaaatttgtacc
atccagtccagtggagggattatgctactaaaggatcaggttctgagatgcagtaaaata
acagctgttaaggttgctgaaataacagaactaattcagaaagccttggagaacgaccag
aaagttaggaaagaaggcgggaagttcggctttgcagaatctataccaaatcaaaagatc
actgccttcaaaatggaaagtgctgctgtagacaccaacaacgtggaagaacaagcagaa
gaaatcataactaaagctgaccctccttcagaagtttttgccacaccaatattgcacact
cctgggacagcccaaattggggaaggaatagagaactcctggggagaccttgaagaatcg
gagagggaagaggcagtggaagaggagggtgaaattgatgctgccgcttttgaatgccag
agaatggaaacagaggacacaagtacaataagcaaagctaaggatgaacctattgtgctg
tctgacagtgaagaggaagaagttgtcatcctggaaccgcaggaaataccaaacaaaaca
agaacacagaccaccttgaaacaagaaaatacaagtaagaaagcatttaacaaaaggagg
agaaagaagagagctgctcgttag

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