Cygnus atratus (black swan): 118250388
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Entry
118250388 CDS
T09349
Symbol
EXOSC9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118250388 (EXOSC9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118250388 (EXOSC9)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118250388 (EXOSC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
118250388
NCBI-ProteinID:
XP_035407343
EnsemblRapid:
ENSACYG00000003347
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All DBs
Position
4:complement(43973357..43979004)
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AA seq
467 aa
AA seq
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MTPRRCATNGRASRLNGRASRLNGRSAMREPPLSNCERRFLLRAVREGKRLDGRQCYDYR
NVRISFGPDRGCCVVELGRTRVLGQVSCELVPPKPNRATEGILFFNLELSPMAAPGFEPG
RQSELLVKLNRLIERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAA
IVALCHFRRPDVSVQGEEVTVYSPEERDPVPLSIHHMPICVSFAFFQQGTYLLVDPSERE
ERVMDGLLVIAMNKHREICTIQSSGGIMLLKDQVLRCSKITAVKVAEITELIQKALENDQ
KVRKEGGKFGFAESIPNQKITAFKMESAAVDTNNVEEQAEEIITKADPPSEVFATPILHT
PGTAQIGEGIENSWGDLEESEREEAVEEEGEIDAAAFECQRMETEDTSTISKAKDEPIVL
SDSEEEEVVILEPQEIPNKTRTQTTLKQENTSKKAFNKRRRKKRAAR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacgccaaggcgctgcgccaccaacggccgggcctcgcgactcaacggccgcgcctcg
cgactcaacggccgctccgccatgagggagccgccgctgtccaactgcgagcggcgcttc
ttgctgcgcgccgtgcgggagggcaagcggctggacgggcggcagtgctacgactaccgg
aacgtgcgcatctccttcgggcccgaccgcggctgctgcgtggtggagctgggcaggacc
agggttcttggccaagtatcatgtgaacttgtgcccccaaagccaaatcgggctacagaa
gggatactgttctttaaccttgagctgtcacccatggctgcgcctggttttgagcctggc
aggcagtctgagttactggtgaaactgaacagattaatagagcgatgcctgagaaattcc
aaatgtatagatactgaatctctctgcgttgttgctggtgaaaaggtttggcaaatccgt
gtggacctgcacctgttaaatcacgacggtaacattattgatgctgctagcatagcagca
atagtagccctgtgtcattttcgcagaccagatgtctctgtgcaaggagaggaagtgaca
gtgtattctcctgaggagcgtgatcctgtccccttgagtatccaccacatgcctatttgc
gtcagttttgccttcttccagcaggggacatatttgttggtggatccaagcgaacgagaa
gaacgtgtaatggacggcctccttgtaattgcaatgaataaacatcgtgaaatttgtacc
atccagtccagtggagggattatgctactaaaggatcaggttctgagatgcagtaaaata
acagctgttaaggttgctgaaataacagaactaattcagaaagccttggagaacgaccag
aaagttaggaaagaaggcgggaagttcggctttgcagaatctataccaaatcaaaagatc
actgccttcaaaatggaaagtgctgctgtagacaccaacaacgtggaagaacaagcagaa
gaaatcataactaaagctgaccctccttcagaagtttttgccacaccaatattgcacact
cctgggacagcccaaattggggaaggaatagagaactcctggggagaccttgaagaatcg
gagagggaagaggcagtggaagaggagggtgaaattgatgctgccgcttttgaatgccag
agaatggaaacagaggacacaagtacaataagcaaagctaaggatgaacctattgtgctg
tctgacagtgaagaggaagaagttgtcatcctggaaccgcaggaaataccaaacaaaaca
agaacacagaccaccttgaaacaagaaaatacaagtaagaaagcatttaacaaaaggagg
agaaagaagagagctgctcgttag
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