Cygnus atratus (black swan): 118250471
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Entry
118250471 CDS
T09349
Symbol
PDGFB
Name
(RefSeq) platelet-derived growth factor subunit B
KO
K17386
platelet-derived growth factor subunit B
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04010
MAPK signaling pathway
cata04020
Calcium signaling pathway
cata04510
Focal adhesion
cata04540
Gap junction
cata04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118250471 (PDGFB)
04020 Calcium signaling pathway
118250471 (PDGFB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118250471 (PDGFB)
04540 Gap junction
118250471 (PDGFB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118250471 (PDGFB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cata04052
]
118250471 (PDGFB)
00536 Glycosaminoglycan binding proteins [BR:
cata00536
]
118250471 (PDGFB)
Cytokines and neuropeptides [BR:
cata04052
]
Cytokines
Growth factors (RTK binding)
118250471 (PDGFB)
Glycosaminoglycan binding proteins [BR:
cata00536
]
Heparan sulfate / Heparin
Growth factors/receptors
118250471 (PDGFB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
118250471
NCBI-ProteinID:
XP_035407540
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Position
1:54577031..54594819
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AA seq
251 aa
AA seq
DB search
MCPQPAGPEAGMNFGVLLAFVLSLPLARLEGDPIPEDIYEILGDSSVRSISDLQRALRID
SVEEDSSSLDLNATHPGPNPASLARGRRSLDALAAAEPAVLAECKTRAVVFEISRTMVDS
TNANFVVWPPCVEVQRCSGCCNNRNVQCRPMQIRVRHVQVNKIEFVQKKPKFKKVVVPLE
DHVQCRCEAVSRPPPRSSRPAPREQKRLSPSFTTAAVSQRKRVRRPPAQKRKHKKYKHVN
DKKVLKEILVA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccgcagccggcggggcctgaagccgggatgaatttcggcgtgctcttggcgttc
gtcctctccctgcccctggcccgcctggagggggaccccatacccgaagacatttatgag
attttgggtgacagctcagtgcgctccatcagcgacctccagcgtgccctgcggatagac
tccgtagaggaggatagctccagcctggacctgaatgcaactcatcccggtccaaacccc
gcgtccctggctcgagggagacgaagcctggatgctctggcagcggcagagccagctgtc
ctcgcggagtgcaagacgcgggcggtggtcttcgaaatctcccgcaccatggtggacagc
accaacgccaacttcgtggtgtggccgccctgcgtggaggtgcagcgctgctccggctgc
tgcaacaaccgcaacgtgcagtgtcgccccatgcagatccgcgtccggcacgtccaggtg
aacaagatcgaatttgtccagaagaagccaaaattcaaaaaagtcgtcgtgcctttggag
gatcacgtgcagtgccggtgtgaagcggtgtcccgcccgccccccaggagcagccggcca
gcgccacgtgagcagaaacgcttgtcaccgtcgttcaccacagccgctgtctcgcagagg
aagcgggtacgccggccgccagcacagaagagaaaacataagaagtacaagcatgtcaac
gataagaaagtgctgaaagaaatcctcgtagcatag
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