Cygnus atratus (black swan): 118250486
Help
Entry
118250486 CDS
T09349
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cata03009
]
118250486 (UTP20)
Ribosome biogenesis [BR:
cata03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118250486 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
118250486
NCBI-ProteinID:
XP_035407565
LinkDB
All DBs
Position
1:complement(45157264..45221493)
Genome browser
AA seq
2799 aa
AA seq
DB search
MPGKPSAPKSGNTHRFLTFSERLSNVNIDIIHRIDRTGSYAEEVETYFFEGLQKWRELNL
TQHFVQFYKEVANKCQSFNQLVYYQSTVVQSLKTHLQVKGSLAYQPLLDLVVQLARDLQA
DFYPHFHDFFLAITNLLDTQDTELLEWAFTSLSYLYKYLWRLMVKDISNIYSLYSTLLAH
HKLHIRNFAAESFVFLMRKVSDKNALFNLMFRDLGKHPEKVEGVGQLLFEMCKGVRNMFH
SCAETAVKLILVKLGPVTEEEIELPWVTVGEAFEQMIRSAAVHIHKEHFDTVFKCLEESL
LDLQSKITKANCSMASEQMERILQAYLILLEHANGSKVSLPEEVCQVLIKMLQTSDLLPS
CCKTLLNAISALLLAENVFLPDSLTKEAIEKVFASEFEWRLLLDFSETMFTMKQFERHFL
PCFLKYIEHCFSSTDALVKDEAMAILAKLILVKAEPPTIGSMAFEKYPLVFTESSISSNT
RQQTSKRQGGKAKVPVLDHVLSLIQLPENEVITDLSQPWVALVILPHIRPMDKEIILPSV
TSFIGCLFAAIDKGTLCKGSLFVACQAVSTLLSLAESSEILHLLPVERVKNLVTAFPSDP
SALLLADLYYTRLALCGCQEPLSQGNLMELFEKLQPNISTGISKVRLLTVRILNHFENPP
STVIESDGTGELQSVFAILLQAELVPATVNDYREKLLHLRKLRCDVVQSTIPSGSLQEVP
LRYLLGMLYINFSPLWDPVIELITSHAKEMENKQFWKVFYEHLERAAVYAEMELQNELDE
QEESIAETESEKMPEGGVGTVFLERLRTRTDCSERLDHTNFRFLLWKALDKFPDRVEPRS
RELSPLLLRFIRNEYYPADSLVAPTQDLRKKTSGAVAAKELSNEEVNDVTMEEEEEEKEE
GEPITVGLPKKKTRRAAAKQLIAHLQVFSKFSNPRALYLEQKLNALYTQLLSHQDQNVQR
IALDCIMTYKHPHLLPYRENLQRLLEDKSFKEEIVHFSISEENAVVKMEHRPYLIPVLMR
ILYGRMRNKTGSKTQGKSSAGTRMSIVLRFLAGSLPEEIRMFLDLLFEAVKQFSNGPCQT
AVLRSMSELDLAKVLPLGRQHSLFNGLEVVLKNMGHLISQYLPEILQIMLCMTAVVSCIL
QQREKVQPRLINPLKNLRRLGLKLVVEFFSDYETYSFSVEEIDAVFHAVVWPQVCRLASE
SQYSPTFLLKLIHTWSKNPRYFPLLAKQHPERPECDILSNVFAVLSAKNLSEATSNLVMD
IADSLLNSPNFEPTEQVSSLNVTDCVVMDTGEVMEETISLGCRLVLPHVPAILQYFSKTM
LNVEKVKKKKYRAQVSKELNILSKISKFIQEKSQNSVLVSLLLPFLHQSNMEQDAEIDIL
ETVQNLLRHCSNPASFLKPLAKLFSVIQNKLSRQKLCLVFQTLSDLDSGLKYITDVVKLN
AFDQRHLDDINFDVRLSAFQSITAHIKEMQAVDINFLIPVMHNCFYTIQLGDMALSDNAS
LCLTSFIHRLAEIDHTEDDYKELIQHTLLESVRRGLKSKTENIQQDYTSLLSCLIQTFPA
NPEFRDLVQLTNCHDPDMDFFENMKHMQIHRRARALRKLAKQLTEKKLVLSSKSLQNYIM
PYATTAIFSEKMLKHENMVTASVEVVGAVCRHLSWSAYLYHLKHFIHVLQTGQINPKLGV
SLLETVLEAFHFDHETLEKQLVTIENHEAADMDIEPVVEGEEAMELEQSEGEEERVEENK
GENIPEEPTEPALVQPEQAAETAEDTEQVARPVSFLPRNKEELECLIKHIQDTVVVNILP
KLHRCIVAKVKRDEEHKLVKSNVVNDDEVVRVPLAFAMVRVMQCLPQEVMEANLPSILLK
VCSFLRNRFQEIRDVARNTLTKIMEVLGVQYLMYILKEMQSTLVHGYQLHVLTFTVNLLL
KGLTTRLSAGDLDPCLDILIEIFNQELFGDVAEEKEVKGIVSKVMEARKNKSYDSYEILG
KYIGKGQVTKLILPLKEILESTTSLKIVRKVHETLRHIMAGLIFNSDMNAEYLLLLSHGL
ISENLPLLTEKAKTKVVPPPDPRLQPESCLLLPPTPTRGGQKAPISRRTNMLILVDAGLR
LLHMSLKRSKINSSDEHVLEMLDPFVQLLINCLKSMDVKVITGALQSLVWILKFPLPSVN
TNLESLIKQLFLLLKEFAKTGVAKGQNFHLVVNCFKSVTILVKNAKSHITSKQLQVLLGF
AEEDIYDSSRQATAFGLLKAILSRKLIVPEIDDVMQKVAQLAITGQSEPVRVQCRQIYLK
YILDYPLGDKLKPNLDFMLAQLDYEYETGRESALEMIAYLLDMFPQELLHKYCGLFFLSL
CMTMINDDSAKCKKMAALTCKSLLTKINNNKQDLMFSLVTEWFHSKKSLHRRLAAQACGL
FVEVEGVMFERRLEAVLTLIEKEINPVQFEDITEEEEEKAADRLLFSFLVLVTKLISECS
LIQLTKHGDLVSNIWGHVQSHLWHPHSWVWLTATQIFGLLFASHKPEDLVNEWKERQAGK
KRKPSAELSASTLFLTAELDSKMKEFVFAFCHQLHSKFLDQSLGEQVVKNLLFVAKVIYL
LAPASEEGEEAEGELGCEVEQQEPSEDEGEQDVSAQGEGEEEDTEEKGQPATLVWLMKKL
SLMAKREAAYSPKVPLKRSCIFKFLGAISVDLGKDRIKPYLPTILTPLYRELNSTYAEQD
PTLKNLSQEIIELLKKLVGLEAFSLAFSSVQKQANQKRAMRKKQRALQTVANPDIAARRK
LKRHKTKAETRKRKIEFLRRGYKAKKPRSHALKDLAMVE
NT seq
8400 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcaagccctcggcccccaagtcggggaacacgcaccggtttctcaccttttcg
gagcgcttaagtaatgttaatattgatattattcatcggattgacagaactggaagttat
gctgaggaggttgaaacctacttttttgaaggactacagaaatggagggaactgaacctt
actcaacattttgtgcagttctacaaagaagtggccaacaaatgccagtccttcaaccag
ctggtctattaccagagtactgttgtgcagagcttgaagacacatttgcaagtcaaaggc
agtcttgcctatcaacccttattagatctagtggtgcaactggctcgagatctccaggct
gatttctatccacacttccatgacttcttcctggccatcaccaatctactggatacacag
gacacagagttgctggaatgggcttttacctctctttcctatctctacaaatacttgtgg
agattgatggtgaaggacataagtaacatatacagcctgtacagcaccctgctggctcac
cacaaacttcacatcagaaactttgcagctgaaagttttgtctttctaatgagaaaggtt
tctgataaaaatgccctcttcaatttgatgttccgtgacctggggaagcaccctgagaag
gtggaaggtgtaggacaactactttttgagatgtgcaagggcgttcgaaacatgttccac
tcttgtgcagagacggctgtgaagttaattctggtaaagctggggccagttactgaagag
gagattgaactaccatgggtaactgttggagaagcctttgagcagatgatcagatcagct
gcagtgcacatccataaggagcattttgatactgttttcaagtgtctggaggagtcactc
ttagacttgcaaagcaaaataactaaggccaactgcagtatggcgtcagagcagatggaa
aggattctgcaagcatatctgatcctattggaacacgcaaatggatccaaagtctcactg
cctgaagaggtctgtcaggttttaataaaaatgttacaaacatcagatctcttgccatct
tgctgcaagaccctgctgaatgcaatttctgcgttactactggccgagaatgttttcttg
cctgattctttgaccaaggaagctattgagaaggtattcgcaagtgaatttgaatggcgc
ttgcttttggacttctctgaaacgatgtttacaatgaagcagtttgagaggcattttctt
ccatgctttctaaaatacattgagcattgcttctctagtacagatgcccttgtaaaggat
gaggcaatggcaattttggctaaactcattctggtgaaagcagagcctcctaccattggt
tcaatggcatttgaaaagtatcctctcgttttcactgaatcatcaatcagctctaataca
agacaacaaacaagcaaaagacaaggaggaaaagcaaaagtaccagtgctggatcatgta
ctgtctttaatccagttaccagagaacgaagtcatcactgacctttcacagccttgggtt
gccttggttatactgccacatattagaccaatggacaaagaaatcatcctgccctctgtg
acaagctttataggttgtctgtttgcagctattgacaaaggaaccctctgcaaaggaagc
ctgttcgtggcctgccaagctgtaagtactcttctcagtttggcagagtcttctgaaata
ctccatttgttacctgtggagcgtgtcaagaacttggtgactgcttttccatcggacccc
tctgcgttgctgttggctgatctctattacacaagactggcattgtgtggctgccaggaa
cccctttcccaagggaacctaatggagttgtttgagaagttgcagcctaatatctccact
ggtatttctaaggtccgactattgactgtccgaattctaaaccattttgagaatccacct
tctacagtgattgagagtgatggcacaggagagctccagtcagtatttgccatattgctc
caagcagagcttgtgccagcaacagtgaatgattacagagagaaacttctccatttgagg
aaactaagatgtgatgtagtgcagtctacaataccaagtggatctttgcaggaggtgcct
cttcggtatttgctgggaatgctttatattaacttcagccctctctgggatcctgtaatt
gaactcataacttctcatgcaaaggaaatggagaataaacagttctggaaggtcttttat
gaacatttggagagggctgctgtgtatgctgaaatggagctgcaaaatgaactggatgaa
caggaggaaagcatcgctgaaacggaaagcgagaagatgccagaaggaggggtgggcact
gttttcctggagcggctgaggactagaacagactgcagtgagcggttggaccacacaaac
ttccgttttctactgtggaaagcactggacaagtttccagacagggtggagcctcggtca
agggaactctccccacttctgttgaggttcattagaaatgagtactacccagcagattca
ttagtggctccaactcaggatcttagaaagaagactagtggtgcagtagcagcaaaagag
ttatctaatgaagaagtaaatgatgttactatggaggaagaggaggaagaaaaggaagaa
ggagaaccaattactgtagggcttccaaaaaagaaaacaagaagagctgctgctaagcaa
ctaatagctcacttacaagttttctctaaattctcgaatcctcgtgcattgtatctggag
cagaagttaaatgcattatatacccagttactgtcccatcaagaccagaacgtgcagaga
atagctcttgactgtatcatgacatacaagcatcctcatctactgccatacagggagaac
ttgcaaagactactggaggacaagagctttaaagaagaaatagtccatttcagtatttct
gaggagaatgcagtagtaaaaatggagcatcgaccatatctcatccctgttcttatgaga
attctctatggcaggatgagaaacaaaacgggcagtaaaacgcagggcaagtcttcagca
ggcactcgcatgtcaatcgttctgcgatttcttgctggctccctgccagaagagatacgg
atgttcttggatctgctcttcgaagctgtgaagcaattcagtaatgggccttgccagact
gcagtgcttcgaagcatgtcagagctggatttagctaaagtcctgcctcttggacgtcag
catagcctcttcaatggtctcgaagttgtattgaaaaacatgggacatctgatcagtcag
tacctacctgaaattctacagattatgctgtgcatgacagcagtggtatcctgcatcctc
cagcaaagagagaaggtccaacctcggttgattaatccactgaagaatttgagacgtctt
ggactcaagcttgtggtggagtttttttctgattacgagacctacagctttagtgtggag
gagattgatgcagttttccatgcagtggtatggcctcaggtttgcaggttggcttcagag
agtcagtattctccgacttttctgctgaaactcattcacacctggagtaagaatcccaga
tatttcccgttgctggccaagcagcatccagaacgtccagagtgtgacatactgtcaaat
gtgtttgctgtgctgtcagccaagaatctgtctgaggcaacatccaatcttgtgatggac
atagctgatagccttctcaacagccccaattttgaacccacggagcaggtttccagtttg
aatgtgactgactgtgttgtcatggacactggagaagtgatggaagagaccattagccta
ggttgccgtttggttctgcctcatgttcctgccatacttcagtacttcagcaaaacaatg
ttaaatgtggagaaagtgaaaaagaagaagtacagagctcaagtcagcaaagagctgaat
atactttccaagatcagcaaatttatacaagagaagagtcagaattcagtgcttgtgagc
ctcctcctccctttccttcaccagagtaacatggaacaagatgcagagattgacattctg
gaaacagtgcagaacttgctgagacattgctcaaaccctgcaagctttctcaaacctctg
gcaaagcttttttctgtcatccagaacaaactgtctcgacagaagttgtgcttggtattt
cagactttatctgatttggacagtggattgaaatacattactgatgttgttaagctaaat
gcctttgatcaacggcatcttgatgatatcaactttgatgtacgtctgtcagcattccag
tcaatcacagcccacatcaaagaaatgcaagcagtggatatcaacttcctgatccccgtt
atgcacaactgcttctatactatccagctaggggatatggctcttagtgacaacgcaagc
ctttgcttgaccagttttatccaccgcctggcagaaatcgaccatacggaagatgactac
aaggagctgatccagcacactctcctggagtctgtgagaagggggctgaagagtaagact
gagaacatccagcaggactacacatcgttgctttcctgcctcattcaaacattcccagca
aatcctgaattccgggacttggtccagctaaccaactgccatgatcctgacatggacttc
tttgaaaatatgaaacatatgcagatccacaggagggcacgagccctgaggaaactggct
aagcagctgactgaaaaaaaacttgtgctgtcttccaaatccctgcagaactacatcatg
ccttatgctactactgccatttttagtgaaaaaatgcttaagcatgaaaatatggtaaca
gcctctgttgaagttgttggagctgtctgccgacatctgtcgtggtcagcgtacttgtac
cacttaaagcatttcatccatgtcctgcaaacggggcagatcaatccgaagttgggagtc
agcttgttagagacagttctggaagcctttcactttgaccatgaaacgcttgaaaaacag
cttgtgaccattgagaaccatgaagctgctgacatggatatcgagccagtggtggagggt
gaagaagccatggagctggaacagagtgaaggggaagaggagagggttgaggaaaacaaa
ggggagaatatccctgaggagccaacagaacctgcgctggtccaacctgaacaggcagct
gagacagctgaagacactgaacaagtggccagacctgtttctttcttaccccgaaataaa
gaagagctggagtgtttgatcaaacatattcaagatacagttgtagtcaacatcttgcct
aaattgcacaggtgtattgttgcaaaggttaaaagagatgaggaacacaagcttgtgaaa
tccaacgttgtgaatgacgatgaggtagttcgtgttcctttagcttttgcaatggtcagg
gtgatgcagtgtcttccccaagaagtgatggaagccaacctgccaagcatcctgctgaag
gtctgctcatttctgaggaacagatttcaggagatccgggatgttgcccgtaacaccctc
actaaaatcatggaagtgttaggagtgcagtaccttatgtacattttaaaagagatgcag
tctactcttgtccatgggtaccagctccatgtgctgactttcactgtgaacctgttactg
aagggccttactaccaggctgagtgctggcgatttggacccctgcctagatatcctgatt
gagattttcaaccaggagctgtttggggatgtagctgaagagaaggaagtgaagggaatt
gtctccaaggtcatggaagcacgcaagaacaagagttacgattcctatgaaattcttgga
aagtacataggaaagggccaggtgacaaaattgattctgccactgaaagagattctggag
agcactacaagcttgaagatagtccggaaggtgcatgagacactgcgtcacatcatggca
gggctgatcttcaactcagacatgaatgcagaatatctcctcctcctcagtcacggtctc
atcagtgaaaacttgcctctactcactgaaaaggcaaaaacaaaagttgtccctcctcca
gatcctcggctgcaaccagaaagctgcctgctgctcccacccactcctacgagaggaggg
cagaaagcacccatcagcagaaggacaaacatgcttatcttggttgatgcaggacttagg
ctgctacacatgagtctgaagaggtccaaaataaattcttcggacgagcatgttttggaa
atgttagacccctttgttcagctgctcataaactgcctgaaatccatggatgtcaaggtg
ataactggtgctctgcagtccttagtatggattttaaagttccctttgccttctgtcaat
acgaatctggaatcactaatcaagcagcttttcctcttgctgaaagaatttgccaagaca
ggagtagccaaaggccaaaatttccacttggttgtgaactgtttcaaatctgtaacaata
cttgtgaagaatgcaaagagccatataacaagcaaacagctccaagtgttgctgggcttt
gctgaagaggacatctatgattcatcacgccaagccacagcctttggccttctcaaggct
attctatccaggaagctgattgtccctgaaattgatgatgtgatgcagaaggttgcccag
ctggccatcacgggccagagtgagccagtgcgagtccagtgcaggcagatttacttgaaa
tatattctggactacccccttggtgacaagctgaaacccaatttggatttcatgctcgcg
cagctggattatgagtatgaaactggaagggagtctgcgctggagatgattgcgtacctc
cttgacatgttcccacaggagctcctccacaaatactgcgggctgttttttctctccctc
tgcatgacgatgataaacgatgactcggccaaatgcaaaaagatggcagctctgacgtgt
aaatctctgctcactaagataaacaacaataaacaagacctgatgttttcgctggtcaca
gagtggtttcacagcaagaagagcttgcacaggaggttggctgcccaggcatgtggtttg
tttgtggaagtggagggagtcatgtttgaacgacgccttgaagctgtcctcaccttgatt
gaaaaagaaatcaacccagttcaatttgaagatataactgaagaggaggaggagaaggct
gcagataggctgctgttcagctttcttgtgctggtaacaaagctaatctcagagtgcagc
ttgattcagttaaccaagcatggagatcttgtcagcaatatctggggccacgtccagtct
cacctgtggcatcctcacagctgggtctggctgacagctactcagatctttggcttgttg
tttgcatctcacaagccagaagatcttgtcaacgagtggaaggaaaggcaagcagggaag
aagagaaagccatcagcagagctgtctgcgtccacgctcttcttgactgctgaactggac
agtaagatgaaggaattcgtgtttgcgttctgccatcagctgcactctaagttcttggac
cagtctctgggggagcaggttgtaaagaatttgctgtttgtcgccaaagttatttacttg
cttgcacctgcttcagaggaaggtgaagaggctgaaggagaactcggctgtgaagtggaa
cagcaggagccctctgaagatgagggagaacaagatgtttctgctcaaggagagggcgaa
gaagaggacacggaagagaaaggccagccagccacattggtatggctaatgaagaagctc
tctctcatggcgaaacgagaagcagcatattcccctaaagtccctttaaagaggagctgc
atctttaagttcctgggagcgatctcagtggatctgggaaaagacagaatcaagccgtac
cttccaacaattctcaccccgctgtacagggagctgaacagcacctatgcagagcaagat
ccgacactgaagaacctttcccaagaaattatagaactgctcaagaaattagttggactg
gaggctttttcacttgccttttcttcagtgcagaagcaggccaatcagaaaagagcgatg
aggaaaaagcaaagggctttgcagactgtagcaaaccctgacattgctgcaaggaggaag
ctgaagagacacaagaccaaagcagaaaccaggaagagaaaaatagagttcctgcgccgt
ggctacaaggccaagaaacctcgaagccatgcactgaaagacttagcaatggtggaatga
DBGET
integrated database retrieval system
