Cygnus atratus (black swan): 118250725
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Entry
118250725 CDS
T09349
Symbol
AQR
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118250725 (AQR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cata03041
]
118250725 (AQR)
Spliceosome [BR:
cata03041
]
Complex B
Other components
Prp19-related factors
118250725 (AQR)
Complex C
118250725 (AQR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
SLFN-g3_helicase
DEAD
UvrD_C_2
AAA
AAA_16
Parvo_NS1
AAA_22
PhoH
DnaB_C
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-GeneID:
118250725
NCBI-ProteinID:
XP_035407920
LinkDB
All DBs
Position
5
Genome browser
AA seq
1463 aa
AA seq
DB search
MAAPAASAPPKKIVAPTVSQINAEFVTQLANKYWAPHVKKKLCFDSKVIEDVYTKEIVKS
KFAIRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPE
HFPFFFKCILEASLVENDSEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMA
LQPKRLEQELKKTPKLRKFWNLIKKNDEKMNEEARMQAFRERRFLSQLIQKFISVLKSIP
VTGPICMDKVHYCERFIELMIDLEALLPTRRWFNTVLDDSHLVVHCYLSSLAKREKEGHL
FCQLLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRTAFAHFPELYDFALSNVA
AVDTRDSLVKLFGPLSSNTLHQVASYLCLLPPLPEGNDTSYEKDFLLELLVSRHERRISQ
IQQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLES
TYEIRQDIEDSVSRMKPWLSEYGGVVFGGWARMAQPIVSFTVVEVAKPNIGENWPMRVRA
DVTINLNVRDSIKDEWEGLRKHDVCFLVTVRPTQPYGTKFDRRRPFVEQTGLVYVRGCEI
QGMLDEKGRVIEEGPEPKPRLKGDCRTYRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIM
RRKPKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIASLDFNDT
FLSIDHLKASFPGYNIKVTVDNPDLQVPPFRITFPIQGGKGKKRKEDDGNEEKPEETKTL
IVEPHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQII
SNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGR
VNYVLARRLELLREVGRLQESLGVPGDVSYTCETAGHFFLYQVMSRWEEYISKVKVKGGK
LPNVTDVSSFFPFHQYFANAPQPIFKGKSYEEDMEIAEGCFRHIKKIFTQLEEFRAFELL
RSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIETFIPLL
LQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQG
RARASLCNLYNWRYKNLGNLPHVQLMPEFRTANAGFLYDFQLINVEDFNGVGESEPNPYF
YQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDVINQRCGNNPLIGRPNKV
TTVDRFQGQQNDYILLSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELT
PAFSQLTARPLHLHIIPTECFPAARQNGERPSHQIHVIKNMPQMANFVYNMYMHMIQSTR
HYQQRLLPPPAMIEEAEVTLTQETEAEVEVQGMQEDTKEENKVEEIKEEELKVAEVAEHR
TMPEHPGRDSDSEDSEPEDETEK
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggcggcctccgcgccgcccaagaagatcgtggcgcccaccgtgtcgcag
atcaacgccgagttcgtcacccagttagcaaataaatactgggctccgcatgtgaagaaa
aaattgtgctttgattcaaaggtcattgaagatgtatatacaaaagaaattgtcaagtca
aagtttgctattagaaagataatgcttcttgaattcagccagtatcttgaaaattaccta
tggatgaattattctccagaggtgtccagtaaggcatatttaatgtcaatctgctgtatg
gtgaatgagaagttcagagagaatgtccctgcgtgggagacattcaaaaaaaaaccagaa
cactttcctttcttcttcaaatgcatattggaagcatcactggttgagaatgacagtgaa
ttctctctacacgaacagacagtcctcctgcttttccttgatcattgcttcaatagtttg
gaagtggatttgatcagaagtcaggtgcaacagctcatttccttaccaatgtggatggct
ctacaacctaaacgactggaacaagagctgaaaaagacaccaaaactaagaaaattctgg
aatctcattaagaaaaatgatgagaaaatgaatgaagaggcaagaatgcaagcatttcgg
gagagaagatttctttcacagctcattcagaaatttatttctgtgctgaaatcgatacct
gtcacaggtcctatttgtatggacaaagttcattattgtgagagattcattgaactcatg
atagatcttgaggctttgcttcctacacgacgctggtttaacacagtgttggatgactcc
catcttgttgttcactgttacctatctagtcttgccaagagagagaaggaaggtcatctc
ttctgccagcttttagatatgcttaaattctacactggctttgaaatcaatgatcagact
ggaaatgctttgaccgagaatgagatgacgacaattcactatgatagaattacttcttta
cagagaacagcgtttgcacatttcccagagttatatgacttcgcactctcaaatgtagct
gcagtagatactcgtgattcactggtgaagttattcggacccctcagctcaaacacactc
caccaggtggcatcatacctctgcttactgcctcctcttcctgaagggaatgatactagc
tatgaaaaggattttctgctagagctgctggtttcccgtcatgagagacgaatatctcaa
attcagcaactcaaccagatgcctctgtatcccacagagaagattatttgggatgaaaat
attgtcccaactgaatattattccggagaaggctgtcttgcacttcccaaactgaatcta
cagtttttgactcttcatgattacctgctaaggaacttcaatctcttccgcttagagtcc
acctacgagatcagacaggatattgaagacagtgtcagtaggatgaaaccatggctatca
gaatatggaggcgtggtttttggtggatgggctaggatggcacaacccattgtctctttc
acagtggtggaggttgcaaagcctaatattggtgaaaattggcctatgcgagtccgagca
gatgtcacaattaatttgaatgtccgagatagcatcaaagatgaatgggaaggtctacgt
aaacatgatgtctgttttttggttacggtacgtcccacacaaccttatggcactaagttt
gaccgacggcgaccttttgttgagcaaactggtctggtgtatgtcagaggctgtgaaatc
caaggcatgctggatgagaaaggccgtgttattgaagaaggacctgaacccaaacctaga
cttaaaggggattgcagaacatacagagtatttctggacccaaaccagtatcaacaagac
atgaccaatacaatacaaaatggagcagaagatgtctatgagacatttaatattataatg
agaagaaaaccaaaagaaaacaacttcaaggctgttctggagactattaggaatttgatg
aacacagattgtgtggttcctgactggctgcatgacatcattcttggatatggagaccca
agtagtgcacattattcaaaaatgccaaatcagattgcatctctggattttaatgacact
ttcctgtccattgatcacttaaaagctagctttcctgggtataatattaaagtgactgtt
gacaatccagatctgcaagtaccccccttcaggataacattcccaatacaggggggtaaa
ggaaagaaacgaaaagaagatgatgggaatgaagaaaaacctgaagaaactaaaacgttg
attgtagagcctcatgtcattccaaacaggggaccatatccatataaccaaccgaaacgc
aatactattcaatttacccacactcaaattgaagctatacgagcaggaatgcagcctggg
ctaactatggtagtgggtccacctggtacagggaaaactgacgtagcagtccagataata
tccaatctttatcataatttcccagaacaacgaactcttatagttacccactctaatcag
gccttgaaccagctgtttgaaaaaatcatggctctagacattgatgaacgccacctcctg
cgtctgggtcacggagaagaggaattagagacagagaaagatttcagcaggtatggaaga
gttaattatgttctggctcgaagacttgaacttctgcgagaagttgggcgattgcaagag
agtcttggagtcccaggagatgtttcttatacttgtgaaacagctggccactttttctta
taccaagtaatgtctcgttgggaggaatatatcagcaaagtgaaagttaaaggtggaaaa
ttgccaaatgttacggatgtgtccagtttctttccttttcaccagtattttgcaaatgct
cctcaaccaattttcaaaggcaaatcctatgaagaagatatggagattgctgaaggctgt
tttagacatattaagaaaatattcactcagcttgaggaattcagagcatttgaacttctc
cgcagtggcctggatagatccaaatatctgttggtgaaagaagcaaaaatcattgctatg
acttgtacccacgctgctctgaaacgacacgacctagttgaattaggtttcaaatatgac
aacatcttaatggaggagtctgcacagattctggagatagagacctttatacctctcctg
ttgcagaaccctcaggatggattcagtcgtttgaagcggtggattatgattggcgaccat
caccagttgccaccagtcattaagaacatggcttttcaaaaatactccaacatggagcag
tccctcttcacacggtttgttcgtgtcggagtaccgactgttgatttggatgcacaagga
agagcaagagcaagtttatgtaacctctacaactggcgctataagaatctgggtaatctg
cctcatgtccagcttatgccggagttcagaacagccaacgctgggtttttgtatgacttc
cagcttataaacgtagaagacttcaatggtgtgggagagtctgaacccaatccttatttc
tatcagaatctcggcgaagcagagtatgttgtggcactattcatgtatatgtgcctgctt
ggttaccctgcagacaagataagcatcctgacaacatacaatggacagaagcacctgatc
cgtgatgtcattaaccagcggtgtggaaataatccactgatcggacggccaaacaaggta
acaactgtggacagatttcaaggtcaacaaaatgattatatcctcctgtcactagtgcgt
accaaagctgtaggccaccttagggatgtccgacgattagtcgttgccatgtcaagagcc
aggcttgggctttatatctttgcaagagtatcgctgtttcagaactgttttgaactaact
ccagcattcagccagctcacagctagaccacttcacctccatataattcccacagaatgt
tttccggcagcaagacagaatggagaacgaccatctcaccaaatacatgttattaagaac
atgcctcagatggctaactttgtgtacaatatgtatatgcacatgatacagagtacacgc
cactaccaacagcgtttattgcccccacctgccatgattgaagaagctgaagtgactcta
actcaagagactgaagcagaagttgaagtgcaaggcatgcaggaagatacaaaagaagaa
aataaggtagaagaaataaaggaagaagaattgaaagtggcagaagtggctgaacatcga
acaatgccagaacaccccggaagagacagtgatagtgaagacagtgaacctgaagatgag
actgaaaagtga
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