Cygnus atratus (black swan): 118250758
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Entry
118250758 CDS
T09349
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118250758 (NPAS3)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118250758 (NPAS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
118250758
NCBI-ProteinID:
XP_035408008
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All DBs
Position
5:complement(20178532..20803315)
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AA seq
925 aa
AA seq
DB search
MAPTKPSFQQDPSRRERITVQHPLPNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAA
RSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEG
PPPNTSVKGIQMWKSEVCMRKTPCEVIGAQRRRSPSALAIEVFESHLGSHILQSLDGFVF
ALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQ
GTAEDGASSASSSSQSETPEPVESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGY
KVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNI
IYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNG
GYIWIQSSATIAVNAKNASEKNIIWVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSD
SESDSKDNSEDNENSKSDEKGNQSENSEDPESDRKKSGNQSDNEMNCNDDGNSSSNQDSR
DSDDSFENSDFENQKAPEDSFGTLGSMQIKVERYVESESDLRLQNCESLTSDSAKDSDSA
GEVNAQSSSKHQKRKKRRKKQKGGSMTRRRLSSTSSPNGLDSALVDQPQLLSSPNSASVL
KIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPSSEHFPSPQASSSLHVSIPD
SVLTPPGTENTASRKTQFSTSSNSALAPVSSDPLSPPLSASPRDKHPGGPTTSNSLLYTG
DLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLPNT
HAVNFVDVNSPSFGLDPKTPMEMLYHHVHRLNMSGPFGSAVSGASLTQMPAGNVFTTAEG
LFSTLPFPVYSNGIHTTQTLERKED
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccaagccaagctttcagcaggatccttccaggcgagaacgaataactgtc
cagcatcctctgcccaaccaatcagaatgtaggaaaatctacagatatgacggaatctac
tgtgaatctacctaccagaatttacaagctttgaggaaggaaaagtcccgagatgctgct
cgatctcgccggggaaaggagaattttgaattctatgagttggcaaagttgttgccgctg
cctgcagccattaccagccagcttgacaaggcatccatcatccgacttacaattagctat
ctgaaaatgagggactttgctaatcaaggcgatcctccatggaacttgagaatggaagga
cctccacctaatacatcagtaaaagggatacaaatgtggaaatctgaggtctgcatgaga
aagacaccatgtgaagttataggtgcccagcgcaggagaagtcccagtgcccttgccatt
gaagtatttgagtcacatttgggaagtcatattttacagtccctggatggatttgtattt
gcactaaatcaagaaggaaaatttttgtacatttcagaaactgtctccatctatttaggc
ctgtcccaagtggaactgacaggcagcagtgtgtttgactacgtccacccaggagaccat
gtggagatggcagagcagctgggcatgaagcttcccccagggcgaggccttctctcgcag
ggtacagccgaggatggagccagctcagcatcctcgtcttcccagtccgagacccctgag
ccagtggaatctacaagccccagtttactaaccactgacaacactctagagcgctctttt
ttcatccgaatgaaatctacactgaccaagcgaggagtgcacatcaaatcgtcaggatac
aaggtgattcatataacaggccggttacgtctgagagtgtcactgtctcatggacggaca
gtacccagccaaatcatgggacttgttgtcgttgctcatgctttgccacctcctacaatt
aatgaagtcaggattgactgccacatgtttgtcactcgtgtgaatatggacctcaatatc
atttactgtgaaaataggattagtgattacatggatctgacccctgtagatattgtagga
aagagatgctatcacttcattcatgctgaagatgtggaaggcatcaggcatagtcactta
gacttgctgaataagggtcagtgtgtaacaaagtattaccgctggatgcagaagaatgga
ggttatatctggatacagtctagtgcaactatagctgtcaatgccaagaacgcaagtgag
aagaatatcatctgggtcaattaccttctcagtaacccagagtacaaggacactcctatg
gatattgcacaacttcctcatctgccagagaaaacctcagaatcctcagagacctctgac
tctgaatcggactcaaaggacaactcagaggacaatgagaactcaaagtcagatgagaaa
ggaaaccagtcagaaaacagtgaagaccctgaatccgacaggaaaaagtcaggaaatcag
tcggataatgaaatgaactgtaacgatgatgggaacagctccagcaaccaggacagcagg
gacagtgatgacagctttgaaaactcagactttgagaatcaaaaggcccctgaggacagt
tttggcactctaggctctatgcagatcaaggtggagcgttatgttgagagtgagtcagac
ctgcggttgcagaactgtgaatcactgacctcggacagtgccaaggactcagacagtgca
ggggaagtaaatgcccagtcttccagcaaacatcaaaagaggaagaagaggagaaaaaag
caaaagggaggcagcatgacccggagaaggctgtcaagcacctcaagcccaaatggactt
gactcagctttggtggaccagccccagctgctctcgtcaccaaacagtgcctcagtgctc
aaaattaaaacagaaatctcagaacctatcaattttgataatgatagcagtatttggaat
tacccacccaacagggaaatctcaaggaatgaatcaccctacagtatgaccaagcccccc
agctccgagcacttcccttcccctcaagccagcagtagtttacatgtctccattccagac
tctgttctcaccccaccagggactgaaaatactgccagccgtaaaactcagttcagcacc
tcatccaactcagccttggctcctgtgtcctctgaccctttgtcacccccgctttcagca
tctccacgggacaaacatccaggaggtcccacaacttccaactctttgttgtacactggg
gatctggaagcccttcagaggttacaagcaggcaatgtggtgcttcctttggttcacagg
gtaacaggaacccttgccgcgaccagcactgctgctcagagggtctacaccactggcact
attcggtatgctccagctgaagttactttagccatgcagggcaacctcctccccaacacc
catgctgttaactttgttgacgttaacagccccagctttgggctggatcctaaaacaccg
atggaaatgctctaccaccacgttcaccgactcaatatgtcaggaccgtttggaagtgct
gtgagcggggccagtctgacccaaatgcctgcagggaatgtgttcacgactgccgaagga
cttttttccactcttccatttcctgtgtacagcaatggcattcacactacacagactctg
gaacggaaagaggattga
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