Cygnus atratus (black swan): 118250812
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Entry
118250812 CDS
T09349
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
118250812 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118250812 (CNGA1)
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
118250812 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
Ion_trans_2
Connexin
Tim54
Menin
GmrSD_N
Ribosomal_S2
BSMAP
NatA_aux_su
MDM10
ADI
RNA_pol_Rpc4
SlyX
SLC52_ribofla_tr
NPR3
Sec62
CPSF100_C
Zip
Motif
Other DBs
NCBI-GeneID:
118250812
NCBI-ProteinID:
XP_035408137
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All DBs
Position
4:50590464..50595119
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AA seq
647 aa
AA seq
DB search
MKVGVIETHHSHTVIPSVVVQDTSEDPGLMDKGENRYVGFRHLPGAFAHYNINNNSNKDE
EKKKKKEKKSKSENKKDGETQKNKEKKEKNKNKDKSKKKEKNEEKKKDIFVIDPAGNMYY
NWLFCITMPVMYNWTMIIARACFDELQNDYLVVWFIVDYISDIIYIADMFVRTRTGYLEQ
GLLVKEEQKLREKYKSSLQFKLDFLSIIPTDLLYFKVGLNYPELRINRLLRVARMFEFFQ
RTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSHPEFARLV
RKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMISNMNAA
RAEFQAKIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEIA
INVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLAV
VADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMEALT
EYPDAKAMLEEKGKQILMKDGLLDIELANLGSDPKDLEEKVAYMEGSMDRLQTKFARLLA
EYDAAQQKLKKRLTQIEKILKPVIEQEFADLEELDPSADKPAASKAE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtgattgagacccatcactcccatacagttattcccagtgtggtagtg
caagacaccagtgaggaccctggactgatggacaaaggggaaaacaggtatgttggattt
cgacatctacctggtgcatttgcacactacaacatcaacaacaatagtaataaggatgaa
gagaagaaaaagaaaaaagaaaagaagagcaagtcagaaaataaaaaggatggcgaaaca
cagaagaacaaggaaaagaaggaaaaaaacaaaaataaagataagtccaagaagaaggaa
aagaatgaagagaagaagaaagatattttcgttattgatccagcaggaaatatgtattac
aactggttgttttgcatcacaatgcccgtcatgtacaactggacgatgattattgctaga
gcctgttttgatgagcttcagaatgactacttagtggtatggtttattgttgattacatt
tctgacatcatctatattgctgacatgtttgtacggacaagaacaggttacctggagcaa
ggtcttctggtgaaagaagaacaaaagcttagagagaaatataagagttccttacaattc
aaattagattttctgtcaatcataccaactgacctcttatactttaaggtaggactgaat
tacccagaactaagaataaatcgactactcagagtagctcggatgtttgaattcttccag
agaacagaaacaaggacaaactacccaaatatcttcaggatctctaaccttgtcatgtac
atcgtgattattattcactggaatgcctgtgtgtactactcgatctcaaaggctattgga
tttggggctgacacgtgggtctaccccaacacttcccatcctgaatttgcccgtctggtt
agaaagtacgtctatagtctctactggtcaacactgaccctgactactattggtgaaacg
ccccctcctgtaagggattctgagtatttcttcgtggttgttgacttcttggttggagta
ttgatttttgctaccattgttggtaacgtcggttctatgatctccaacatgaatgctgcc
agggcagagtttcaagcaaagattgatgctatcaagcagtatatgcactttcggaacgta
agtaaagacatggaaaaaagggttataaagtggtttgactatctgtggacaaacaaaaag
gctgtggatgaaagggaagtcttgaagtacctgccagacaaactaagagcagagattgca
atcaacgttcaccttgaaacactaaaaaaggttcggatttttgcagactgtgaagctggt
ctgctggttgaactagttttgaaactccagccacaagtatacagtcctggggattatatt
tgcagaaaaggagatatcggacgagaaatgtacattatcaaagaaggcaaacttgcagta
gtcgctgatgatggaattacacaatttgtggtcctaagtgatggcagctattttggagaa
atcagcattcttaatatcaaaggtagcaaagctggcaatcgaagaacagccaatattaga
agtattggatactcagatttgttctgtttgtctaaagatgatctcatggaggctttaaca
gagtatccagatgcaaaggcaatgctagaagaaaaaggcaagcaaatcctaatgaaagat
gggttgctggacattgaacttgcaaatttaggaagcgatcctaaagatctggaagagaag
gttgcttacatggaaggatcaatggacagattacaaacaaagtttgccagattgttggct
gagtatgatgctgcacaacagaaactgaagaaaagacttacacaaattgagaaaatattg
aagccagttatagagcaagaatttgcagacttggaagaactagatccatctgcagataaa
cctgcagcgtcaaaagcagaataa
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