Cygnus atratus (black swan): 118250835
Help
Entry
118250835 CDS
T09349
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04620
Toll-like receptor signaling pathway
cata04621
NOD-like receptor signaling pathway
cata04622
RIG-I-like receptor signaling pathway
cata04623
Cytosolic DNA-sensing pathway
cata05164
Influenza A
cata05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118250835 (IRF7)
04621 NOD-like receptor signaling pathway
118250835 (IRF7)
04622 RIG-I-like receptor signaling pathway
118250835 (IRF7)
04623 Cytosolic DNA-sensing pathway
118250835 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118250835 (IRF7)
05168 Herpes simplex virus 1 infection
118250835 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118250835 (IRF7)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
118250835 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Hormone_6
Motif
Other DBs
NCBI-GeneID:
118250835
NCBI-ProteinID:
XP_035408203
LinkDB
All DBs
Position
5:19657897..19661686
Genome browser
AA seq
507 aa
AA seq
DB search
MAAAESEGDAQKLRFGPWLVNAINSGLYQGLCWTDPARRVFRIPWKHNARKDVTSSDIEI
FKAWAQASGRYEGSPEDPAKWKTNFRCALRSTHMFTLLEDHSKNSDDPHKVFAVNSTAPQ
HGQDGGFGGPVADAPPQQQPQLELNHHDVAPQIAPRGSATATTTQSLTLEDLDMLQLVLQ
HCNISTLGPTPSPWPPAGDVLHDEDALLQPGPSQGGCLPPTVFQEWGPVAEQPPLGAYSP
SDHMLLGEQTIPGAVPLPCHTLPAEQEPAGPVLSPGEALLFHPAASPPPPADDTGIPPHL
DITIYYRGKTVHQEVVNDRRCLLAYQSLDPAVALQPGQRVLFPSPEGLADSKQRQFTEEL
LLGVGLRLEQRAGRLFATRLKKCKVFWALSQQLDNGKPPPNLLCRDQETPIFDFNVFCTE
LRDFRDNRRERSPDFTIFLCFGQCFSNCKPKESKLILVKLVPKFCEHWYEQVQREGASSL
NSGNVSLQLSDSFSLYELIEQYSMQMD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcggagagcgaaggggatgcccagaagctgcgctttgggccgtggctggtg
aacgccatcaacagcggcttgtaccaggggctctgctggactgacccggcccgcagggtc
ttccgcatcccctggaagcacaacgccaggaaggacgtcaccagcagcgacatcgagatc
ttcaaggcctgggcgcaggccagcgggaggtacgaggggagccccgaggacccggccaag
tggaagaccaatttccgctgcgccctgaggagcacccacatgttcacgctgctggaggac
cactccaagaacagtgacgaccctcacaaggtcttcgccgtcaactcaactgccccccag
catggccaggacggaggttttgggggccctgtggcagacgccccgccgcagcagcagcca
cagctggagctcaaccaccacgatgtggccccgcaaatcgcaccccgaggcagtgccact
gctaccacgacgcagtcgctgacgctggaggacctggacatgctgcagttggtgctgcag
cactgcaacatctccaccctcggccccacaccgtccccctggccgcccgcaggggatgtc
ctgcacgacgaggatgctctgctccagcccggccccagccaaggcggctgcctcccccca
acggtgtttcaggagtgggggcccgtggcggagcagcccccgctgggcgcctacagcccc
tcggaccacatgctgctaggggagcaaaccatcccaggagctgtgccgctgccgtgccac
acgctccccgctgagcaggagcccgccggccccgtgctgtccccgggcgaggcgctgctc
ttccaccccgccgccagccccccgccgccggcggatgacacagggatccccccccacctg
gacatcaccatctactaccgggggaagacggtccaccaggaggtggtgaatgacagacgg
tgcctgctggcctaccagtccctggacccggcggtggccctgcagccagggcagcgcgtc
ctcttccccagccccgagggcctggctgacagcaagcagcggcagttcaccgaggagctg
ctgctgggcgtggggctgcggctggagcagcgcgccggcaggctcttcgccacccgcctg
aagaagtgcaaggtcttctgggccctgtcgcagcagctcgacaacgggaaacccccgccc
aaccttctgtgccgggaccaggagacccccatctttgacttcaacgtgttttgcacagag
ctcagggacttccgcgacaaccgcagggagcggtcccctgacttcaccatcttcctctgc
ttcgggcagtgcttctccaactgcaagcccaaggagtccaagctcatcctggtgaagctg
gtgcccaagttctgtgagcactggtacgagcaggtgcagcgggagggagcctcctccctc
aacagcggcaacgtcagcctgcagctctccgactccttcagcctctacgagctcatcgag
cagtacagcatgcagatggactga
DBGET
integrated database retrieval system