Cygnus atratus (black swan): 118250848
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Entry
118250848 CDS
T09349
Symbol
CAPRIN1
Name
(RefSeq) caprin-1 isoform X1
KO
K18743
caprin-1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118250848 (CAPRIN1)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118250848 (CAPRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
DUF1140
Motif
Other DBs
NCBI-GeneID:
118250848
NCBI-ProteinID:
XP_035408223
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Position
5:complement(16953011..17033047)
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AA seq
702 aa
AA seq
DB search
MPSATNSTTASSSSGKAGPATEPAPAAAAAAPQASGGSITSVQTEAMKQILGVIDKKLRN
LEKKKSKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTI
KKTARREQLMREEAEQKRLKTVLELQFILDKLGDDEVRNDLKQGSNGVPVLTEEELTMLD
EFYKLVYPERDMSVRLNEQYEQASVHLWDLLEGKEKPVCGTTYKALKEIVERILQTSYFD
STHNHQNGLCEEEEAAPTPAVEDTVAEAEPDPAEEFTEPTEVESTEYVNRQFMAETQFSS
SEKEQVDEWTVETVEVVNSLQQQTQATSPPVPEPHTLTTVAQADPLVRRQRVQDLMAQMQ
GPYNFMQDSMLEFENQTLDPAIVSAQPMNPAQNLDMPQMVCPPVHTESRLAQPNQVPVQP
EATQVPLVSSTSEGYTASQPMYQPSHTTEQRPQKESIDQIQASMSLNADQTPSSSSLPTA
SQPQVFQAGSSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQ
SFSNQPHQVEQSDLQQEQLQTVVGTYHGSPDQTHQVAGNHQQPPQQNTGFPRNSQPYYNS
RGVSRGGSRGTRGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQPQFNAPRDYSNYQR
DGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNAQQVN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggctaccaacagcaccacggcgagcagcagcagcggcaaggccggcccggcc
accgagcccgccccggcggcggcggcagcggcccctcaggcgtcgggcggcagcatcacc
tcggtgcagaccgaggccatgaagcagatcctgggagtgatcgacaagaagctgcgcaac
ctggagaagaaaaagagtaaacttgatgattatcaggaacgaatgaacaagggagaacgt
ctaaatcaagatcaactggatgcagtgtcaaaataccaggaagtgacaaataatctggaa
tttgctaaagaactgcagaggagttttatggctctgagccaagacatccagaaaacaata
aaaaagacagctcgtagggagcaactgatgcgagaagaagctgagcagaagcgtttaaag
actgtactagagctgcagtttattttggacaaattgggtgacgatgaagtgcgcaatgac
ttgaagcaaggatcaaatggagtaccggtgctgacagaggaggaactgacaatgttggat
gaattttacaagttagtttaccctgaacgagacatgagcgtgaggttgaatgagcagtat
gagcaagcatctgttcacctgtgggacttactggaagggaaggaaaaacctgtttgtgga
acaacctataaagccctaaaggagattgttgaacgtattcttcaaactagttactttgat
agcacccataaccatcagaatgggttatgtgaggaagaagaggcagcacccacacctgca
gtagaagacactgtagcagaagctgaacctgatccagcagaggaattcactgaaccaact
gaagttgaatcgactgagtatgtaaacagacaattcatggcagagactcagttcagcagt
agtgagaaggaacaggtagatgagtggacagttgaaacggttgaggttgtaaattcactg
cagcaacagacacaagctacatctcctccagttcctgaacctcacacgctcactactgtt
gctcaagcagatcctcttgttagaaggcagagagtacaggacctcatggcgcagatgcag
ggcccatataacttcatgcaggactctatgctggagtttgagaaccaaacacttgaccct
gccattgtatctgcacagcccatgaatccagcacagaacttggacatgccacaaatggtt
tgccctccagttcatactgaatcaagacttgcccagcctaaccaagtccctgtgcaacca
gaagctacgcaggttcccttggtttcttctacaagtgagggatatacagcttcccaaccc
atgtatcagccttctcatacaacagagcaacggccacagaaagaatcaattgaccagatt
caggcttcaatgtcactgaacgcagaccagaccccgtcgtcatcatcacttcccactgca
tcccagccccaggttttccaggctggatctagcaaacctttgcatagcagcggaataaat
gttaacgcagctccattccaatccatgcaaacagtattcaacatgaatgcacctgttcct
cctgttaatgagccagaaacccttaagcaacaaaatcagtaccaggcaagttacaaccag
agtttctccaatcagccacaccaagtagaacaatcagatcttcagcaagaacaactccag
acagtggtcggcacttaccatggctccccggaccagacccatcaagtggcaggtaaccac
cagcaacctccccagcagaatactggatttccacggaacagccagccttattataacagt
cggggagtgtctcgtggtggatcacgtgggactcgcggtttgatgaatggttacagggga
ccggcaaatggatttagaggaggatacgatggctaccgtccttcattttccaacactcca
aacagcggttacacgcagccccagttcaatgctcctcgagattattcaaactaccagcgg
gatggatatcaacagaatttcaaacgtggctctggacaaagtggacctcggggagctcct
cgaggtcgtggagggcccccaagaccaaacagagggatgcctcaaatgaatgctcagcaa
gtgaattaa
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