Cygnus atratus (black swan): 118250877
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Entry
118250877 CDS
T09349
Symbol
CDK13
Name
(RefSeq) cyclin-dependent kinase 13 isoform X1
KO
K08819
cyclin-dependent kinase 12/13 [EC:
2.7.11.22
2.7.11.23
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cata01001
]
118250877 (CDK13)
Enzymes [BR:
cata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
118250877 (CDK13)
2.7.11.23 [RNA-polymerase]-subunit kinase
118250877 (CDK13)
Protein kinases [BR:
cata01001
]
Serine/threonine kinases: CMGC group
CDK family
118250877 (CDK13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
Kdo
Motif
Other DBs
NCBI-GeneID:
118250877
NCBI-ProteinID:
XP_035408319
LinkDB
All DBs
Position
2:complement(60287794..60340122)
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AA seq
1539 aa
AA seq
DB search
MPSTSEAAAGGGGSGGSRGWAGGGGGGGAEAGGDKKRLHHRRRKRFAAQPQPPPPPPPPA
PHPLLFPLLQPPLLQPPLLQPPLPPQSLLFLAATGASSCCGDGGERKRPRGKRRSGSRHK
RRRGRGGGGGGGGAQEAEKRRGGAGLGTLLEEYDDVSSQSEGLVGGGAAGAGGGGGGGGG
SGAGSPASSPGGRQRGEAERSSRSRREHRSSSGRSKERHREHRRRGDDKPQQEGAATSGR
GGAEAASSSSSSKSRSRHNHTGGQDREGLKSSSSSDRRKGSLASPGSGRKERESKAHRSR
TKATKEPPSAYKDPPKAYRDDKPEPKAYRRQRSSPSPGRDDSPPLHRSSQSQRSRKSLSP
VGGRSPLSPYSRRRSPSYSRHSSYERGGDVSPSPYSSWRRSRSPYSPVIRRSAKSRSRSP
YSSRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLAAELNKNKKARAAEAAKASAKASNT
STPTKGNTDTAASAPQVNNVKDLKKIKVEHAPSPTSSANLKNDKAKTKAPLPETKGENNL
IADKNTKQKAAAVKENKTTVVKQQPVTVKEKTKPSTPSVVTKEKDRIVALPTSTLPPLPL
PPTLPEDKDTDSSLRENLSVKTVKEAEKKLRHLLADLPLPPELPGGAELAKSPEEKKPAV
QLHSKRRPKICGPRHGETKEKEIDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVA
LKKVRLDNEKEGFPITAIREIKILRQLNHQSIINMKEIVTDKEDALDFKKDKGAFYLVFE
YMDHDLMGLLESGLVHFNENHIKSFMRQLMEGLAYCHKKNFLHRDIKCSNILLNNRGQIK
LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKP
IFQANQELAQLELISRICGSPCPAVWPDVIKLAYFNTMKPKKQYRRKLREEFAFIPPAAL
DLFDYMLALDPSKRCTAEQALQCEFLRDVEPSKMPPPDLPLWQDCHELWSKKRRRQKQMG
MTDDATATKVPRKDLSLGMDESRTNTPQGMQTSSQLKTQGNSSVALAKTSTGQQLNQNEV
AILLNLLQSKTSVSLAQFAQVLNIKVNPETQQQLNKINLPAGILSAGEKQSEQQQQPPPP
PPPPPEQEPLKQTTVTQPPVPPAQLSQPKVETDAAQAAVQSAFAVLLSQLIKAQQTKQKD
LVLEEKENGSGNEMSLQLRQPPEPTTPASVSRDDVESPAPGYPHLIKSLYTAAAGPEDLV
RQSEMRLLNRTPEQERPRILPPDQRPPEPPEPPPLTDEDLDYRTENQHLPISNSSGTDPH
AGVKAALLQLLAQHQAQATTEEPVQTSVDYQARDSYVTGPDYKDNFGSSTFSSAHYGSSD
GIGSGSSGALERRSFLGNSDIQPLDNYSTASSHSGGAPPPSAFSESFPSSVTGYGDIYLN
AGPMLFSGDKDHRFEYSHGPISVLGSSSDASAGPESTHPLPTKMHNYSYGSNLQENPGGL
GHMHGQTWTSPAQGPGYSQGYRGHISTSAVRGRGRGLPY
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcacctcggaggcggcggcgggcggcggcggcagcggcgggagccggggctgg
gccggcggcggcggcggcggcggggcggaggcgggcggcgacaagaagcggctgcaccac
cggcggcggaagcgtttcgcggcccagccgcagccgccccccccgccgccgccgcctgcc
ccgcacccgctgctgttcccgctgctgcagccgcccctcctgcagccgccgctcctgcag
ccgccgctgccgccgcagtcgctgctcttcctggcggccaccggcgcctcgtcgtgctgc
ggggacggcggggagcggaagcggccgcggggcaagcggcgctcgggctcccggcacaag
cggcggcggggccgcggcgggggcggcggcggcggcggggcgcaggaggcggagaagcgg
cggggcggcgcggggctcggcaccctgctggaggagtacgacgacgtgagctcccagtcc
gaggggctggtgggcggcggcgcggccggagccggcggcggcggcggaggaggaggaggc
agcggggcggggagcccggcctcctcccccggcggcaggcagcggggcgaggcggagagg
agcagccggtcccgccgggagcaccggagcagcagcggccgctccaaggagcggcaccgg
gagcaccggcggcggggcgacgacaagccgcagcaggagggggcggccacctccggccgc
gggggggccgaggccgcctcgtcgtcgtcctcctccaagtcccgcagccgccacaaccac
accggtggccaggaccgagagggactcaagagcagcagcagcagcgaccgcaggaagggg
tccctcgcctcgcccggcagcggcaggaaggaacgggagagcaaagcccaccggagccgg
actaaagcgaccaaggagccgccgtcggcttacaaggacccgccaaaagcctaccgggac
gacaagcccgagcccaaagcctaccggcggcagcgctcgtcccccagccccgggcgggat
gacagccccccgctgcaccgctcatcgcagagccagcggagccgcaagtccctcagcccc
gtgggcggccgctcgcccctcagcccctacagccgccgccgctcccccagctacagccgg
cacagctcctacgagcgcggcggggatgtgtcgcccagtccctacagcagctggcggagg
tcacggagcccctacagccccgttatccggagatcagcaaaatctcgaagcagaagtccg
tactcatcaaggcattcaaggtctcgtagcagacacaggttgtctagatccagaagtcgc
cattcgagtatctctcctagtacattgactctgaagagtagcctggctgctgagctgaac
aaaaacaaaaaagcaagagctgctgaggcagctaaagccagtgcaaaagcttccaacact
tcaacacctaccaagggaaacactgacactgctgcaagtgcacctcaagtgaacaatgta
aaggacctgaagaaaataaaagttgagcatgcaccttctcctacaagcagtgcaaatttg
aagaatgacaaggcaaaaacaaaggccccgcttccggaaactaaaggagaaaataattta
attgcagacaaaaatactaaacagaaagctgcagcagtaaaagagaataaaacaaccgtt
gtaaaacagcagccagtcactgtaaaagagaaaaccaaaccaagtacaccaagtgtagta
accaaggagaaggatcgcattgttgcactaccaacctccacactgccacccttgcctttg
cctcccacgctgcctgaagataaagacactgatagtagtctacgagagaatctttcagtg
aagacagttaaagaagcagagaagaaacttcgccatctgcttgcagacttgccacttcca
cctgagttgcctggaggagcagagttagccaaaagtcctgaagaaaagaaaccagcagtt
cagttacacagcaagagaagaccaaaaatatgtggaccacgacatggtgaaacaaaagaa
aaagaaatagactggggaaagcgctgtgtggataaatttgatatcattggtattattggt
gaaggcacttatgggcaagtttacaaagccagagataaagacacaggagaaatggtggca
ctaaagaaagtgcgtttggataatgaaaaagaagggtttccaattacagctattcgggag
attaagattcttcgacagcttaatcaccaaagcattatcaacatgaaggaaatagtgacg
gataaggaagatgctttggacttcaagaaagataaaggtgcattttacctggtgtttgaa
tatatggaccatgacttgatgggactgctggaatctggtttggttcattttaatgaaaat
catataaagtcatttatgagacagctgatggagggtttggcctattgccataagaagaac
tttttgcacagagatatcaaatgttcaaatattctactaaataatagagggcagataaag
cttgcagattttgggcttgctcggctgtacaactcagaagaaagccgaccatataccaac
aaagttattacattatggtatcggcctcctgaacttctgcttggagaagaaagatacacg
ccagctatcgatgtctggagctgtggctgcatcctgggtgaactttttacaaaaaagcca
atatttcaagcaaatcaagaacttgctcaactggaacttataagtcgaatttgcgggagt
ccttgtccagcagtgtggcctgatgttataaaattagcttatttcaacacgatgaaacca
aagaagcagtatcgtcgaaaactaagagaagagtttgctttcatcccaccagctgcatta
gatttgtttgattacatgcttgctctggatcccagcaagcgctgcacagctgaacaagct
cttcagtgcgagtttctgcgagatgtggaaccatctaaaatgcctcccccagaccttcct
ttgtggcaggattgccatgagctgtggagtaagaaacgcagaagacagaagcagatgggc
atgactgatgatgcaacagcaactaaagtccctcggaaggacctgtctctaggcatggat
gagagcagaaccaacacaccacaaggcatgcaaacttcttcccaactcaaaactcagggc
aactctagtgtagcacttgcaaaaacaagcactggacagcagttaaaccagaatgaagtg
gcaatcctgctaaacctgctacagtctaaaacaagtgttagtttggcacagtttgcccaa
gtgttgaatattaaggtaaacccagagactcagcagcaactaaataaaataaatcttcct
gctggaattttgtcagcaggtgaaaaacagtcagaacagcagcagcagccgccgccgcct
ccgccaccaccaccggaacaggagcctctaaaacagacgaccgtcacgcagcctcctgtg
ccccctgctcaactgagtcagcccaaagtcgagactgacgctgcccaggcagccgtacag
agtgcatttgctgttctgttgtctcagttaataaaggctcagcaaacaaaacagaaagat
ctggtgttggaggagaaggaaaacggatcaggaaatgaaatgtcgttacaactcaggcag
cctccagagcccaccactcctgcatctgtcagccgggatgatgtggaatcgccagcaccc
ggttacccgcacctgatcaagtcactgtacacggctgctgcaggtccagaggatttggtt
aggcagtctgagatgaggcttctgaaccgaacacccgaacaagaacgccctcggatcttg
cctccagaccagcgacccccagagccaccggagcctccgcctctcactgatgaagatctt
gattatcggacagagaaccagcatttgcctataagtaactcttcaggaacagatccccac
gcaggagtgaaagcagctcttctacagctgcttgctcagcatcaagctcaggcaacgacg
gaggagccagtacaaacgagcgtggattaccaggctagagactcctatgtaacaggccca
gactacaaggataactttggatcgtctaccttctcctctgcccactatggcagtagcgat
ggcataggaagcgggtcatcgggagcattagaaaggaggagcttcctcggaaactcggat
attcagcctttggataactacagtactgcttcatctcactctggtggtgcccctcctcca
tctgccttttcagaatcctttcccagctcagtaactggttacggagacatttacctcaac
gctggccccatgctattcagtggagataaagaccataggtttgaatacagccacggccca
atctcagtcctggggagcagcagcgacgcttctgcagggccagagagtactcatcctctg
cccaccaagatgcacaactacagctacggaagtaacttacaggaaaaccctggtggcctc
ggccacatgcatggacagacttggacttcccctgcccaaggacctggctattcccaagga
tacaggggacacattagcacgtctgcagtgagagggcgaggcagaggattaccatattga
DBGET
integrated database retrieval system
