Cygnus atratus (black swan): 118250920
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Entry
118250920 CDS
T09349
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03430
Mismatch repair
cata03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118250920 (MLH1)
03460 Fanconi anemia pathway
118250920 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cata03400
]
118250920 (MLH1)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
118250920 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Nrap
Motif
Other DBs
NCBI-GeneID:
118250920
NCBI-ProteinID:
XP_035408432
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Position
2:complement(64381711..64398020)
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AA seq
822 aa
AA seq
DB search
MDTCLTQLRGALPLGANGPGRAAVSLHRRKALRRPPFSRLPPLLGRAALTPRPLWPRSGQ
GPAPVAAAMAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGG
LKLIQVQDNGCGIRKEDLNIVCERFTTSKLQKFEDLSSISTYGFRGEALASISHVAHVTV
TTKTADAKCAYRASYSDGKIKAPPKPCAGNQGTQITVEDLFYNVNTRRKALKNPSEEYAK
ILEVVGRYAIHNSGISFSVKKQGDTVSDVRTLTNASTVDNIRSIFGNAVSRELIEVGCED
ANLAFKMKGYITNANYSVKKSIFLLFINHRLVESTALRKAIETVYAAYLPKSTHPFLYLS
LEIAPKNVDVNVHPTKHEVHFLHEDSILERVQQHIENKLLGSNSSRMYFTQTLLPGAECS
SSEVVKSAANLSAATKGSSDKIYAHQMVRTDAREQKLDAFLQPVNNPLSTGPAEGTVGVN
AAPPEGPARLQDAEMEDVSDFEIADILEAAEVQQDMAMPGELSKSRRLSPEKVLPRKRPR
EDTDIEMEKDVSRKEMTAACTPKRRIINLTSVLTLREEISSRVHESLQEMLRDHSFVGCV
SPQWALVQYQTKLYLLNTTKLSQELFYQILIYDFANFGVLRLSEAAPLYELAMLALEDPE
SGWTEEDGPKEGLAEYIVEFLKKKAEMLKDYFSLEIDEEGNLIGLPLLIDNYIPLLEGLP
MFILRLATEVNWDEEKECFESLSKELSLFYSIRKQYLIDEITLTHSQNEDSDSASPPWKW
TVEHVVYKAFRTYLLPPKHFTDDGNILQLANLSDLYKVFERC
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggacacttgccttacccaattgcgaggcgcgctgccgcttggcgcgaacgggccgggg
cgcgcggctgtttccctccaccgtcgcaaggctctgaggcggccgccattttctcgcctc
ccccctctgctcggccgcgccgccctcaccccccggcccctttggcctcgcagcgggcag
ggccccgctcctgtcgcggcggcgatggccggcgtgatccggcggctggatgaaactgtg
gtgaaccgcatcgcggccggcgaggtcatccagagaccggcgaatgccatcaaagagatg
atagagaactgcttggatgctaaatctacaagtatccaggtagtagttaaagaaggtggg
ctgaagctcatccaagtccaagataacggctgtggtatcagaaaagaagatctcaacatt
gtatgtgagagatttactacgagtaaactacaaaaatttgaagacttgtctagtatttct
acatatggtttcaggggtgaggcattggctagcatcagtcatgttgcccatgttacggta
acaactaaaacagctgatgcaaagtgtgcatacagagcttcttacagtgatggaaaaatt
aaagcccctccaaaaccctgtgctggaaaccaagggacgcagatcacggttgaagatctc
ttttacaatgtaaatacacggaggaaagctttaaaaaatccaagtgaagagtatgcaaaa
atactagaagttgttggcaggtacgccatccataactcaggtatcagcttttcagttaaa
aagcaaggtgataccgtgtcagatgttagaactttaacaaatgcctcaacagtggacaac
attaggtccatctttggaaatgctgttagcagggaattgatagaagtgggctgtgaagat
gcaaatctggcctttaaaatgaaaggctacatcacgaatgcaaattattctgtgaagaaa
tctatatttttactcttcataaaccatcgactggtagagtcaacagctttgcggaaggcc
atagagactgtgtatgctgcttacttgccaaaaagtacgcatccattcctatacttaagc
ctggaaatagctcccaagaatgtagatgtgaatgtgcaccctacaaaacacgaggtccac
ttccttcatgaagacagcattctagagcgtgtgcagcaacacatagagaacaagttactg
ggctctaattcctcaaggatgtacttcactcagacgttgcttccaggggctgaatgttct
tccagtgaggtggtaaaatcagcagcaaacctttccgcggccacaaaaggaagcagtgat
aaaatctatgcacaccagatggtccgcactgatgcccgagagcagaaactggatgctttc
cttcagccagtgaacaatcccctaagtacaggccctgctgaagggacagtgggggttaat
gcagcacctccggagggtcctgccaggctgcaggatgctgaaatggaagatgtcagtgat
tttgaaatagctgatatccttgaagcggctgaggttcagcaggacatggcaatgcctgga
gagctgagtaagagtagacgcttgtctcccgagaaagtacttcctcgaaagagaccccgg
gaagacactgacatagaaatggaaaaagatgtttccagaaaggagatgactgctgcctgc
acccctaaaagaagaattatcaatttgaccagtgtgttgactcttcgggaggaaattagc
agccgggtgcatgaaagtcttcaggaaatgctacgtgatcactcatttgttggctgtgtc
agccctcagtgggctctggtgcaatatcagacaaaactgtatcttctcaatacaacaaaa
ctcagccaagaactcttctaccagatacttatttatgactttgcaaactttggagtctta
aggctctctgaggcagctcctttatatgagcttgcaatgcttgctttagaggaccctgag
agtggctggacagaagaagatggcccaaaagaaggtcttgctgagtacatagttgagttt
ctgaaaaagaaggctgaaatgctgaaagactatttctctcttgaaattgacgaggaagga
aatcttattggcttgccacttctgatagataattacattcccctgttggaaggactacct
atgtttatccttcgtctggccacagaggtaaactgggatgaagaaaaggagtgctttgaa
agcctgagtaaagaactctctctgttttactccattagaaagcaatatttaatagatgaa
atcaccctgacccactcccagaatgaggattctgactctgcttcaccaccatggaaatgg
actgtggaacacgttgtttataaagcttttaggacttaccttttacctcctaaacacttc
acagatgatggcaacatcttgcagcttgctaacttgtctgacctgtataaagtttttgag
agatgttga
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