Cygnus atratus (black swan): 118251143
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Entry
118251143 CDS
T09349
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cata01009
]
118251143 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118251143 (SH3RF1)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118251143 (SH3RF1)
Protein phosphatases and associated proteins [BR:
cata01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118251143 (SH3RF1)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118251143 (SH3RF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-Nse
zf-MIZ
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
118251143
NCBI-ProteinID:
XP_035408884
EnsemblRapid:
ENSACYG00000000879
LinkDB
All DBs
Position
4:26597224..26682082
Genome browser
AA seq
873 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRNELRCPECRTLVDCGV
DELPSNILLVRLLDGIKQRPRKPGTGGGTGGTNALRVPITTVANCGSKELPSSQVGQQQR
VQARSPPVRGVPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGIHGF
FPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEGML
ADKIGIFPISYVEFNTAAKQLIELDKPSGSAVDSGEGTSGAAHNNSVQKHTDTKKNTKKR
HSFTSLTMSNKSSQSSQNRHSMEISPPVLISSSNPTAAARISELTGLSCSAPSQVHIGTT
GLIVTPPPSSPVTTGPSFTFPSEVTYQAALSNMNPPLPPPPLLSAAIIASASSGPQSAGV
IQRPTSGSADQMTHLRPQTRPSVYIAIYPYTPRKEDELELRKGEMFLVFERCQDGWFKGT
SMHTSKIGVFPGNYVAPVTRTVTSASQTKVPMSTAGQTGRVVTMVSPSTASGTSQKLQGN
GVAVNSSTVPTAVVSAAHIQTSPQTKVLMHVTGQMTVNQARNAVRTVAAHNQERPTAAVT
PIQAQSPTCLIPAAVIIPHHSVASQQLQPQLPNTAAYVTAVNVNRSTIPLACATASLNSP
SVAASSLEGDISGKTVNTHPGAPASPESALAAGGSAAVSKADKDGKKEKKGLLKLLSGAS
TKRKPRLSPPASPTLEAEQAAAELALQGAVGPELPAAGGHSKAGSCPTDCEVSGLAQETQ
HRKTSSLDSAIPIAPPPRQPCSSLGPVLNESRPLVCERYRVVVSYPPQSEAELELKEGDI
VFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcagctctgctggatctgctggagtgccctgtgtgcctagagcgccttgat
gcttctgccaaagtcctgccctgccagcacaccttctgcaagcgctgtctgctgggcatc
gtcagctctcgaaacgagcttcggtgccccgagtgcaggactttggtggactgcggcgtc
gatgagctccccagtaatattttgcttgtcagactactggatggcatcaagcagaggcct
cggaaacctggcaccggcggtgggacaggtggcacaaacgctttaagggtcccgattacc
actgttgctaattgtggctcgaaggagctgccgagctcacaagttggacagcagcaaagg
gtgcaggcgcggagccctcctgttcggggtgtacctcagttaccgtgtgccaaagcattg
tacaactatgagggaaaagaacctggagatcttaagttcagtaaaggagacatcatcatt
ttgcgtcgacaggtggatgaaaattggtatcatggagaagtcaatggcatccatggcttt
tttcctaccaactttgttcagattattaaacctttacctcaacctccgcctcagtgcaaa
gcactttatgactttgaagtaaaagacaaggaagcagataaagactgtttaccatttgca
aaggatgatgttctgactgtaatacgccgagtggatgaaaactgggcagaaggaatgctg
gctgacaagataggaatatttccgatctcgtatgttgagtttaacacagcagccaagcag
ctgatagaattggataagccctcaggttctgctgtagactctggagaaggtacctctggg
gcagcccacaacaattcagtccaaaagcacaccgatacaaagaaaaacaccaaaaaacgg
cactcttttacctccctcacgatgtccaacaagtcttcacagtcttctcagaatcgccac
tcaatggaaatcagtcctcctgtcctcatcagctccagcaacccaactgcagcagcccgc
ataagtgagctgacgggactttcttgtagtgccccttctcaggttcatattggtactaca
gggctaattgtgactccaccgcctagcagcccagtcacaacagggccttcatttaccttc
ccatcggaagttacctaccaagctgctcttagtaatatgaatcccccacttccaccacca
cctctcttgtctgctgcaatcattgcatcagcttcttctggacctcagtctgcaggtgta
atacaaaggccgacatcaggatcagctgaccaaatgacacatttacgaccacaaactcgt
ccaagtgtatatattgctatatacccttacactcctcgaaaggaggatgaactggaactg
cggaagggagaaatgttcttggtatttgaacgctgccaagatggctggttcaagggaact
tccatgcacacaagcaagattggtgtttttcctggcaattacgtggctccagttacaagg
acagtgacaagtgcatcacaaacaaaagttcccatgtctactgcgggccaaacaggacga
gtggtaactatggtcagcccttccactgctagtggaacatctcagaagctccaggggaac
ggtgtggcagtgaactccagcacagtacccacagctgtggtttctgcagcacatatccaa
actagtccacaaaccaaggtccttatgcacgtgacaggacaaatgacagtcaaccaggct
cgcaacgcagttagaacagttgctgcacacaatcaagaaagacctacggcagcagtcaca
cccatacaagcgcagagtccaacatgccttattcctgcagctgtgatcattccccaccac
tctgttgcctcccagcagctccagccccagcttccaaatactgctgcttacgtcacagct
gtaaatgtgaaccgctcaaccatccctctggcatgtgcaacagcttctttgaattctccc
agcgttgctgcttcatctttggagggagatattagtgggaaaactgtaaacactcaccct
ggagctcctgcatctccagagagtgctttagcagctggtggaagtgctgctgtcagtaaa
gcagacaaggatggcaagaaagaaaaaaaggggttgctgaagctgctttctggagcatcc
accaaacgcaagccccgcttgtcacctccggcatcaccaactctggaggctgagcaagca
gctgcagagttagccctgcaaggtgcagttgggccagagcttccagcagcaggtggtcac
agcaaagctggatcctgtcccaccgactgcgaggtctctgggctggcgcaggagacgcag
catcggaagacaagttccctggattccgctattccaatagcgccaccgcctcggcagccg
tgctcgtccctgggtccggtcctgaatgagtccaggcctcttgtctgtgaaaggtacaga
gttgtggtgtcctatcctcctcagagtgaagcagaacttgaacttaaggaaggtgacatt
gtttttgtacacaaaaaacgtgaggatggctggttcaaaggcactctgcaacgaaatgga
aaaactggccttttccctggcagctttgtagagaacatttga
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