Cygnus atratus (black swan): 118251237
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Entry
118251237 CDS
T09349
Symbol
CHD7
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118251237 (CHD7)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118251237 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
118251237
NCBI-ProteinID:
XP_035409059
LinkDB
All DBs
Position
2:121898256..122026217
Genome browser
AA seq
3012 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPMDQGFPSLQSSLHHPPAN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMISNAPGNGIASPHSQYHNPPVPQVPHSSGAS
GQMGVYPSMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQPQPQPTQPSQAPSGP
PGQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHLS
HVPQQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRS
QTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSN
SGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPG
SAGIPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQNRPFLGMSSTPREMGGHMR
PNGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGIHHQSSPPPHPHH
QPWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGPNTQLVKSDDYLPSIEPQP
QQKKKKKKNNHIAAEGPSKSFGKEDFPGGLDSQNLTRNSVDCSQEEKKKKKKPKAKKEPK
DPKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKNSNKKTDSETSAAKKKVNKG
KEGSENSDLEKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAA
GRDSPSNTSQSEQQESADAEGPVVEKIMSSRSVKKKMENGEEVEVEEFYVKYKNFSYLHC
QWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEVXLFLFNPDYVEVDRIMDFSRSTDDNG
EPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDWKKSES
SREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGP
FLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFH
AIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQ
NTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL
APKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLI
NGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRC
LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA
DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV
LQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTI
TIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRV
RKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGW
GRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRA
LVNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNKV
LLRVRMLYYLRQEVIGDQADKILEGADSSEVDVWIPEPFHAEVPADWWDKEADKSLLIGV
FKHGYEKYNSMRADSALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYK
PTRTPFKDEIDEFANSPPEDKEESIEIHPSKHSESNAELGQLYWPNTSTLTTRLRRLITA
YQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVS
TFGIIFDPIKHQFDWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPDL
STLIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKD
LLIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGTGSANTVSSLNPLGAGCSQTPPI
VPSTPVQEEKTTEQTESKVEGSENPAAKEKSDIKEETEVADKDTKQDCDAEAEPGSVKCE
LKDIETSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGAVSQGKNFDEESNASMS
TARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRR
QMFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQASISGSEDITASPQLSKEDALNLSVP
RQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSN
FSSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRRK
NVEGLDLLFMSNKRTSLTVEDAEVTKAFEEDMESLPARNIPSPGQLDPDTRIPVINLEDG
TRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLD
INTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPE
SMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTS
LQNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLLN
NPITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTDTVSATDSANGSVSAA
TAATTATATTTTTTNTGLPANPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALA
GLQNAVGSNEEKATDKTEGTAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGXELDSLD
GGEEIENNENDE
NT seq
9039 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagcgaaggg
ctggaaggtcttggagaatgtggatatcctgaaaacccggtgaatcctatggggcagcaa
atgcccatggatcaaggatttccctctttacagtcgtctcttcatcacccccccgcaaat
caaaatcaagcaaagttgacccattttgatcactataatcaatacgaacagcagaaaatg
cacctgatggatcagccgaacaggatgataagcaatgcccctgggaacggtatagcgtct
cctcattcgcagtatcacaaccctccggttcctcaggttcctcacagcagtggtgccagt
ggtcagatgggagtctatcctagcatgcagaacgaaagacacgggcaacccttcgtagac
agcggctccatgtgggggccgcgggcggttcaagtgccagaccagatcagagcaccctac
cagcagcaacagcagccgcagccgcaaccgacgcagccgtcgcaggcaccctctggaccc
cctgggcagggccaccctcagcacatgcagcagatgggaaactacatggctcgcggcgat
ttttcaatgcagcagcacggtcagccgcaacagcaaaggatgaaccagttttctcaaggc
caagaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttgtct
catgtgccccagcagaatcccagtatggcaccttctttgcgacactcagtccagcaattt
caccaccatccccccactgctctccatggagaatcagtagcccacagtcccagattctcc
cctaatcctccccagcagggtgctgttcggccgcaaacacttaattttagttctcggagc
cagacggtaccctcacctactataaacaactcagggcagtattctcgatatccttacagt
aaccttaatcagggattagttaataatacagggatgaatcagaatttaggccttacaaat
aacactccaatgaatcagtctgtaccaagatacccaaatgctgtaggatttccatcaaac
agtggtcaaggactaatgcaccagcaacccatccaccctagtggctcacttaaccaaatg
aacacgcaaactatgcacccttcacagcctcagggaacttatgcctctccacctcccatg
tcacctatgaaagcaatgagtaatccagcaggtacacctcctccgcaggtcagacccggt
agcgctggaataccaatggaagttggcagttatccaaatataccccatcctcagccgtca
caccagccccctggtgccatgggaattggacaaaggaatatgggcccccgcaacatgcaa
cagaatcggccgtttctgggtatgtcttcaacaccacgggagatgggtgggcacatgaga
ccaaacggttgtccaggtgttggccttgcagatccacaagcaatacaagagcgactaata
tctggccagcagcttcctagtcaacagcagtcttttcaacagcaaatgccaacctgtcct
cccatgcagcctcatccagggatacatcatcagtcttcaccaccaccacatcctcatcat
cagccttgggcacagcttcaccagtcaccacaaaacacaccgcaaaaagtgcctgtcctt
cagcattctccgtcggaaccctttttagagaaaccagtgccggatatgactcaggttagt
ggaccgaatacccagctagtgaaaagtgatgattatctgccgtcgattgagccgcagcca
cagcaaaagaaaaagaaaaagaaaaacaatcacattgctgccgaaggtcccagtaaaagt
tttggtaaggaagactttcctgggggacttgatagccagaatctaaccaggaactcagtg
gattgctcccaagaagagaagaagaaaaagaaaaagcccaaggcaaaaaaagaaccgaag
gatccgaaagaacccaaggaaaagaaggaacccaagacccccaaagtccctaagacccct
aaagagccaaaggaaaagaaagcaaaaaataccacgccaaaacccaagaccagcaaaaag
aatagtaacaagaaaacagattctgaaactagtgctgcgaagaaaaaggttaacaaggga
aaggaaggttctgaaaactcagatttggaaaaaactccaccaccatcacctcatccagaa
gatgaagatgacccaggggttcagaagcgacgctccagcagacaagtgaaaaggaagcgt
tacacagaagacctggagttcaagatttcagatgaggaggcagatgatgctgatgctgct
ggaagagactctccttcaaacacttctcagtcagagcaacaggaatctgctgatgccgaa
ggtcctgttgtggagaaaatcatgagtagccgttcagtcaagaaaaagatggaaaatgga
gaggaggtggaagtagaggaattctatgtaaagtacaaaaacttttcttaccttcattgc
cagtgggcatctgtggaagagctggacaaagacaagagaattcagcagaagattaagcgg
tttaaggcaaaacagggccagaacaaattcctttcagaagtatgattgtttctttttaat
ccagattatgtggaagttgatcgaatcatggatttttcacgtagcacagatgataatgga
gagcctgtaacgcattatctggtgaaatggtgttcgcttccttatgaagacagcacttgg
gagctcaagcaagacatcgaccaagctaagattgaagaatttgagaaactgatgtctagg
gagccagaaatggagcgtgtggagcgacctcctgccgatgactggaagaaatcggagagt
tccagggagtataaaaacaataacaaactcagggaataccagttggagggagtaaactgg
cttcttttcaattggtacaacacacgaaactgcattttagcagatgaaatggggttggga
aagactatccagtccattacgtttctctatgagatatatttgaaaggaatccatggtcct
ttcttggttattgcaccgttgtccacaattcccaactgggaaagggagttccgcacctgg
acagaattgaatgtggttgtgtatcatgggagtcaagcaagccggcggaccattcagttg
tatgaaatgtatttcaaagatccacagggtcgcgtgataaaggggtcctacaaattccat
gccattatcacgacatttgaaatgattttgactgactgcccagagctgcgtaacattcca
tggcgttgtgtggtaatcgatgaggcccacaggctgaaaaacaggaattgtaagcttttg
gaaggactcaagatgatggacctggaacataaagtgctgcttacaggaactcctttgcaa
aatacagtagaagagctatttagcttgcttcactttttggaaccaggtcgtttcccatca
gaaaccacattcatgcaagaatttggggatctgaaaactgaagaacaggtgcaaaaactg
caagctattttgaagccgatgatgctgagacgtctcaaggaggatgtagaaaagaacctg
gcccccaaggaggaaactatcattgaagttgagctgacaaatattcagaagaaatattat
cgtgctattcttgaaaagaatttcacgtttctttctaagggtggaggtcaggcaaatgta
cctaatcttttaaacactatgatggaactaagaaaatgctgcaatcatccgtaccttatt
aatggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctcca
gattttcagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctg
ctgccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgc
ttggacatactggaagactacctcattcaaagacggtacccatatgaacgaattgatggc
cgagtaagaggcaacttgcgtcaggcagctattgacaggttttcgagacctgattctgat
aggtttgttttcctgctgtgtacaagggcaggaggtttgggcattaatcttactgctgct
gatacctgcatcatttttgattcagactggaacccccaaaatgacctacaggctcaagca
cgatgtcacagaataggacagagcaaatcagtgaaaatttacaggttgataacaaggaat
tcttatgaaagggaaatgtttgacaaagctagcttgaagcttggcctcgataaggctgtg
ctacaatctatgagtggaagagaaaatgctacaaatggggtgcaacagctttctaagaaa
gaaatagaagatcttcttcgaaagggggcatatggtgctctgatggacgaagaagatgaa
gggtctaagttttgtgaagaggatattgatcagattctcttaaggcgaacacacacaatt
actattgaatctgaaggaaaaggctcaacgtttgcaaaggctagttttgttgcatctggg
aacaggacagacatttctttggatgaccctaatttttggcagaagtgggcaaagaaggct
gagctggatattgatgctttaaatggaaggaataacctagtcattgatacaccaagagta
agaaagcaaactagactctacagtgcagtcaaagaggatgaactgatggagttttcagac
ctggaaagtgattctgaagaaaagcctagcacaaagccccgtaggcctcaggacaaatca
cagggatatgcaagaagtgaatgtttcagggtagagaagaacttgttggtttatggctgg
ggtcggtggactgacatcctctcacatgggcgctataaacgtcagctaacagaacaagat
gtggaaaccatctgccggactatccttgtatattgtcttaatcattacaaaggggatgaa
aatatcaaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcgagct
ctggttaatcattccggtctatctgcaccagtgcccagagggaggaaaggcaagaaagta
aaagcccagagttcacagccaatgcttcaagatgctgattggctcacaacctgtaatcca
gatgtgttatttcaagaagacagctataggaaacatctcaaacatcattgtaataaggtc
ctgctgcgtgtccgcatgctgtactatctacgacaagaagttataggggaccaagcagac
aagatcttagagggtgctgactcaagtgaagtagatgtgtggatacctgagccattccat
gctgaagttcctgcagactggtgggataaggaggcggataaatcccttttaattggagta
ttcaaacacggttatgagaagtacaattccatgagagctgattctgcactgtgctttctg
gaacgggttggcatgcctgatgcaaaggccatagcagctgaacagagagggacagacatg
ttagcagatggcggtgatggaggtgaatttgacagagaggatgaagatccagaatataaa
ccaaccagaactcctttcaaggatgaaattgatgaatttgcaaactcacctccagaagac
aaagaagagtccatagaaatccacccaagcaagcacagtgaaagcaatgcagagttaggc
caactctactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattactgcc
tatcagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccgc
aggagacgtcggcctcgggaagaagtgagggcactagaagcagaaagggaagctataata
actgaaaaacgacaaaaatggacaagaagagaagaagctgatttttatcgtgtggtgtct
acttttggaattatttttgatcctataaaacatcagtttgactggaatcagttcagagcg
tttgccagacttgataaaaagtccgatgaaagtttggaaaagtattttaacggctttgtg
aatatgtgtagacgagtgtgccggatgccagtcaaaccagatgatgaaccgcctgatctt
tctactctgattgagccgatcacagaagaacgtgcttccagaactttatatcgcatagaa
ctgttacggaaaatccgtgaacaggttcttcatcacccacagttgggagagaggctaaaa
ctttgccaaccaagcttggacctgccagagtggtgggagtgtggtaaacatgacaaagac
ttactgattggtgctgctaaacatggagtcagtaggacagattatcacattcttaatgat
cctgagctctcttttcttgaggcccacaaaaactttgctcagaacagagggacaggtagt
gcaaatactgtctcttctctaaaccctctgggtgctggctgcagtcaaacaccacctatt
gtcccatccacaccagtacaagaagaaaagactacagaacaaacagagtctaaagttgaa
gggtctgaaaatccagcagccaaagaaaagtctgatatcaaagaagagacagaagttgca
gataaggacactaaacaggactgtgatgctgaggctgagcctggctctgttaaatgtgaa
ttgaaagacatagaaacaagtacagacgtagacccaaaatctatttcggaaaaaggctca
gaagaagatgaagaagagaaactggatgatgacgacaaatcggaagaatcctcccaacct
gaagcaggagcagtttctcagggtaagaattttgatgaagaaagcaatgcctctatgagt
accgcaagggatgaaacacgcgatggattctacatggaagatggggatccttctgtggtt
cagcttcttcatgagagaacgtttgccttttctttctggcctaaggaccgagtaatgatc
aaccgattagacaacatctgtgaagcagtgctgaaagggaagtggccagtaaataggcgc
cagatgtttgatttccaggggctcatacctgggtatactccaacagctgtggacagccct
ctacaaaaaaggagctttgcagagctctccatggttggtcaagccagcatcagtggcagt
gaagatatcactgcttctcctcagttgtcaaaggaagatgcactgaatttatcggttcca
cgtcagaggaggaggagacgaagaaagattgaaattgaggctgagagagctgctaagagg
agaaatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcagaaaatgga
caagaaaaggttgtagatttatcaaaggcctcacgagaggcaacaagttctacctcaaat
ttttcatctgttacttcaaagtttatcttgcctaatgtctccacacccgtgtctgatgcc
tttaaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcatcta
ctaaatggctctttaatagatggagaaccgcccatgaagaggaggagaggaaggaggaaa
aatgtagaagggcttgatctgttatttatgagcaacaaacggacatcattgactgtagag
gatgcagaagtgaccaaagctttcgaagaagatatggagtccctaccagcaaggaacatt
ccatctcctggtcagctagacccagacactcgcatccctgtaatcaatctagaggatggg
accaggctggtgggagaggatgctcccaaaaacaaggatttagttgaatggcttaaactg
catcccacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctgttt
tccccatttcagaagccgaaacaaaaacgacacagatgtcgaaaccctaataaactggat
ataaacaccttgacaggagaagaaagggtacctgttgtaaataagcgaaatgggaagaag
atgggtggagctatggcccctccaatgaaggacttgccaagatggttggaagaaaatcct
gaatttgctgttgctccagattggactgacattgttaaacagtctggttttgttccagag
tccatgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcagaaga
ggaagaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagcgtca
acttcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcaccagc
ctccagaatctacagaacctgcagtctctccagctcgcaggcctcatgggcttcccgcca
gggctagcaacagctgctgctgccgggggggatgctaaaaatccggctgccatgttgcct
ctgatgctgccagggatggcaggattgcccaatatgtttggactaagcggattgttgaat
aacccgataacggctactactggaaatgccactactgcttccggtcaaggagagactgag
gatggcgcttcaaaagctgaagagaagaaaaacgagaatgaagaggagaacaaagactct
gagaaaagcacagacactgtttctgctactgactctgcaaatggatctgtcagtgctgct
actgcggcgactaccgccactgccaccactaccaccaccaccaacactggattgcccgca
aaccctctggccttcaatcccttcctgctgtctaccatggctcctggcctgttctatcca
tctatgtttctacctccaggactgggaggattgactctgcctggtttcccagcactagca
ggacttcagaatgcagtgggctccaacgaagagaaggctactgacaaaactgaaggaact
gcctttaaagatgaagaaaacctagaaggcagtgatgcagaggagagccttgataaaact
gcagattcctccgttttagaagatgaaatagcacagggtnaagaattagactcacttgat
gggggggaagaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
