KEGG   Cygnus atratus (black swan): 118251365
Entry
118251365         CDS       T09349                                 
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
cata  Cygnus atratus (black swan)
Pathway
cata03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:cata00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    118251365 (PCDH20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cata01009]
    118251365 (PCDH20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cata04515]
    118251365 (PCDH20)
Protein phosphatases and associated proteins [BR:cata01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118251365 (PCDH20)
Cell adhesion molecules [BR:cata04515]
 Cadherins
  Protocadherins
   118251365 (PCDH20)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th SGBP_BT4661-like He_PIG
Other DBs
NCBI-GeneID: 118251365
NCBI-ProteinID: XP_035409305
LinkDB
Position
1:172322375..172328643
AA seq 951 aa
MGTVSGCRGEERRRAGGGAGALLGRSRRRRPGMGPPGSRGSTSSSRGSLQHLLLFLLFVG
PFNCFASYSRATELFYSLNEGLPAGVLIGSLARDLRLPMAGGQRPTAPQPPLSFTLASRG
LGGQYVHLDNRSGELHTSALEIDREALCMENGGATVFGEADSTSSSSSSSLSSESCLLLL
DVLVLPQEYFRLVKVKIAIRDVNDNAPHFPVPHICLSVPENAPVNTRLAIEHPALDPDVG
TNGVQTYRLRDNYGVFTLDVEENESGERTPYLIVMGALDRETREEYVTVIIAEDGGTPPL
VGSATLTIGISDINDNCPQFSDSQLNVTLYGNSSLGTHVATVHAEDLDLGSNAEITYSYS
QKVPQPSRDLFHLDESTGAITLSRKIDGDAPRLHRLIILGNGPGCIPAVITVLVTIIKVM
MRPPEVVPRFIANEVEGVVYLKELEPINTPIAFFTIKDPDEKYKVNCYLDGDGPFRLSPY
KPYNNEYLLETTKPLDYETQQLYEISVVAWNSEGFNVNKIIKIQVLDDNDNSPVFSQQLI
ELSIEENNVPNAFLTKLHATDADSGEGGEVSYFLGPDAPSYFSLDKTTGVLTVATQLDRE
EKEKYRYTVKAVDSGFPPRESIATVTITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGV
ISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVLRAKVSLDREQQSSYVLWIEAVDGGDP
ALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIESLLRKDPDINIEEKQPQISIEPTHQKMESASCMPTLVALSIISLGS
IALVTGMGIYICLRKGKKHHRADENMEVQIPLNGRINLHMLEKKPMEISNI
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgggcacggtctcgggctgccgcggggaggagaggcgccgggcgggcggcggagcgggc
gcgctgctggggcgcagccggcggcggaggccgggcatggggcccccgggcagccgcggc
agcaccagcagctcccgcggcagcctccagcacttgctcctcttcctcctcttcgttgga
cctttcaactgcttcgccagttacagccgcgccactgagctcttctacagcctcaacgag
gggctgcccgccggggtgctcattggcagcctggcccgtgacctgcggctgccaatggct
ggcgggcagcgccccacagccccccagccacccctctccttcaccctggcctcccgtggc
ttggggggacagtacgtgcatctggacaaccgctccggagagctgcatacctcggccctg
gagatcgaccgggaggctctgtgcatggagaatggtggggccactgtctttggggaggca
gatagcacgtcctcctcctcctcctcctcactctcgtccgagtcatgcctgctgctgctg
gacgtgctggtgctgccgcaggagtacttccgcctggtgaaggtgaaaatcgctatccga
gatgtcaatgacaacgctccccacttccctgtgccccacatctgcctctcggtgcctgag
aacgcacctgtgaacacccgcctggctattgagcaccctgcccttgaccccgacgtgggc
accaatggtgtccagacttaccgtctgcgagataactacggtgtcttcaccctggacgtg
gaggagaatgaaagcggagagaggaccccctacctgattgtcatgggggctctggacaga
gagacacgggaggagtatgtcacggtcatcattgctgaggatgggggcactcctccgcta
gtgggcagtgctacgcttactattggcatcagcgacatcaatgacaactgcccccagttt
agcgactcgcagctcaacgtcaccctttatgggaattccagcctagggacacatgtggcc
actgtccatgcagaagacctggaccttgggtccaatgcggagatcacctactcctacagc
cagaaggtccctcagccatccagagacttgttccacttggatgaaagcacaggagccatc
actctctccagaaagattgatggggacgccccaaggctccacaggctgatcatattgggc
aatggtcctggttgtatccctgctgtgatcacagtgctagtgaccatcatcaaagtcatg
atgaggccacctgaagttgtccctcgtttcatagctaatgaagtggaaggagtggtgtac
ttaaaggaattggagcctattaacacaccaatagcattttttaccatcaaagaccctgat
gaaaaatacaaagttaattgctatttggatggtgatgggccattcagactttcaccatac
aagccatacaacaatgaatacctcttagagaccacaaaacctttggactatgagacacag
cagctgtatgaaatctctgtagttgcatggaactcagaaggatttaacgtaaacaaaata
atcaaaatacaagttttggatgacaatgacaactcaccagttttctctcaacagctgata
gaattatccattgaggaaaacaatgttcccaatgctttcttgaccaaactgcatgctaca
gatgctgacagtggagaaggaggggaagtgtcctattttttagggcctgatgctccttcc
tatttttctttggataaaaccacaggagttcttacagttgccactcaactggacagagaa
gaaaaggagaaatacagatatactgtgaaagcagtagattctgggttccctccaagagag
tcaatagcaactgtcaccatcactgtgttggataaaaatgataatagtccaagattcatc
aataaggatttcagcttttttgtgccagaaaactttccaggttttggtgaaatcggagtt
atcagtgtcacagatgctgatgcagggcaaaatggatgggttgccctttcagtcctgaat
ggaagtgatatttttgtcatagatactggaaaaggagttttgagagctaaagtctccctg
gacagggaacagcaaagctcctatgtgctgtggatcgaagcagttgatggtggtgatcct
gcgctgtcttctactgcaaaaataactatccttcttctggacataaatgacaacccccct
ttggtattgtttccacagtctaatatgtcttatttgttggttcttccttctacccttcct
ggctctcccatcactgaggtctatgctgtcgataaagacactggcatgaatgcagtcata
gcatacagcatcataggaagaagagggccccggccagagtcatttagaattgaccctaaa
actggtaatatcaccttggaagagtcgctcatgcaaaatgactatggcctgtatcgactg
cttgtaaaagttagtgatcacggctatccagaacctctccattccactgtcatggtgaat
ctcttcgtcaatgacacagttagcaatgagagctacattgaaagtttattaagaaaggat
cctgatatcaatatagaagaaaagcagccgcaaatatccatagagcctacacatcaaaaa
atggagtcagcatcctgcatgcctactttagtagctctgtcaataataagcttgggttca
attgctttagtaactgggatgggcatttacatctgtctgagaaaagggaaaaagcatcac
agagcagatgaaaacatggaagtacaaatcccattaaatggaagaattaacctgcacatg
ttggagaagaaaccaatggagatttccaacatatga

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