Cygnus atratus (black swan): 118251437
Help
Entry
118251437 CDS
T09349
Symbol
UTP15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118251437 (UTP15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cata03009
]
118251437 (UTP15)
Ribosome biogenesis [BR:
cata03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118251437 (UTP15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WD40_RFWD3
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_ACSF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_Vps41
PAC11
Beta-prop_VPS8
DSE1_N
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR41
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_EIPR1
KNTC1_N
BBS2_Mid
WDR54
TRM82_WD
Beta-prop_LRRK2
Beta-prop_At4g14310
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
118251437
NCBI-ProteinID:
XP_035409423
LinkDB
All DBs
Position
Z:complement(26925402..26935227)
Genome browser
AA seq
520 aa
AA seq
DB search
MASYKPVVVPAVPKLGEKVTQDTLYWRGYKTPVQIKEFGAVSKIDFSPVPPYNYAVTASS
RIHIYGRYSQEPIKTFSRFKDAAYCATYRDDGKLLVAGSEEGSIRLFDISGRAPLRQFDG
HTKAVHVVGFLSDKYRIFSGGDDYSSNLWDIPSAAEIVTYTEHTDYVRCGCASKLNGDVF
ITGSYDHTVKVFDARTKSSVMTIEHGHPVESVLLFPSGGLLVSAGGRYVKVWDVLKGGQL
LVSLKNHHKTVTCLCLNSSGQRLLSGSLDRHVKIYSTTSYKVVHSFNYATSILSLALSPE
DETIVVGMTNGVLNVKHRKPEESKEKSQKKRQPAYRTYVKGRNYMPKQEDFFVSKPGKCV
LRKYDKLLKGFQSSKALDAVLEPHIRLYTPEVTVAVMQELNRRGTLRSALAGRDEKQMSL
LLTFVTRRVIEPRFTPILVTVADMITDIYQPVLGQSAVVDKQFLRLQEAIGREIDYQEEL
LEVLGMMDALFATLTKKKATYLEENKSNGLTNTPDQDMCN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacaagccggtggtggtgccggcggtgcccaagctcggggagaaggtgacg
caggacacgttgtactggcgggggtacaagacgcctgttcagataaaggaatttggtgca
gtaagtaaaatcgacttctccccagttcctccatataactatgctgttacagcctcctca
aggatccatatttatggtcgttattctcaggaacctatcaaaacgttttctcgcttcaaa
gatgctgcctattgtgccacatacagggatgatggcaaactgcttgttgctggcagcgag
gaaggtagcattcgtctctttgatattagtggaagagcacccctgaggcaatttgatggt
catactaaagctgttcatgtggtgggcttcctctctgataaataccgaatattttctggt
ggtgatgattattcatcaaatttgtgggatattccaagtgctgcagaaattgtgacatac
actgaacatacagactatgtgagatgtggctgtgcaagtaaattgaatggagatgtcttt
ataacaggttcctatgatcacactgtgaaagtgtttgatgcaagaacaaaaagtagtgtc
atgacaatagaacatggccacccagtggagagtgtgcttcttttcccttcaggaggactg
ttagtgtctgcaggaggacgttatgtcaaagtctgggatgtattgaaaggcggacaatta
ctagtttcacttaaaaatcatcataaaactgtaacttgtttatgcctgaacagctctgga
caaaggttattatcaggatccctggacaggcacgtgaagatttacagtacgacttcctac
aaagtagtccacagctttaactatgcaacatctatcctcagtcttgcattgtcacctgaa
gatgaaactatagttgtaggcatgaccaatggggtgctaaatgttaaacacagaaaacct
gaagaaagcaaagaaaagtctcaaaagaagagacaaccagcatatagaacctatgtgaaa
ggaagaaattacatgccaaaacaggaggatttctttgtcagtaagcctggaaagtgtgtt
ttgaggaaatacgacaagctactgaagggctttcagtcatccaaggcccttgatgcagta
ttggagccacacatcaggctttatacccctgaagttacggttgcagttatgcaggaacta
aaccgcagaggaacactaaggagcgcacttgcaggccgagacgagaagcaaatgagtctc
ctccttacctttgtgacaaggcgtgtaattgaacctagatttactccaatactggtaact
gtcgcagatatgatcactgatatttatcagcctgtgcttggacagtcagcagttgtagat
aaacaattcttgaggcttcaggaagccataggaagagagattgactatcaagaggaacta
ctagaagttttaggaatgatggatgcactatttgctactttgactaagaaaaaagctacg
tatctagaagagaacaaaagtaatggtcttacaaatactccggatcaagatatgtgtaac
taa
DBGET
integrated database retrieval system
