Cygnus atratus (black swan): 118251582
Help
Entry
118251582 CDS
T09349
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118251582 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118251582 (MYO5A)
04131 Membrane trafficking [BR:
cata04131
]
118251582 (MYO5A)
03029 Mitochondrial biogenesis [BR:
cata03029
]
118251582 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cata04812
]
118251582 (MYO5A)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118251582 (MYO5A)
mRNA cycle factors
P-body specific factors
118251582 (MYO5A)
Membrane trafficking [BR:
cata04131
]
Others
Actin-binding proteins
Myosins
118251582 (MYO5A)
Mitochondrial biogenesis [BR:
cata03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118251582 (MYO5A)
Cytoskeleton proteins [BR:
cata04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118251582 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
HTH_17
Myosin_N
AAA_22
AAA_16
NPHP3_N
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
118251582
NCBI-ProteinID:
XP_035409716
LinkDB
All DBs
Position
11:complement(2180601..2284368)
Genome browser
AA seq
1878 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNADYFHYTKQGGSPVIDGVD
DAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFAYRDSDSCTIPPKHDPLTIF
CDLMGVEYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVN
KALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEK
PRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKFKLLPELFQDEEKVLS
PTSATPSGRVPLSRTTVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQRDVL
GDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW
LMRKKYVRMRKAAITIQRYVRGYQARCYAKFLRRTRAAITIQKFHRMYVVRKRYQCMRDA
TIALQALLRGYMARNKYQMMLQEHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMM
AKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKLNSLEITYSTE
TERLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQSEKKTIEEWADKYKHET
EQLVSELKDQNTLLKTEKEELNRRIHDQAKEITEAMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKDEMNLMASIPKPGHKRTDSTHSSNESEYTFSSEITEAEDLPLRM
EQEPSEKKAPLDMSLFLKLQKRVTELEQEKQSLQDELDRKEEQALRAKAKEEERPPIRGA
ELEYESLKRQELESENKKLKNELNELQKALTETRSPEVTAPGAPAYRVLLDQLTSVSEEL
EVRKEEVLILRSQLVSQKEAIQPKDTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRQS
PQDYHMLNEDGELWLVYEGLKQANRLLESQLQSQKKSHENELESLRGEIQSLKEENNRQQ
QLLAQNLQLPPEARIEASLQHEITRLTNENLFYEELYADDPKKYQSYRISLYKRMIDLME
QLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGML
EYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTI
NGIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQNEHCLTNFDLAE
YRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEG
TYTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMFYIIGAVTLNNLLLRKDMCSWSKGM
QIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNALTTA
QIVKVLNLYTPVNEFEERVLVSFIRTIQLRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLA
LETIQIPASLGLGFISRV
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgagctgtacacgaagtatgccagggtttggatccctgatccagaggaa
gtctggaagtcagcagaacttctcaaagattataaacctggagataaagttcttcagctt
cgacttgaagagggcaaggacctagaatattgccttgatccgaagaccaaggaactcccg
cccttgcgaaaccctgacatacttgttggtgaaaatgacctcacagcactcagttatctc
catgaacctgctgttttacacaacctcaaagttcgatttatagactctaaactcatttat
acctattgtggtatcgtcttagtggccataaatccgtatgaacaactgcctatctatggc
gaagatatcatcaatgcgtacagcggccaaaatatgggggatatggatccacacatcttt
gcagtggcagaagaggcatataagcagatggccagagatgagcgaaatcagtcaatcatt
gtaagtggagaatctggggcagggaagacagtctctgccaagtatgccatgaggtacttc
gccacggtcagtggatctgccagtgaagccaatgttgaggagaaagtcttggcttccaac
cccataatggagtctatcggaaatgccaaaacaacaaggaatgacaacagtagtcgcttt
gggaaatacattgaaattggttttgataagagatatcgaatcattggtgctaacatgaga
acttacctcctggagaagtcaagagtggtatttcaggcagaagaggagagaaattaccac
atcttttaccaactatgtgcctctgcagcattacctgaatttaaaactctacgcttaggg
aatgcagattactttcactatacgaagcaaggtggaagccctgtgattgatggcgttgat
gatgctaaggaaatggtaaacaccaggcaggcctgcactttgctagggattagcgattcc
taccagatgggaatttttcgaatcctcgctggcatccttcacttgggcaatgtggagttt
gcatatcgggattctgacagctgcaccattcctcccaaacatgatcccctcaccatcttc
tgtgacctcatgggtgtagagtatgaagagatggcccactggctttgccacaggaagctt
gcaactgccactgaaacctacatcaagccaatttctaaactccatgccatcaatgccaga
gatgcacttgccaaacatatctatgctaatctctttaactggattgtagatcatgtgaac
aaagcccttcattctactgtaaaacagcattctttcattggagtgttggacatttatgga
tttgagacgtttgaaatcaacagctttgaacagttctgtatcaactatgccaatgaaaaa
ctgcagcaacagttcaatatgcatgtctttaagttggaacaagaagaatatatgaaggaa
caaataccatggaccttgattgatttctatgacaatcagccttgcatcaacctcatagag
gcaaaaatgggaattctggatctgttagatgaggagtgcaagatgccaaaaggctcggat
gacacttgggcccaaaaactatacaatactcatttgaataaatgtgccctctttgaaaaa
ccacgtttatcaaataaggcttttatcatcaagcactttgctgacaaggtggaatatcaa
tgtgaaggctttctggagaagaataaagacacagtttatgaagaacaaattaaggtcctc
aaatcaagtaagtttaagctgctaccagagttattccaggatgaggagaaggtgctcagt
cccacgtcagcaaccccttcaggccgtgtgccgttgtctcgaactactgtaaaaccagcc
aaggccaggccagggcaaaccagcaaggaacataagaaaactgtggggcatcagttccga
aactctcttcatctgctgatggaaaccctgaacgctacaactccacactacgtgcgctgt
attaaacctaacgacttcaagtttccgttcacatttgatgaaaagcgggcagtgcagcag
ctgagagcttgtggtgtcctggagaccatccgaatcagtgcagctggctttccctcaagg
tggacgtaccaggagttcttcagccgttaccgtgttctgatgaagcagagagatgtcctt
ggtgatcgaaagcagacatgtaaaaatgtcctggagaagctaattctggacaaggataag
taccagtttggtaagacaaaaatattttttcgggctggtcaagtagcatacctggaaaaa
ataagggcagataagttgagagctgcctgtatccgcatccaaaagacaatccgaggctgg
ctgatgagaaagaagtacgtgcgtatgaggaaggctgccatcaccattcagagatatgtc
agagggtatcaagcacgatgctatgccaagttcctacggagaacacgggctgccatcact
attcagaagttccaccgtatgtatgtggtccggaaaagataccaatgcatgcgagatgct
actattgctcttcaggctctcttaagaggttacatggccaggaacaagtaccaaatgatg
cttcaagagcacaagtctattattattcagaaacatgtaagaggctggctggctcgtgtg
cactaccataggaccttgaaggcaattgtttacttgcaatgctgttaccggcgcatgatg
gcgaagagggagctaaagaaactgaagatagaagctcggtccgtagaacgctacaagaag
cttcacattggcttggagaacaagatcatgcagctgcagcgaaaaattgatgagcagaac
aaagagtacaaatctctgctggagaaactgaacagcctggagattacgtacagtacggag
acagagagacttcggagtgatgtggagaggcttcggatgagcgaggaagaggctaagaat
gcaaccaaccgtgttctcagccttcaggaggagattgctaagctccggaaggagctgcac
cagactcagtctgagaagaagaccattgaggaatgggcagacaaatacaaacatgaaact
gagcagctggtatcagaactgaaagatcagaacacattactgaaaacagaaaaggaggag
ctgaaccgccgcatccacgaccaggcaaaagagataacagaggcaatggaaaagaagcta
gtggaggaaacgaaacagctggagctagatctgaatgatgaaaggttacggtatcagaac
ctgctaaatgagttcagccgcttagaggagcggtatgatgatctcaaggatgaaatgaac
ttaatggcgagcatccccaagcctggacacaaaagaacggattcaactcacagtagcaat
gaatctgaatatacttttagctctgagatcacagaagcagaagacttaccactgaggatg
gagcaggaaccaagtgagaaaaaggcaccattggacatgtctctgttcctcaagctgcag
aaacgggttacagagctggagcaagaaaagcaatcccttcaggatgaactggacagaaag
gaagaacaggctcttcgtgctaaagctaaggaggaggaaaggcctccaataagaggtgcg
gagttggagtatgagtcactcaagcgtcaagaacttgaatctgagaacaaaaaactgaag
aatgagttgaatgagctgcagaaggccctcacagaaacgcgatctccagaggtaactgct
cctggtgccccagcatatagagtcctcctggatcagctaacttcagtaagtgaagaactt
gaagtacgcaaggaagaagtcctcatcctgaggtctcagctggtcagccagaaagaggct
attcaacccaaggatactatgacggattctactatcctcttggaagatgtacagaagatg
aaagacaaaggagaaatagcacaggcatatattggattgaaggaaacaaacaggcaatct
ccccaggactatcatatgctgaatgaggacggagaactttggctggtttatgaagggtta
aaacaagccaacaggctgctggagtctcagcttcagtcgcagaagaagagccacgagaac
gaactggaatcactgcgaggagagatccaaagtctgaaagaagaaaacaatcgccagcag
cagctcttggcgcagaatcttcagctgcccccagaggcccggattgaagccagcttgcag
catgagatcacccggctgacaaacgaaaacttgttttatgaggagttgtatgcagatgat
cccaagaagtatcaatcgtaccggatttcactttacaaacggatgattgatttaatggag
caacttgaaaagcaagacaaaactgttcgaaagttaaagaaacagttgaaagtatttgct
aagaagatcggtgaacttgaagtggggcagatggagaacatatcacctggacaaatcatt
gacgaacctattcgtccagtcaacattccgcggaaagaaaaggacttccaggggatgtta
gaatataagaaggaagatgaacaaaaactggtcaagaatcttattttagagctgaaacca
cgtggggtagctgtcaacctgattccaggactacctgcatatattttgttcatgtgtgta
cgccatgcagattaccttaatgatgaccaaaaagtgcggtccttgttgacttccactatc
aatggcatcaaaaaagtgttgaagaaaagaggtgatgacttcgaaacagtgtcattctgg
ctatccaacacctgccgatttttgcactgtttgaaacaatatagtggagaggaggggttt
atgaagcataatacacctcgtcagaatgagcactgcctcactaattttgacttagctgaa
tatagacaagtactgagtgacttggctattcagatctatcaacaacttgtccgagtgttg
gaaaacattctgcaaccaatgattgtttcaggaatgctggagcatgagactatccaaggt
gtctcaggggtgaaaccaacagggctgcggaagagaacatccagcattgctgatgaagga
acctacactttggactccattattcggcagctgaattctttccattcagtgatgtgtcag
catggaatggatccagagctcatcaaacaggttgtcaagcagatgttctacatcatcggg
gctgtaacacttaataatcttcttctgcgcaaggacatgtgctcatggagcaaaggaatg
cagataagatacaacgtgagtcaacttgaagaatggctacgtgataaaaatttgatgaat
agcggggctaaagaaacactggagcccctcattcaggctgcacagttgttgcaagtaaaa
aagaaaacagatgaagatgcagaagccatttgttcaatgtgcaatgcattgactactgcc
cagattgtaaaagtactgaatttgtatactccagttaatgaatttgaagagagagtcttg
gtatcatttatccgtacaatacagctgcgtctgcgagacaggaaggactctcctcaattg
ctcatggatgctaaacacatctttcctgttacttttccatttaatccatcctctctggcg
ttagaaaccatccagatcccagccagcttagggttgggcttcatatcacgtgtctga
DBGET
integrated database retrieval system
