KEGG   Cygnus atratus (black swan): 118251613
Entry
118251613         CDS       T09349                                 
Symbol
SKIC8
Name
(RefSeq) SKI8 subunit of superkiller complex protein
  KO
K12602  WD repeat-containing protein 61
Organism
cata  Cygnus atratus (black swan)
Pathway
cata03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cata00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    118251613 (SKIC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cata03019]
    118251613 (SKIC8)
Messenger RNA biogenesis [BR:cata03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     118251613 (SKIC8)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_MABP1-WDR62_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_VPS8 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_WDR41 Beta-prop_DCAF4 Tricorn_2nd PROPPIN Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_IFT140_1st Cytochrom_D1 NBCH_WD40 Beta-prop_HPS5 Ge1_WD40 Beta-prop_WDR75_2nd WD40_like Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 WDR54 WD_LRWD1 VPS8_N Beta-prop_IFT122_2nd DUF2415 Beta-prop_pof12 Vgb_lyase
Other DBs
NCBI-GeneID: 118251613
NCBI-ProteinID: XP_035409799
LinkDB
Position
11:complement(7871903..7879956)
AA seq 305 aa
MTTQYGILFKQEQAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTL
EGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQVKSIDAGPVDAWSLAFSPDSQY
LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
CPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHI
YDCPV
NT seq 918 nt   +upstreamnt  +downstreamnt
atgaccacgcagtacggtattctcttcaagcaagagcaagctcacgatgatgccatctgg
tcagttgcctggggaaagaacaaaaaggatggttctgaaacagtgatctctggttctttg
gacgatctagtgaaggtctggaagtggaatgatgaaaaattggatctacagtggacgtta
gagggtcaccaactaggtgtggtatctgtggatatcagccacacgggttccattgcggca
tccagctccctagatgcccatattcgcctttgggatttagaaactggcaaacaggtcaag
tcaatagatgctggtcctgttgatgcttggtccctggctttttcacctgattcccagtac
cttgcaacaggaagtcatgtgggaaaagtaaatatttttggtgttgaaactggaaaaaaa
gaatattctttggataccagaggaaagttcatccttagcattgcatatagtccagatggg
aaatacttagccagtggagcgatagatggcattatcaatatttttgatattgcaactgga
aaacttctgcacacgctagaaggtcatgcgatgcctattcgttcactgacattttctcca
gattctcagttacttgtaactgcttcagatgatggctatatcaaaatctacgatgtacag
catgcaaacttggctggcacattaagtggtcatggatcctgggtattaaatgtagcattt
tgtcctgatgatacccattttgtttccagttcatctgataaaagtgtaaaagtttgggat
gctggaacaagaacctgtgttcacactttctttgaccaccaagatcaggtttggggagtg
aaatacaatggaagtgggtccaaaattgtatctgttggagatgaccaagaaatccatatc
tacgattgtcctgtttaa

DBGET integrated database retrieval system