Cygnus atratus (black swan): 118251635
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Entry
118251635 CDS
T09349
Symbol
RNF111
Name
(RefSeq) E3 ubiquitin-protein ligase Arkadia isoform X1
KO
K10635
E3 ubiquitin-protein ligase Arkadia [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118251635 (RNF111)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118251635 (RNF111)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118251635 (RNF111)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF111_N
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
118251635
NCBI-ProteinID:
XP_035409868
LinkDB
All DBs
Position
11:4372297..4425510
Genome browser
AA seq
1023 aa
AA seq
DB search
MEAAADLAARRRRGAAHLAPGPPRERPFLKLSMSKWTPECNIVYTLKADMKSEVPSDAPK
RQESLKGILLNPEPIGAAKSFPAEVEMIASKVGNEFSHLCGDSQKQREMNGNRTDPDKSI
VVRKKRKSQQAGPSYTQNCPDKENQGILGLRQHLETQSEDNDSSFSDCISSPSSSLHFGD
SDTVTSEEEKDAPVRHPQAVLNTTSRTHSARSQKWPRTEADSVPGLLMKRPCFHSSSLRR
LPYRKRFVKTSSSQRTQNQKERILMQRKKREVLARRKYALLPSSSSSSENDLSSESSSSS
STEGEEDLFVSTGENHQNNTAVPSGSIDEDVVVIEASSTPQVTANEEINVTSTDSEVEIV
TVGESYRSRSTLGHSRSHWGQSSSSHAARPQEQRNRSRISTVIQPLRQNAAEVVDLTVDE
DEPTVVPTTSARVEPQVVSSASSNSSSTSTSEQASDAAPNVSNSQPSAAPETTSSLPNSS
IAGSSAGDDTRRTASNTTLETGPPAMPRLPSCCPQHSPCGGSSQNHHALGHPHTSCFQQH
GHHFHHHHHHNPHPAVPLSPSFSDSSCPVERPPPVPAPCGASSSSGTSYHDQQALPVDLS
SNGIRSHGSGAFHGTSAFDPCCPGSSSRTAIYGHQAGAGPSQSITIDGYGSSMVAQPQPQ
PPPQASLSSCRHYMHSPYASLTRPLHHQASACPHSHGNPPPQPQPPPQVDYVIPHPVHPF
HPSISSHASSHPVPPPPPTHPLASAAAPIPQHLPAAHQPISHHIPATAPPAQRLHPHEVI
QRMEVQRRRMMQHPTRAHERPPPHPHRMHPNYGHGHHIHVPQTMSSHPRQAPERSAWELG
IEAGVTAATYPPGPLHPHLAHYHAPPRLHHLQIGALPLMVPDMAGYPHIRYISSGLDGTS
FRGPFRGNFEELIHLEERLGNVNRGATQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGE
EGTEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQLP
SES
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcggccgacctggcggcgcggcgcaggcgcggtgcggctcacctggccccg
ggacctccccgcgagaggcctttcttaaaactttccatgtctaaatggactcctgaatgt
aatatagtttatactctaaaagcggatatgaagagtgaagttccttctgatgcgccaaag
agacaggagagtctgaaggggatcctcttgaaccctgagcctattggggcagccaaaagc
ttccctgcagaagttgagatgattgccagtaaagtaggaaatgagttctctcacttatgt
ggtgattctcaaaagcagagggaaatgaatggcaaccgtacagacccagacaaaagtatt
gtggtgcgaaaaaaacgcaagagccagcaggctggtccttcatatactcaaaattgtcct
gataaagaaaaccaaggcattttaggattaagacagcatctagaaacacagagtgaagac
aatgactcttcttttagtgactgtatctcttcaccttcatccagcctacattttggagac
tctgacacagtaacgtctgaagaagaaaaagatgctcctgtaagacaccctcaggcagtg
ttgaatactacaagtagaactcatagtgcaaggtcacaaaagtggcctcggactgaggca
gactctgtacctgggttattaatgaaaaggccctgttttcacagcagttctttgagaaga
cttccatatagaaagagatttgtgaaaaccagttcctcacagcggacacagaaccaaaag
gaacgaattttaatgcagaggaaaaaacgggaagtgttagctcgaagaaagtatgcttta
ctacccagctctagcagttcaagtgagaatgatctcagtagtgaatcttcttcgagttca
tctactgaaggggaggaagacttatttgtgtcaactggtgaaaaccaccagaacaataca
gctgttccttcagggagtattgatgaagatgttgttgtgattgaagcatcctccactccc
caggtcactgctaatgaagaaataaatgttacctcaacagatagtgaagtggagatcgtc
acagttggtgagagctacaggtctcgttcaacgctcgggcactcaagatcacactgggga
caaagctctagttctcatgctgcacggcctcaagagcagcggaaccgcagcaggatttcc
acagtcatacagccactcaggcagaacgcagcagaagtcgtggaccttacggtggatgag
gatgagccgacagttgtgccaaccacatcagctagggtggagccccaggttgtgagttct
gcttccagtaacagttctagtacgtctacctcagagcaggcctctgatgcagctccaaac
gtctccaacagccagccctctgcagcaccagagacaacttctagtcttccgaatagcagc
attgctggttcttcagctggagatgatacaagaagaactgcatctaatacgacactggaa
actggccctccggccatgccacggttaccatcttgctgccctcagcattctccatgtgga
ggatcttcacagaatcatcatgcattggggcatccgcatacaagctgctttcagcagcat
ggccaccactttcaccaccaccaccaccacaaccctcacccagctgttccactgtctcct
tcattcagtgactccagctgccctgttgaaaggcctcctccagtgcctgccccttgtgga
gcaagcagcagttctggcaccagttaccatgaccagcaggcattgccagtagacttaagc
agcaatggcataagaagtcatggaagtggtgcttttcatggaacgtctgcttttgacccc
tgctgtcctggttcttcatctcgaactgcaatctatgggcatcaggctggtgctggccca
agccaatcaataacgatagatggatatggatcaagtatggttgcacagccccagccccaa
cctcctcctcaggcatcgctttcttcctgccggcattatatgcactctccctatgcttct
ttgaccagacctcttcaccatcaagcttctgcatgtccccactctcatggaaatcctcct
ccacagccacaacctccgcctcaagtagattatgttattcctcatccagtgcatcccttc
catccttcaatctcctctcatgcatcttctcatcctgttccacctccaccaccaactcat
cctttagccagtgcagctgctccgattccacagcatcttcccgcagcacatcagcctatc
tcccatcacatccctgcaacagcacctccagcacagaggctacatcctcatgaagtcatc
cagaggatggaggtccagagaagaagaatgatgcaacacccaacacgtgctcatgagagg
cctcctccacatcctcacagaatgcacccaaattacggtcatgggcatcacattcacgtg
cctcagacaatgtcttcccatcctcgacaagctccagagaggtctgcctgggaactggga
attgaagctggtgtgactgcagctacttaccctccagggcccttgcatcctcacttggcc
cactaccacgcacctcctcgacttcatcatttgcaaataggggctcttcccctaatggta
ccagacatggcgggctatcctcacatccgttacatttcatcgggattggatggaacatca
ttcagaggccctttcaggggcaattttgaggagctgattcacttggaggaacgattaggc
aatgtaaatcgtggagcaacacagggaactatagaaagatgcacatatccccataaatac
aaaaaggtaacaactgattggttctcacagaggaaactgcactgcaagcaagatggggag
gaaggaacagaagaagacacagaggaaaagtgtaccatctgcttatctatattagaggaa
ggtgaagatgtcaggcgacttccatgtatgcaccttttccaccaagtatgtgtagatcag
tggctgattactaacaagaagtgccccatttgcagagtggacattgaggctcaactgcca
agtgaaagttga
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