Cygnus atratus (black swan): 118251651
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Entry
118251651 CDS
T09349
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118251651 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cata03310
]
118251651 (RORA)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118251651 (RORA)
Nuclear receptors [BR:
cata03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118251651 (RORA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118251651
NCBI-ProteinID:
XP_035409901
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Position
11:complement(6390110..6767638)
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AA seq
526 aa
AA seq
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MESAPAAPDPAASEPGSSVSEAAAGARDTPASLEPARKSDAPAAGRRQSYSTSGSGSRGI
SVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLI
DRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPG
EAEPLTPTYNITTNGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDIN
GIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQ
ITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVLLK
AGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHLTE
DEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTL
RALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgctccggcagcccccgatccagcagccagcgagccgggcagcagcgtctcc
gaggcggccgccggcgccagggacaccccggcgagcctggagccggcccggaaaagcgat
gcgccggccgccggccgcaggcagagctactccaccagcggtagcggcagcagaggtatt
tctgtaacaaagaagactcatacatctcaaattgaaattattccatgcaagatctgtgga
gacaaatcatcaggaatccattatggtgtcattacatgtgaaggctgcaagggctttttc
agaaggagtcagcaaagcaatgctacgtactcctgtcctcgtcagaagaactgtttgatt
gaccgaaccagtagaaaccgctgccaacactgtagattacagaaatgccttgctgtgggg
atgtctcgagatgctgtaaagtttggtcgaatgtcaaaaaagcagagggacagcctgtat
gcggaggtacagaaacatcgaatgcagcagcagcagcgagatcatcagcagcaaccagga
gaggcagaaccactaacaccaacatacaatatcaccaccaacgggttaacagagctacat
gatgacctcagtaattacattgatgggcatacccctgaaggtagcaaagcagactctgca
gttagcagcttctacttagacatacaaccttctccagatcagtcgggtcttgatattaat
ggaatcaaaccagaaccaatatgtgactacacaccagcatcgggcttcttcccttattgt
tcttttacaaatggggagacctctccaactgtgtccatggcagaattagaacatcttgca
cagaatatttccaagtctcatatggaaacttgccagtacttgagagaagagctacagcag
ataacatggcagacttttcttcaggaagaaattgagaactatcagaacaagcaaagggag
gtaatgtggcagttatgcgcagtcaaaataacagaagctatacagtatgtagtggaattt
gccaaacgcattgatggctttatggaactgtgtcaaaatgatcaaattgtgcttttaaaa
gcagggtctttagaggttgtgttcatcagaatgtgccgtgcctttgactcccagaacaac
acagtctactttgatggcaagtatgctagcccagaggttttcaagtccttagggtgtgaa
gacttcattagttttgtgtttgaatttggaaaaagtttgtgttctatgcacctcacagaa
gatgagatagctttgttttctgcatttgttttaatgtcagcagatcgttcatggcttcag
gagaaggtaaaaattgaaaaactccaacagaagatccagctagcacttcagcatgtccta
cagaagaaccaccgagaagatggaattctaacaaagttaatatgcaaagtgtctacttta
agagcactgtgtggacgacatacagaaaagcttatggcatttaaagcaatatacccagac
attgtacgacttcattttcctccactttacaaggagttgttcacttcagaatttgagcca
gcgatgcaaattgatgggtaa
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