Cygnus atratus (black swan): 118251679
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Entry
118251679 CDS
T09349
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118251679 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118251679 (SIN3A)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
118251679 (SIN3A)
REST complex
118251679 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118251679 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
118251679
NCBI-ProteinID:
XP_035409981
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All DBs
Position
11:9076478..9106760
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AA seq
1274 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRIASSTEAFQHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSGHHHSTPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQR
LKVEDALSYLDQVKLQFGTQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPQHQSQPSAQSTPTPAQ
PAPQPPPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRP
NQNGCQIRRHSGTGTTPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSL
AYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLH
QILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSESPAIQLRLKEPMDIDVEDYY
PAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENSNGATGGLLASQSSRTLLEATYQRKAEQLMSEENCFKLMFIQSRGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSH
ERVSKRLHQRFQAWVDKWTKEHVTREMAAETSKWLMGEGLEGLVPCTTSCDTETLHFVSI
NKYRVKYGTIFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgattggatgagcaggagtcacccgtgtatgcgtcgcagcagagacgtatc
gccagcagcaccgaggctttccagcaccagcaccgcgtgctcgccccggccccgccggtg
tatgaggctgtttcggagaccatgcagtctgccacggggatccagtactcggtaaccccc
agctaccaggtgtcggccgtgccgcagagctcgggcagccacgggccggccatcgcggcg
gtgcacagcgggcaccaccacagcacgccggtgcagccgcacggcagccaggtggtgcaa
agccacactcacccgacgccgccggccgtgcccgtgcaggggcagcagcagttccagagg
ctcaaggtggaggatgcattgtcttaccttgaccaggtgaagctgcagtttggtacccag
ccacaggtctacaatgacttcttggatattatgaaggaattcaaatctcaaagcattgac
actccgggagtgatcagccgtgtatcacagctcttcaagggccacccagacttgatcatg
ggcttcaacaccttcttgccacccggttacaagatcgaggtgcagacaaatgatatggtg
aacgtgacgacaccagggcaggttcaccagatccccactcacggcttgcagccccagccg
cagccccagccgcagcatcagtcacagccttcagcgcaatcaaccccaacaccagcacag
cccgcgccgcagccaccgcctgccaaaatcagtaagccatcccaactgcaggcgcatacc
cctgccagccagcagactcccccgattccaccatatgcatcgccacgctcgccgccggtc
caacctcatacccctgtgacaatctctctgggaaccacaccatccctgcagaacaatcag
cctgttgagtttaatcacgccatcaactatgtcaacaagatcaagaatcggttccaggga
caaccggacatctacaaagccttcctggagatcctccacacctaccagaaggagcagcgg
aacgccaaggaggcaggaggcaactacacgcctgctctgacggagcaggaggtgtacgcg
caggtggctcgcctcttcaaaaaccaggaggatctgctctcagagttcgggcagttcctg
cctgatgccaacagctctgtgctgttaagtaagacaactgcagagaaagtggaatcggtg
agaaacgatcacggtggcaccgtgaagaagccccagctcaacaacaagcagcaaagaccc
aaccagaacggctgtcagatccgacggcactcaggaactggaacaacccctccggtgaag
aagaagccgaagctgcttggtttaaaagaccagtctttggcagaagccagcaagcatggc
gtcgggacagaatctctgttctttgagaaggtccgcaaagctctgcgcagcacagaagca
tacgaaaacttcctccgctgcctggtgattttcaaccaggaggtgatctcccgggcagag
cttgtgcagctcgtgtctccctttctggggaaattcccagagttgttcacttggtttaaa
aactttttggggtataaagagtctgttcacatggagacgtatccgaaggaacgggccact
gaggggattgccatggagatagactatgcctcctgcaaaagactgggctccagctaccgc
gccttgcccaagagctaccagcaacccaagtgcacggggcggacgccgctgtgtaaagag
gttttgaacgacacctgggtctccttcccttcctggtctgaagactccacgtttgtgagc
tccaagaagacacaatacgaagagcacatctacaggtgtgaggatgagcgctttgagctg
gatgttgtcttggagaccaacctggcaacaatccgcgtccttgaggcaatccagaagaaa
ctctcacgcttgtctgccgaggagcaggccaaattccgactggacaacaccctgggcggc
acctcggaggtgatccaccgcaaggctctccagaggatatatgctgacaaagcagccgac
atcatcgatgggcttcggaagaacccctctgttgctgttcccatcgtgctgaaaaggtta
aagatgaaagaggaagagtggcgagaagcccagcgagggtttaataaagtgtggcgggag
cagaatgagaaatattacctgaaatccttggaccaccagggcatcaacttcaagcagaac
gataccaaggtcctgaggtcaaagagtctcctcaatgagattgaaagcatctatgatgag
aggcaagagcaggcttcggaagacaacgccggcgtacccacaggcccacacctatcgtta
gcctacgaagacaagcagatcctggaagatgccgcctcgctcatcatccaccacgtgaag
cggcagacaggaatccagaaagaggacaagtacaaaatcaagcagattatgtaccacttc
attccagacctgctgtttgctcagcgaggtgaactctctgacgtggaagaggaggaagag
gaagaaatggacgtggacgaagctactggagctgcgaaaaagcacaatggtgttgggggc
agccctcccaaaaccaagctgatgttcaacaacacaacggcccagaagctgcggggcatg
gatgaggtctacaacctcttctatgtgaacagcaactggtacattttcatgcggctgcat
cagatcctgtgcttgcggctgctgaggatctgcacccaggccgagcggcagatcgaagag
gagacacgggaaagggagtgggagagggaagtgctgggcataaagcgagacaagagcgag
agccctgccatccagctgcggctgaaggagcccatggacatcgacgtggaggattactac
ccggccttcctggacatggtgcgcaatctgctggacgggaacatggactcgtcgcagtac
gaggactccctgcgcgagatgttcaccattcacgcctacatcgccttcaccatggacaag
ctgattcagagcatcgttcgacagctccagcacatagtgagcgacgagatctgcgtgcag
gtcacggacctctacctgtcagagaacagcaacggagccacgggaggccttctcgcctcg
cagtcctctcgtacccttctggaggccacctaccagcgcaaagctgagcagctcatgtcg
gaggagaactgcttcaagctgatgttcattcagagcagaggccaagttcagttaaccatt
gagctgctggacacagaagaggagaactcggatgacccagtagaagcagagcgctggtcg
gactacgttgagcggtacgtcaactccgattctacctcccccgagctccgggagcacctg
gcccagaaacccgtcttcctgccgaggaatctgaggcggatccgtaagtgtcagcgtggt
cgggagcagcaggagaaggaagggaaggagggaaacagtaagaagtccatggagaacgtg
gagagcttggacaagctggagtgtaaattcaaactgaactcctataagatggtgtacgtg
atcaaatcggaggattacatgtacaggaggaccgctctgctgcgagctcagcagtcccac
gaacgagtgagcaagcggctgcaccagcggttccaggcctgggtggacaaatggaccaag
gagcacgtcacccgcgagatggcagccgagacaagcaagtggctcatgggcgaagggttg
gagggcttggtgccctgcaccacctcctgtgacacagagaccctgcactttgtgagcatt
aacaagtaccgtgtcaaatacggcacgatattcaagacaccgtaa
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