Cygnus atratus (black swan): 118251719
Help
Entry
118251719 CDS
T09349
Symbol
MYO5C
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc
KO
K10357
myosin V
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118251719 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118251719 (MYO5C)
04131 Membrane trafficking [BR:
cata04131
]
118251719 (MYO5C)
03029 Mitochondrial biogenesis [BR:
cata03029
]
118251719 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cata04812
]
118251719 (MYO5C)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118251719 (MYO5C)
mRNA cycle factors
P-body specific factors
118251719 (MYO5C)
Membrane trafficking [BR:
cata04131
]
Others
Actin-binding proteins
Myosins
118251719 (MYO5C)
Mitochondrial biogenesis [BR:
cata03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118251719 (MYO5C)
Cytoskeleton proteins [BR:
cata04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118251719 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
118251719
NCBI-ProteinID:
XP_035410142
EnsemblRapid:
ENSACYG00000002849
LinkDB
All DBs
Position
11:complement(2145920..2179157)
Genome browser
AA seq
1750 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDRFLHVQLEDGTELNYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYTMRYFAT
VSKSTSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQSYRIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEFQHLKLGSAEKFNYTRMGGNTVIEGVDDR
ANMVETQKTFALLGLKEDFQMDIFKTLAAILHLGNVEITAVGDERSSINPEDSHLNIFCD
LLDLNFDKMTQWLCHRKIITTSETVIKPMTKPQAVNARDALAKKIYSHLFDFIVERINQA
LQFTGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQLQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYEVLMEILKESKFRLCANFFQDNPVSISPF
SSTINVKSARPVLKPPNKQLRMTVGSKFRSSLSLLMETLNATTPHYVRCIKPNDEKQPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSLNDKKQICKIV
LQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDKLRHACIMIQKSVRGWLQRKKFLRIK
QAAVTIQQYFRGQRTVRQAITARALKQTWAAIIIQKYCRGYLVRKLCQLIHVAAVTIQAF
TRGFLARKKYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVSNIQLSYRVQRLQKKIEE
QSRENHGLLERLTNLASTHMNDLDTIQKLELELEKLTAQKRTYEEKGKKYKEDSEQKIFK
LENQNKELREQKETLEIKLQEKTEEMKEKMDGLTKQLFDDIQKEESQRMILEKKIQNQKQ
DYEKEIELLKGEIKVLKEEKSWLQQQVQQEIIIQDGLKIEVGQLTKQAQKIPELQKEIEL
LQTQKLDVEKQAQSQKREMREKMSEVTKQLLESYDFEDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEIYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENMVIPDLKQQVSELENQKLDLENRLQEQTVKLKGKIPLWSAVLXLREMSNQLH
HEPEGDRTLRRTNEAQNEINIKAKERLNVITQEIEGLSNGLKQDEIHDEVKSKIKQETTR
LTVENMDLEEKLDMKDRIIKKLEDQIKTLTKTIEKVNEVHVPTLSKEYIGMMEYKKEDEE
RIVQNLILDLKPRGVVVNMIPGLPAHILFMCVRYADYLNDADMLKSFINVTIDGIKQVVK
ENSEDFEMLSFWLSNTYYFLNCLKQYSGEEEFMKSNTPRQNKNCLKHFDLSEYRQILSDL
AIRIYHQFIVVMENNIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSIL
QQLSYFYSTMCQNGLDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISY
LEEWLKDKNLQSSNAKETLEPLAQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNS
YTPIDDFEKRVAPSFVRKVQAMLNNREDVPQLMLDTKYLFQVTFPFTPSPHALEMIQVPS
SFKLGFLTRV
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacgcagtacaacagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcacaaaaaactacaaagctggagaccgttttctccatgtg
caattagaagatggaactgaacttaattaccctgttgatccagctgctttgccacctcta
cgaaatcccgacatacttgttggtgaaaatgatctcactgcacttagttatctccatgaa
ccagctgttctacacaatcttaaagttcgttttgtggagtctaagcttatctacacctat
agtggaataattttggttgcaataaacccctataagcagttgccaatatatggagatgct
attatccatgcatatagtggacaaaacatgggggacatggatcctcatatatttgctgtg
gcagaagaagcatacaagcaaatggcaagaaataacaagaatcagtctattatagtgagt
ggagaatcaggagctggaaagactgtgtctgcaagatatactatgagatactttgccact
gtgagtaagtctaccagcaatgcacatgtggaggataaagtattggcatccaatccaata
actgaggctgtcggcaatgcaaaaaccacacggaatgacaatagcagtcgatttggaaaa
tacactgaaatcagttttgatcagagctaccgaatcattggagccaacatgagaacatac
ctgcttgagaaatctagagttgtctttcagtcagagaatgagagaaattaccatatattt
tatcagttgtgtgcatctgctatgcaacctgaatttcagcatcttaaattgggaagtgca
gaaaaatttaactacacaagaatgggtggtaatacagttattgaaggagttgatgacaga
gcaaatatggtggagactcagaagacatttgccttactgggtctgaaggaagattttcaa
atggatatttttaaaacactggcagcgatcctacacttaggcaatgtggaaataacagct
gttggagatgaaagatcatccatcaatccggaagacagtcatctcaatatattctgtgac
cttctggatttaaactttgacaaaatgacacagtggttgtgccaccggaagattatcact
acctcagagactgtaataaagccaatgacaaaacctcaagctgttaatgcaagggatgct
ttggcaaagaagatctattctcatttatttgactttattgtggaaagaattaaccaagct
ttgcagttcactggcaaacaacatacttttattggtgttttggacatttacggctttgaa
acgtttgatgtgaacagttttgaacaattttgcatcaattatgccaatgaaaaactacag
ctgcaatttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttttatgacaaccagcctgttattgaccttattgaagctaaa
atgggtattttagaacttttggatgaagagtgcttgttgcctcatggaacagatgaaaac
tggcttcaaaagctatataataattttgtcaacaaaaacgcactctttgaaaagccgagg
atgtcaaacacatctttcatcattcaacactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagggatacagtatatgaagtattgatggaaatcttgaaagag
agcaagtttcgtctgtgtgcaaacttttttcaagacaatccagtgtccatttcacctttc
agttcaactataaacgtcaaatctgcaagacctgttctcaagccacctaacaagcaactc
cggatgactgttggcagtaagtttcggagttctttgtctttgcttatggagacacttaac
gcaaccacccctcattatgtacgatgcataaagccaaatgatgagaagcagccttttgag
tttgactcaaaaagggtggctcagcaactgcgagcatgtggtgttttggaaactattcga
attagtgcacagagctatccatccaggtggacttacattgagtttttcagccgttacagc
attcttatgacacagcaagaactgtctttaaatgataagaagcagatttgcaagattgtt
ttgcagcggctaatccaggatcctaaccagtatcagtttgggagaacaaaaattttcttc
agagcaggacaggttgcttacttagaaaagctacgatcagataaactgagacatgcatgc
atcatgatccaaaagagtgttcgaggctggctgcagcggaagaaattccttcgcataaaa
caagcagctgttacaatacagcagtatttccgtggacagcggactgtacggcaagccata
actgcaagagctctgaagcaaacatgggcagctataattattcagaaatactgccgaggt
tacctggtccgtaaactttgtcagctcatccatgtggctgctgtaacaattcaagctttt
acaagaggatttctagcaagaaaaaaataccggaagatgcttgaagaacacaaagctgtg
atccttcagaaatatgcccgtgcatggcttgccaggcgcagatttcagaatattcggcgg
tttgtatcaaatatccagctttcatacagagttcagcgactgcagaaaaagatagaagaa
cagagtagagaaaatcatggcttgttggaacgattgaccaatctggcttcaactcatatg
aatgacttggatacaattcagaaacttgaattagagcttgaaaagttaactgctcaaaag
agaacatatgaggagaaagggaaaaaatataaagaggacagtgaacagaaaatcttcaaa
cttgaaaatcagaataaagaattacgagaacaaaaagagaccttagaaataaagctccaa
gaaaaaactgaggaaatgaaagagaaaatggatggcctcacgaagcaactcttcgatgat
atacaaaaagaagaaagtcagagaatgatacttgaaaaaaaaatccaaaatcagaaacaa
gattatgaaaaggagatcgaattgctcaagggagaaattaaggttctcaaagaagaaaaa
tcttggctacagcaacaagttcagcaagaaattatcattcaggatggcctgaaaatagaa
gtagggcaacttacaaaacaagcacagaaaatacctgagttgcaaaaggaaattgaactg
ctgcagacacaaaaattggatgttgaaaagcaggcccagtcacagaagcgggaaatgagg
gaaaagatgtcagaagttacaaaacagcttctggaaagttatgattttgaagatgtaaga
agcagactgtctacggaggatttggaacacttaaatgaggatggagaattgtggtttgct
tatgagggcttgaaaaaagctacgagagtattggaaagtcacttccagtctcagaaagaa
atctatgaaaaggagattgaaggtttgaatttcaaagttgaacatcttagccaagatatt
aatcatctacaaaaattatttcgagaggaaaatgacataaatgatggtattcgactcgaa
gttagcaggctaacttcagaaaacatggtgattccagaccttaaacagcaagtttctgaa
cttgaaaatcaaaaattagatcttgaaaaccgtctccaagaacagactgtaaagttgaaa
ggtaaaataccattgtggtcagcagtcttatagctgagagagatgtctaatcagctgcat
catgagccagaaggggacagaacactaaggagaacaaatgaggcgcagaacgaaataaac
ataaaagccaaagagagattgaatgtcataacccaagaaattgaagggctgagcaacggt
ttgaagcaagatgaaatccatgatgaagtaaaaagcaagataaagcaagaaacgactcga
cttactgtggaaaacatggatcttgaagaaaaactagacatgaaagatagaataataaaa
aaattggaagatcagatcaaaactcttaccaagactattgaaaaagttaatgaagttcac
gtgccaactttgtccaaagagtacattggaatgatggagtacaaaaaagaggatgaagaa
aggattgttcaaaatctgatccttgatttaaagccacgtggagttgtagttaatatgata
cctggccttccagctcatatcctattcatgtgtgtgaggtatgcagattatctgaatgat
gctgacatgctgaaatctttcataaatgtaaccattgatggcatcaaacaagttgttaag
gaaaattcagaagattttgaaatgttgtccttttggctttccaatacgtactattttctt
aactgtttgaagcaatacagtggggaagaggaatttatgaagtctaacaccccacgtcag
aataagaattgtttgaagcattttgatctgtcagaatatagacaaattcttagtgatttg
gccattcgtatctatcaccagttcattgttgtaatggagaacaacattcaacccatgatc
gtaccaggcatgctggaatatgaaagtctccaaggaatttctggcttgaaacctacaggg
ttccgtaaacgttcttctagtatagatgacacagatacgtacacaatgacctctatcctg
caacaactcagctatttttatagtactatgtgccagaatggcttggactctgagcttcta
aagcaagcggtgaagcagcttttctttctgattggagctgtcaccctcaatagtctcttc
ctccgcaaggacatgtgctcttgtagaaaaggaatgcagataagatgtaatatcagctat
ttggaagaatggcttaaagacaagaatcttcaaagcagtaatgccaaagaaactttagag
cctctagctcaagcagcatggctccttcaggtcaaaaagatcacagatgatgatgccaaa
gaaatatgtgaacactgcacatctctttctactgtgcagatagttaagatcctcaactca
tacactccaatagatgattttgagaaaagagtggctccatcatttgttcgtaaagtacag
gctatgctaaacaatcgtgaggacgttccacagttgatgctcgataccaaatatctattt
caagtgacgtttcctttcactccctctccacatgccttggaaatgatacaagtccccagc
agcttcaaacttggctttctcacaagggtttaa
DBGET
integrated database retrieval system
