Cygnus atratus (black swan): 118251756
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Entry
118251756 CDS
T09349
Symbol
PTPN23
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosine-protein phosphatase non-receptor type 23
KO
K18040
tyrosine-protein phosphatase non-receptor type 23 [EC:
3.1.3.48
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cata01009
]
118251756 (PTPN23)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cata03037
]
118251756 (PTPN23)
Enzymes [BR:
cata01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
118251756 (PTPN23)
Protein phosphatases and associated proteins [BR:
cata01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
118251756 (PTPN23)
Cilium and associated proteins [BR:
cata03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118251756 (PTPN23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
Y_phosphatase
ALIX_LYPXL_bnd
PTP-SAK
Y_phosphatase3
Tc-R-P
DSPc
ORF6C
PTP-NADK
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
118251756
NCBI-ProteinID:
XP_050565249
LinkDB
All DBs
Position
2:complement(1000467..1013921)
Genome browser
AA seq
1677 aa
AA seq
DB search
MEAVPRMPMIWLDLKEAGEFAFNAAVKKFVLKNYGENPESYNEELRKLEALRQNAVNVPR
DFEGCSTLRKYFGQLHYLQSRIPMGAEQEAAVPIAWTEIFSGKTVTHEDIKYEQACVLYN
LGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFTYLRXHFPHSYSVDMSHQILNLNINL
MLGQAQECLLEKSMLDNRKSFLVARISAQVVDYYKEACRALENSETASLLGKIQKDWKKL
VQMKIYYFAAVAHLHMGKQAEEQQKFGERVVYFQSALDKLNEAIKLAKGQPETVQEALRF
TMDVIGGKYNSAKKDNDFIYHEAVPALDTLQAVKGAPLVKALPVNPTDPAVTGPDIFAKL
VPMAAHEASSLYSEEKAKLLRDVMAKIEAKNEVLDQFMDSMQLDPETVDNLDMYSHIPPV
LMEKCAALSVRPDTVKNLVQSMQVLSGVFTDVEASLKEIRDLLQEDEAQERKLQELLGKG
PAPRGSPPPPSAGLAEVSKECSKYMEVHEKASFTNTELHKAMNLHIGNLRLLGGPLEQVR
AALPSPALTEDDKQVLQNLKRILVKVQEMRDQRVSLEQQLREMIQKDDITTSLVTADRSE
MKKLFEEQLKKYDQIKVYLEQNLAAQENILKALTDANVKYAAVRKALAEVEHKWNATVQT
LVASYEAYEDLMKKSQEGKDFYTDLEGKAAKLLEKARAACQAAEANRQQILEKEMKKHPP
PRPTAPKPALQKKPPELEAGGPEAAEVPQLGSLGLADLPEELRSLPPDVLAGHLARLPPS
TLAALALDPLFPAAPLVRGAVQPGYAGPHVLPPRSSPQHGPAASYGLGQAGLPAPGPLRP
PAMGPAPVGAQPPPAGGPEQGPATRPATTTVDSVQAPISSCAAPPRLPSQGPAVPPGGFL
PPQRPGAPPASFPYAPGGLQQPFGQPAPHPFPPGQHPHAAFAPAAQLQPGMELPARPQGL
GGPQQFPPQAPFLPPGRPQLPLPFQPPARPPLPPQFAQQPFSGPVGQLPPPAPGQPPLCP
QLYPLPGQDKLPPHGLPPHTGALPFTGQSGPHHAAPSPSPVLSQMQGPVVVQGPLVPSPA
PSPQPALPLQPPALVPGSGAPPQRPPPSLTPGAAPGPGEAPFQRQSSSTDDLLSSSPESQ
HGGSKAAVGQPLLQPTKADAKEGQKPKALQLIENDPYEKPERVLRLLAELDRFRGLVERL
ERPAPGGAAATELDAVWKELQDAQERDARQLSIAIARCYSMKNRHQDIMPYDRNRVVLRS
GKDDYINASRVEDLSPYCPTVIATQAPLLGTAADFWLMIYEQKVSVVVMLVSEQELDKQK
VLRYFPAERGQPVVQGPVTLVLTGLKAAPTHVERMITLQYRDQSLKRTVVHLQFTSWPEL
GLPDSKGSLLRFIQEVHGHYLHQRPLHTPIVVHCSSGVGRTGAFCLLYAAMQEVEAGNGI
PDLAQLVKRLRQQRKHMLQEKLHLKFCYEAVLQHAEQVLHRHGVGTPPVPKPPNSTSPKL
YFHQDPQDLVLGGDLSISSIQATIAKLSIKPAGVGGEPGGAWGPDPAPLAPLPALPDGAL
DGVLDGSAAPLPEPTPPAPPVPEPPAEAESSNHVEESPEPPAAEPPAPPASAPSSSSLEL
LASLTPEAFTLDASLKGKQRMNKQNFLQAQTGEGLRGPRPSDDPLSMLDPLWTLNKS
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgccccgcatgcccatgatctggctggacctgaaggaggccggcgagttc
gccttcaacgccgccgtcaagaagtttgtcttgaagaactacggggagaacccggagagc
tacaacgaggagctgcgcaagctggaggcgctgcggcagaacgccgtcaacgtccccagg
gacttcgagggctgcagcacgctgcggaaatacttcgggcagctccactacctgcagagc
cggatcccgatgggtgccgagcaggaggccgcggtccccatcgcgtggaccgagatcttc
tcgggcaagacggtgacccacgaggacatcaagtacgagcaggcgtgcgtcctctacaac
ctgggtgcgctgcactccatgctgggcgccatggacaagagggtgtcagaggagggcatg
aaggtttcgtgcacccacttccagtgcgctgccggggccttcacctacctgcggnaccac
ttcccccactcgtacagcgtggacatgagtcaccagatcctcaacctcaacatcaacctc
atgctgggccaagcgcaggagtgcctgctggagaaatccatgctggacaacaggaagagc
ttcctcgtggcccggatcagcgcccaggtggtggattactacaaggaggcctgccgggcg
ttagagaactcggagacggcctcgctgctgggcaagatccagaaggactggaagaagctg
gttcagatgaagatctactattttgccgccgtggcccacctgcacatgggaaaacaggcc
gaggagcagcagaagttcggggaaagggtcgtctacttccagagcgctctggataagctc
aacgaggctatcaagctggcaaagggccagcccgaaaccgtccaggaagccctgaggttc
accatggacgtgatcggcggcaagtacaattcggccaaaaaggacaacgacttcatctac
cacgaagccgtgcccgccttggacaccctgcaggccgtgaaaggtgccccgctggtgaaa
gccctccccgtcaaccccacggacccggctgtcaccggccccgatatcttcgccaagctg
gtgcccatggctgcccacgaggcctcctcgctctacagcgaggagaaggccaagctgctg
agagacgtgatggccaagatcgaagccaagaacgaagtgctggaccagttcatggactcc
atgcagctggaccccgagaccgtggacaacctggacatgtacagccacatccctcccgtc
ctgatggagaagtgcgccgcgctcagcgtgcgccccgacaccgtcaagaacctcgtccag
tccatgcaggtgctctctggggtcttcaccgacgtggaggcctccctgaaggagatccga
gacctcctccaggaggacgaggctcaggagcggaagctgcaggagctgctggggaagggc
ccggcgccgcggggctcccctccgccgccctccgcggggctggccgaggtcagcaaggag
tgctccaagtacatggaggtgcacgagaaggccagcttcaccaacaccgagctgcacaag
gccatgaacctgcacatcggcaacctccgcctcctcggcgggccgctggagcaggtccgg
gccgcgctgccctcgcccgcgttgaccgaagacgacaagcaggtgctgcagaacctgaag
cggatcctggtcaaggtgcaggagatgcgggaccagcgcgtgtccctggagcagcagctg
cgcgagatgatccagaaggacgacatcaccacctcgctggtcaccgccgaccgctccgag
atgaagaagctctttgaggagcagctgaagaagtacgaccagatcaaggtgtacctggag
cagaacctggccgcccaggagaacatcctgaaggcgctgacggacgccaacgtcaaatac
gcagccgtgcgcaaggccctggccgaggtggagcacaagtggaatgccaccgtccagacc
ttggtggcctcctacgaagcctacgaggacctgatgaagaagtcccaggaggggaaggat
ttctacaccgacctggaggggaaagccgccaagctgctggagaaggcgcgggcggcctgc
caagctgccgaagccaaccggcagcagatcctggagaaggagatgaagaagcacccgccc
ccccgccccacggcccccaagccggccctgcagaagaagcctccggagctggaagcgggc
gggccggaggcagccgaggtgccgcagctcggctccctgggcttggccgacctgcccgag
gagctgcgcagcctgccccccgacgtgctggccgggcacctggcccgcctgcccccctcc
acgctggccgctctcgccctcgacccgctcttccccgccgcccccctggtccgcggcgcg
gtgcagcccggctacgcggggccccacgtgctgcccccacgctcgtccccgcagcacggc
cccgctgcctcctacggcctgggccaagccgggctgcccgcacccggccccctcaggccc
ccagccatggggccggcccccgtgggtgcccagccaccacccgcgggtggccccgagcag
ggcccggccacccggccggccaccaccaccgtggacagcgtccaggcccccatctccagc
tgcgcggcccccccacggctccccagccagggcccggccgtgccccccggtggcttcctg
cccccccagcgcccgggcgccccccccgcctccttcccctacgccccgggggggctgcag
cagcctttcgggcagccggctccgcaccccttccctcctgggcagcacccccacgccgcc
ttcgcccccgcggcgcagctgcagcccggcatggagctgccagctcgcccccagggcctg
gggggcccccagcagttccccccccaagcccccttcctgccccccgggcgaccccagctc
ccgctgcccttccagcccccggcccggcccccgctgcccccccagtttgcccagcagccc
ttctccggccccgtggggcagctgccccccccagcccctggccagcccccgctgtgcccc
cagctctacccgctgcccggccaggacaagctgcccccccacgggctccccccgcacacg
ggggccctgcccttcaccggccagtcgggcccccaccacgccgccccttctcccagcccg
gtcctgagccagatgcagggcccggtggtggtgcagggccctctggtcccctccccggca
ccgtccccgcagccggccctgcccctgcagcccccggctctggtgcccggctccggcgcc
ccgccgcagagacctccgccctcgctgacccccggcgcggccccgggccccggcgaggcc
cccttccagcggcagagctcctccaccgacgacctcctgtcctccagccccgagagccag
cacggcggctccaaggcggccgtgggccagccgctgctgcagcccaccaaggccgacgcc
aaggagggccagaagcccaaggccctgcagctcatcgagaacgacccctacgagaagccc
gagcgcgtcctgcgcctgctggctgagctcgaccgcttccgcgggctggtggagcgcctg
gagcgcccggcgcccggcggcgccgccgccaccgagctggacgcggtgtggaaggagctg
caggacgcccaggagcgcgacgcccggcagctctccatcgccatcgcccgctgctactcc
atgaagaaccggcaccaggacatcatgccctacgaccggaaccgcgtcgtcctccgctcg
ggcaaggacgactacatcaacgccagcagggtggaggacctctcgccctactgccccacc
gtcatcgccacccaggcgccgctgctgggcaccgccgccgacttctggctcatgatctac
gagcagaaggtctccgtcgtcgtcatgctggtgtcggagcaggagctggacaagcaaaag
gtgctgcgctacttccccgcggagcggggccagcccgtggtgcagggccccgtcacgctc
gtcctcaccggcctgaaggccgcccccacgcacgtggagcggatgatcacgctgcagtac
cgcgaccagagcctcaagcgcaccgtcgtccacctgcagttcacctcctggcccgagctg
ggcctgcccgacagcaaggggagcctcctgcgcttcatccaggaggtgcacggccactac
ctgcaccagcgcccgctgcacacccccatcgtcgtgcactgcagctccggcgtgggccgc
accggggccttctgcctgctgtacgcggccatgcaggaggtggaggcgggcaacggcatc
cccgacctggcccagctggtgaagcgcctgcggcagcagcgcaagcacatgctccaggag
aagctccacctcaagttctgctacgaggccgtcctgcagcacgcggagcaggtcctgcac
cgccacggcgtgggcacgccgcccgtccccaagccccccaacagcacctcccccaagctc
tacttccaccaggacccgcaggacctggtgctggggggggacctgtccatcagctccatc
caggccaccatcgccaagctcagcatcaagcccgcgggagtagggggggagcctgggggg
gcctgggggcctgatcctgccccgctggcgccattgccggcgcttcccgacggcgcgctg
gatggcgtgctggatggcagcgccgcgcccctccctgagccaacccccccagcgccgccc
gtgcccgagccccctgccgaggccgagagcagcaaccacgtggaggagagccccgagccc
cccgcggccgagcccccggcccccccggcctccgctccctcctcctcgtcgctggagctg
ctggcctccctcacgcccgaggccttcaccctggacgcgtccctgaagggcaagcagcgg
atgaacaagcagaacttcctccaggcgcagacgggcgaggggctgcgggggccccggccc
agcgatgaccccctcagcatgctcgacccgctctggacactcaacaagagctga
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