Cygnus atratus (black swan): 118252008
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Entry
118252008 CDS
T09349
Symbol
USP8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X5
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04137
Mitophagy - animal
cata04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118252008 (USP8)
04137 Mitophagy - animal
118252008 (USP8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118252008 (USP8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118252008 (USP8)
04121 Ubiquitin system [BR:
cata04121
]
118252008 (USP8)
Enzymes [BR:
cata01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118252008 (USP8)
Peptidases and inhibitors [BR:
cata01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118252008 (USP8)
Membrane trafficking [BR:
cata04131
]
Endosome - Lysosome transport
Others
Others
118252008 (USP8)
Ubiquitin system [BR:
cata04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118252008 (USP8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Metallothio_Pro
Motif
Other DBs
NCBI-GeneID:
118252008
NCBI-ProteinID:
XP_035410684
LinkDB
All DBs
Position
11
Genome browser
AA seq
1149 aa
AA seq
DB search
MCFCFVFRTILIETSEKLYHPRRDISNNINMPAVASVPKELYLCTSLKDLNKKTEIKPEK
TSTKSYVQSALKIFKAAEESRLDRDEEKAYILYMKYVTVYNFIKKRPDFKQQQDYFHSIL
GPTNLKKAIEEAERLSDSLKLRYEEAEVRKRLEERDRQELQKKQEPKDDGKSSAKSSSEN
TADSKGKSQKINGESKHSLERRDQSESLSAVTAEKLFAMMTDKSIELIIMDARSSKDYQE
SCIPRSISVPEEAISPGVTASWIEARLPEDSRDQWKKRGHFDYVILLDWFSSAEDLKLGT
TLQSLKDALFKWESKTLLQNEPLVLEGGYENWLLCFPQYTTNAKVTPPQHSKIEAVTVSL
DFTYPSLEEPAPVPPVATIKTSTTEGIENEETEANLEERLKLLNRPSVEGAAVPKPDSSL
VVNPVSITRSIPEVDRTKKPSIKIPDDNRPKSESTLGDSQPIENGQIVPDRSTKPLRDVK
STLTEEEKSHIHAETAALLEKNKREKELRERQQEEQKERLKREKEEQEQKAKEEQREKEH
KEKLQQSKEEREQERDDQIKREQEEKEKERVRKETIEARKQNKNEPENIGAKRIEIDKVS
AEEREKGVRTPDMQRRVLGDASQTSVSVPGKQTGVKGQPDSGAQKPGPLREDSEQDTERL
KSQREPLMRARSEEMGRIIPGLPLGWVKFLDPITGTFRYYHSPTNTVHMYPPEMAPSSTP
PATPPTHKPKPQVTIEREREHSKLKRSYSSPDITQAIQEEEKKRIPVTPAVNRENKPIYY
TKAEISRLSASQIRNLNPVFGGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNL
YQDDINRSNFLGHKGEVAEEFGVIMKALWTGQYKYISPKDFKITIGKINDQFAGYSQQDS
QELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDLRAAELAWQKHKQLNESIIVALFQGQ
FKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCK
TRRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNTLK
RYNLFSVSNHYGGLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFYSSY
EQRAVDMAT
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttttgttttgttttcagaacaatattgatagagacttctgagaagctgtaccat
cctagaagggacataagtaacaacattaacatgcctgctgtggcatctgtacctaaggag
ctctatctctgtacttcattgaaagatctcaacaagaagacagaaataaaacctgaaaag
accagtacaaagagttacgtgcagagtgcccttaagattttcaaagcagcagaagaaagc
agattggaccgagatgaagaaaaagcttacatcctatatatgaaatatgtgactgtttat
aattttattaaaaagagacctgattttaagcagcaacaggattatttccattcaattctt
ggacctacaaatttaaaaaaagctattgaagaagctgaaagactctcagacagccttaaa
ctcagatatgaagaagctgaagttcggaaaagactcgaagagagggacagacaggagctg
cagaaaaagcaagaaccaaaagatgatggaaagagttcagccaaaagctcatctgaaaat
acagcagattccaaaggaaaaagccaaaagattaatggtgagagcaagcattcactggaa
agaagggatcaatctgaaagtctcagtgcagtcacagctgagaaactgtttgcaatgatg
acggacaaaagcattgaattgattataatggatgctcgaagctcgaaggattatcaggaa
tcctgtattccgagatctatcagcgtcccagaagaagctatcagtcctggagttactgct
agctggattgaagctagactcccggaagattctagagatcaatggaagaagagaggacac
tttgattatgttatactcctggactggtttagttctgcagaagacttaaagctaggaaca
actcttcagagcctgaaagatgcactttttaagtgggaaagcaaaactctactgcagaat
gaacctttagttctagaaggaggttatgaaaactggctcctttgttttccccagtacaca
acaaatgctaaagtaactccacctcaacatagcaagattgaagcagtaacagtttctttg
gattttacatatccatctttggaagagccagctcctgttccacctgttgccactataaag
acttctacaacagaagggattgaaaacgaagaaacagaagctaatttggaagagagacta
aaattacttaacagaccaagcgtagagggtgctgctgttccaaaacctgacagttcactt
gtagtcaatcccgtatctattacaagaagtatccctgaggttgatcgtactaaaaagcct
tcaataaaaattcctgatgataacagaccaaaatctgaaagtacactcggtgacagccag
cctattgagaatggacaaatagttccagatcggtccacaaaacctttacgtgatgtaaag
agcaccctgacagaagaagaaaaaagtcatatacatgcagaaactgctgccctgttagag
aaaaacaaacgagaaaaagaattgcgggagagacaacaagaagaacaaaaagaaagactc
aagcgagaaaaagaagaacaagagcaaaaagcaaaggaagaacagagagaaaaggaacac
aaagaaaagctgcagcaatccaaagaggagagagaacaggagagagatgaccagataaaa
agagaacaggaggaaaaggaaaaagaaagagtgcgcaaagagacaatagaagcaagaaaa
caaaataaaaatgaaccagaaaacattggtgcaaaaaggattgagattgacaaagtatct
gcggaagaaagagaaaagggagttcgaacaccagatatgcagagacgtgtgctgggtgat
gcatcgcagacttctgtgtctgttccaggcaagcaaactggggttaaaggacaaccagac
agtggagctcaaaagccaggaccccttagagaggattctgaacaagatactgaaagactt
aaatctcagcgggagccattgatgagagcacgaagtgaagaaatgggaaggataatacct
ggactgcctctgggttgggtaaagtttctggatccaatcactggaaccttccgttactat
cactcgccaacaaacactgttcacatgtacccaccagaaatggctccttcatccactcct
ccagctaccccaccaacgcataaacccaagccgcaggtgactattgaacgagaacgggaa
cactccaaactgaagcgctcctactcttccccagatataacccaagccattcaggaggaa
gagaagaaaagaattcccgtaactcctgcagtcaatcgtgaaaataaaccaatctattac
actaaagcagaaatttcaagactctctgcatcacaaattaggaatcttaatcctgtgttt
gggggatcgggaccagctcttacaggacttcgtaatctagggaacacttgctatatgaat
tccatattacagtgtctgtgcaatgcacctcacctggctgactattttaacagaaactta
tatcaagatgatattaacaggtcaaatttcctggggcataaaggtgaagtggctgaagag
tttggagtaataatgaaagctttatggacaggacagtataaatatatcagtccaaaagac
ttcaaaattacaattgggaagattaatgaccaatttgcaggatatagccagcaagactcc
caagaattgcttctctttctaatggatggcttgcatgaagatttaaataaagctgacaac
cggaaaagatacaaggaagaaaacaatgatcatcttgatgacctcagagcagcagaatta
gcctggcagaaacacaaacagctcaacgaatccatcatcgtggcactcttccaaggccag
ttcaaatctacagtgcagtgtctcacatgccacaagaagtcccggacctttgaggctttc
atgtatttgtcattaccacttgcatccactagtaaatgtacactgcaggaatgccttaga
ttgttctccaaagaagaaaagctcactgacaataatagattttactgtagccattgcaaa
actcgaagggattctttgaaaaaaatagaaatttggaaattaccacctgttcttcttgtg
cacttgaaacgattttcctatgatggaagatggaagcaaaaacttcagacctctgtagat
ttcccattggaaactcttgacctttcacagtatgttataggtccaaagaataccttgaag
agatacaatctattttcagtatcaaatcattatggtgggttggacggagggcactatacc
gcctactgcaaaaatgcctcaaaacagcgctggtttaagtttgatgaccatgaagtgtct
gagatctcagcatcatctgtgaaatcctcagctgcatatattctcttttacagttcttat
gaacagcgagcagtggacatggccacataa
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