Cygnus atratus (black swan): 118252050
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Entry
118252050 CDS
T09349
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118252050 (CHD2)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118252050 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
118252050
NCBI-ProteinID:
XP_035410752
LinkDB
All DBs
Position
11:15575307..15631008
Genome browser
AA seq
1838 aa
AA seq
DB search
MMRNKDKSQGEEGSVHSNASSHSASEEASGSDSASQSESEQGSEQGSEQGSESNSSSESS
ESQSESESESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKDEASSESENESPKRRGQKQMKKTNKWKREVSGEEEDEDGGEQGTSAESEPEPKKV
KARRPAQRRTVAKTNVKKPHKPQRGKKRKKPDSSEDDDDDEDDETPKRQTRRRAAKNVSY
KEDDDFETDSDDLIEMTGEGADEQQDNSETIEKVLDIRLGKKGATGASTTVYATEANGNP
SADFDPEKDEGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWL
AKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSATGHADFPANSRKTSSNDPEY
LCKWMGLPYAECSWEDEALISKKFQHCIDSFNNRNNSKTIPTRDCKVLKQRPRFVALKKQ
PSYIGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY
GPFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALI
TTYEILLKDKAVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKV
EQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE
NERENGVETLQSLIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTIKHYP
FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDN
NSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSA
TDELLSQFKVANFATMEEEEMELDERSQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPR
IRSSTKKAQTNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFT
DAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQL
KENPSEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPADPEERKKYRLTCRV
KAAHFDVDWGVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQT
RVDYLLKLLKKDLDKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNQ
SEEGEVKEDGLEKSPVKKKQKKKENKENKEKQTSTKKEKESDKEKKKTKDKKEKPKGGEA
KSGSKGKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKG
LTVQEQLEHTRNCLLKIGDRISECLKAYTDQDLIKLWRRNLWIFVSKFTEFDARKLHKLY
KMAHKKRSQEEEEQKKKEDMSSMKKPFRPEPSGSSRDSVMSQSHVPHNPHSQKLHLPPSH
APQQMHGHPRDNYGHPNKRHFSNTDRGDWQRDRKFNYGGNSNQVWGGERHHQYEQHWYKD
HHYGDRRSRGDPHRSSGNYRPNNLSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSDE
FRPQNYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHADKSGDYKQPLPPPHPAVSDPRSP
PSQKSPHDSKSPLDHRSPLDRSLEQKNNPDYNWNIRKT
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagtccacagcaatgcatcg
agtcactcggcatccgaagaagcctctggctctgactctgcaagccagtctgaaagcgag
cagggcagcgagcagggcagcgagcagggcagcgagtcaaacagcagctcggagtcctct
gagagtcagtctgaatccgaaagtgaatcaacgggttcgaaatcccagcagacccctcct
gaaaccaaagaaaaaccggcctctaagaaggaaaggatagcagatgttaaaaagatgtgg
gaagaatatcctgatgtttatggggttaggaggtcaaaccgaagcagacaagaaccatcg
cgatttaatataaaagatgaggcaagtagcgaatctgaaaatgagagcccaaaacgaaga
ggccagaagcaaatgaaaaaaacaaataaatggaaaagagaggtctctggtgaagaagag
gatgaagatggaggggagcagggtaccagtgcagagagtgagcctgaaccgaagaaagtt
aaagcaagaagacctgcccagaggagaacagtggcgaaaaccaatgttaaaaaacctcac
aaaccccagcgtgggaagaagaggaagaaaccggactcatctgaagacgacgatgacgat
gaagatgatgagacccccaagagacaaactcgacgaagagcagccaaaaatgtcagttac
aaagaagatgatgattttgagacggattctgatgacctgatagagatgactggggaagga
gctgatgaacagcaagacaacagtgaaactattgagaaagtcttggacatcaggcttgga
aaaaaaggagccactggtgcttccaccacagtgtatgcaactgaagccaatggcaaccca
agtgctgactttgaccctgaaaaggatgagggagaagttcagtacctgatcaaatggaaa
ggctggtcatacatccatagcacatgggagagtgaagagtccctgcagcagcagaaagtg
aagggcctgaaaaagctagagaacttcaagaaaaaagaggaggagatcaagcaatggctg
gccaaggtatcccctgaagatgtggaatatttcaactgccaacaggagctggcttcagag
ctgaacaaacagtatcaaatagtggagagagtaattgccgtgaagaccagcaagtctgcg
acggggcacgctgacttcccagcaaacagtcgcaaaacatcctcaaatgaccctgaatac
ctgtgcaagtggatggggctgccctacgcggaatgcagctgggaagatgaggctctgata
agcaagaaattccagcactgcattgacagcttcaacaaccgtaacaactccaaaacaatt
cctacccgggactgcaaggtattgaagcagagaccaaggtttgttgccttgaagaaacag
ccttcttacattggtggtgagaacctggagctgagagactaccagctggagggcctcaac
tggctcgctcactcatggtgcaagaacaacagcgtgatcctggctgatgaaatgggcctg
gggaagacgattcagacaatatcgttcctgtcgtacctcttccaccagcaccagctgtac
ggccctttcctggtggtggtacctctgtcgactctcacctcgtggcagagagagtttgaa
gtgtgggcacctgagataaacgtggtcgtttacatcggagacctcatgagcaggaacatg
atacgtgaatatgagtggatccactctcagtctaaaaggttgaagttcaatgcacttatt
acaacatatgagatcctcctcaaagacaaggctgttttgggaagtattaactgggccttt
ctaggcgtggatgaagcccatcggttgaaaaatgatgactctttgctgtacaaaacattg
attgacttcaagtccaaccacaggctgctgatcactggcaccccacttcaaaattccctc
aaagagctctggtccctgcttcatttcatcatgccggagaagtttgagttctgggaagat
tttgaagaagatcacgggaaaggtagagagaatggctaccagagccttcacaaagtcctg
gagccctttctcctgcgcagagtgaagaaggatgtggagaaatctttgccagccaaagtg
gagcagatcctccgggtggaaatgtctgctctgcagaagcagtattacaagtggattttg
acaagaaactacaaagctctttcaaagggaacacgggggagcacatctggtttcctgaac
attgtgatggagttgaagaagtgctgcaaccactgctaccttatcaaacctcctgaggaa
aacgagagagagaatggcgttgagaccctgcagtctctgatcaggagcagtggaaagcta
attctcttggacaagctgctgaccaggctgcgagacagaggcaaccgagtgctgatcttc
tcccagatggtgaggatgctggacatcttggcagagtacctgactatcaaacactaccct
tttcagcgcttggacggctcgatcaaaggggagatccgaaagcaggcgctggaccacttc
aacgctgacggctccgaggacttctgtttcttgttgtcaacacgagctggagggctagga
attaatttggcctctgctgacactgtcgttatctttgactcggactggaacccccaaaat
gatcttcaggctcaggcccgggctcaccgcattggacaaaagaagcaggtgaatatttac
cggctggtcacaaagggtacggtagaggaggagatcattgagagggccaagaagaaaatg
gtgctggatcatttggtgatccagcgtatggacaccactggccggactgttctggacaac
aactctgggcgatccaattcaaatccattcaacaaagaagagctgacggctattctgaaa
tttggagctgaagatctcttcaaggagcttgaaggggaagagtcagagcctcaggagatg
gacatcgacgagattttgcgtttggctgaaacacgagagaacgaagtgtccaccagtgcc
accgacgagcttctctcgcagttcaaggtggccaactttgcaaccatggaggaggaagag
atggagctggacgagcggtcccagaaggactgggacgatatcattccagaggagcagagg
aaaaaggtggaggaggaagaaaggcagaaagaattggaggaaatctacatgctgcctcgc
atccgtagctcgactaaaaaggcacaaacgaatgacagtgaatcagatgcggaaactaag
agaaggcttcagagatcatctggatcagaaagcgagactgatgacaccgatgacgagaag
agaccaaagcgcaggggacgtcctcggagtgttagaaaagataccgtggaaggatttact
gatgctgaaatccggaggtttatcaaggcttacaagaagtttggactgcctcttgaacgg
ctggagtgcatcgcccgggatgcggagctggtggataagtctgtagctgacctgaagcgg
ttaggggagctcatccacaacagctgtgtgtcagcaatgcaagaatacgaggagcagctg
aaagaaaatccaagtgaagggaaaggacctgggaaaagaagaggtcctactatcaagatc
tctggtgtccaagtcaatgtgaaatccatcatccagcatgaagaggagtttgaaatgctg
cataaatccatccccgcagacccagaggaaagaaagaagtaccgcctgacgtgccgtgtc
aaagctgcccattttgatgtagactggggagtggaagaggattctcgcttgttagtggga
atttacgagcatggttatggaaactgggaactaattaaaacagatccggagttgaagtta
tctgataagatcctacctgttgagacagataagaaacctcagggaaaacagctccagacc
cgagttgattatctactgaaactgctgaagaaggacctggacaagaaagaaaacatgaaa
gatggggaagagggcaagctaaagaagaggaaaccacgagtaaagaaagagaacaaggct
cccaaagtcaaggatgagcatgggaacgaactctcctctcctcggcactcagacaaccag
tcagaagagggtgaagtcaaggaggatggcttggaaaagagcccagtgaaaaagaaacag
aagaagaaagagaacaaggagaacaaagaaaaacagacaagcactaagaaagaaaaggaa
agcgataaagagaagaagaagacaaaagacaagaaagagaagcctaaaggtggtgaagcc
aaatctggaagtaaagggaagagatcgcaaggtcccgtccacattacagcggggagtgaa
ccagtccccattggagaagacgaggacgacgatctggaccaagaaacattcagcatatgc
aaggaaaggatgagaccagtgaaaaaagctctgaagcaactagataagcctgataaggga
ctgacggttcaagaacagctggagcacacacgcaactgcctcctaaaaattggggaccgc
atctctgagtgccttaaagcctacactgaccaggatcttatcaagctatggagaaggaac
ctatggatatttgtgtcaaagttcacagaatttgatgccagaaaactgcacaaactctac
aagatggctcataagaaaagatcacaggaagaggaggagcagaagaagaaggaggacatg
tccagcatgaagaagccgttccgcccagagccttcaggctccagccgcgattctgtgatg
tcccagtcccacgtgcctcacaatcctcattcccagaagctccacctgcccccttcccac
gccccgcagcagatgcatgggcacccccgtgacaactacggccatcccaacaagaggcat
ttcagcaacacagacaggggagactggcagagagatcgaaagttcaactacggcggcaac
agcaaccaggtgtggggtggggagcggcaccaccaatacgagcagcactggtacaaggac
caccactacggggaccggcgatctcgtggagacccccaccgaagctctgggaactacaga
ccaaataacctctcccgcaagaggccctatgaacagtacaacagtgaccgagaccacaga
ggccaccgagattattatgacaggcaccaccatgactccaagcgccgacgatccgatgag
ttcaggcctcagaattaccaccagcaggatttccgacggatgtctgatcacaggccaccc
atgggataccatggccaaggaccttcggaccactaccggtccttccacgcagacaaatcg
ggagattacaaacagcctctccctccacctcaccccgcagtgtcggaccctcgctcaccc
ccgtctcagaaatctcctcacgactccaagtcgcccctcgatcacaggtcacctctggat
aggtcgttagaacagaaaaacaatccagattataactggaatattcggaaaacataa
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integrated database retrieval system
