Cygnus atratus (black swan): 118252094
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Entry
118252094 CDS
T09349
Symbol
PKD2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cata03037
]
118252094 (PKD2)
04040 Ion channels [BR:
cata04040
]
118252094 (PKD2)
Cilium and associated proteins [BR:
cata03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118252094 (PKD2)
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118252094 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
SU10_portal
Motif
Other DBs
NCBI-GeneID:
118252094
NCBI-ProteinID:
XP_035410806
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All DBs
Position
4:46062064..46083416
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AA seq
912 aa
AA seq
DB search
MAGRGDCRRGREQLELERLGEVARAGSCPPSPPPSACSRQAWSRDNPGFEPEEEEAAAAA
AAAAAAGGPVLEMDVEWGSPAASLGSGAAGQGGGGGGGRRQRRRLPAGRGGAAEAPSRHQ
GPPDGAAPRRAAWAKRLARRLRGLWGTRLMEESNTSRERYLKSVLRELVTYMIFLVVLCV
LTYGTVSSSMYYYTRVMSQLFLETPVSKMEKTDFKTLSTMDDFWKFTEGPLLDGLYWDMW
YNNKSMAENKSFIYYENLLLGVPRIRQLKVRNGSCSIPEDLKDEIKDCYDVYSVANEDTA
PFGLRNGTAWTYTNEKDLNGSSHWGLLATYSGAGYYQDLSRSREVTAVQIASLKKNLWLD
RGTRAAFIDFSVYNANINLFCVVRLLVEFPATGGLLTSWQFQPVKLIHYISTFDFFLAAC
EMTFCLFVLYYTVEEILEIHIHRLHYFRSLWNCLDILIIVLSVAAIGISIYRTSTVDMLL
KKLLEDQNSFPNFEPLAYWQMQFNNIAAVTVFFVWIKLFKFVNFNRTMSQLSTTMSRCVK
DVVGFAIMFFIIFLAYAQLAYLVFGTQIDDFSTFQDCIFTQFRIILGDFNFTEVEEANRI
LGPIYFTTFVFFMFFILLNMFLAIINDTYSEVKSDMAQQKAEMELSDLIRKGYNKAMVKL
KLKKTTVDDISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEH
QQMRDDLEKEREDLDLDRSSLPRPLSSRSFPRSLDDSEEDEDEDSGHSSRRRGSSSSGVS
YEEFQVLMRRVDRMEHSIGSIVSKIDAVIVKLEAMERAKLKRRDVLGRLLDGVTEDERLG
RDNEIHREQMERLVREELERWESDDTASQMSHRLGTPLGLNGQPRSRNSRPSSSQSDGID
GGGGNGGNNIHV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcggcgactgccggcgcggccgggagcagctggagctggagcggctgggc
gaggtggcgcgggccggctcctgcccgccgtcgccgccgccgtccgcctgctcgcggcag
gcgtggagccgggacaacccgggcttcgagcccgaggaggaggaagcggcggcggccgcg
gcggcggcggcggcggcgggggggccggtgctggagatggacgtggagtggggcagcccc
gcggcgtcgctgggcagcggcgcggcggggcagggcggcggcggcggcggcgggcggcgg
cagcggcggcggctgcccgcggggcgcggcggggcggcggaggctccgagccgccaccag
gggccgcccgacggcgccgcgccgcgccgggccgcctgggccaagcggctggcccggcgc
ctgcgaggtctgtggggcacaagactcatggaagaaagcaacaccagcagagagcgatac
ctgaaaagtgttttacgggagttggttacatacatgattttccttgtggtcttgtgtgtc
ctgacttacgggacagtgagttccagtatgtattactacacgagggttatgtcacagctc
ttcctggaaacacctgtctcgaaaatggagaaaactgacttcaaaacgttgtccacaatg
gacgacttctggaagttcacagaaggccctctgctggatggtctttactgggatatgtgg
tacaacaacaaatccatggcagaaaacaaaagcttcatttattacgagaacctgctccta
ggggtgcctcgcattcggcagctgaaagtgagaaatggctcgtgctcgatacccgaggat
ctaaaggatgaaatcaaagactgctacgatgtctattctgtagctaatgaagatactgca
ccttttggacttcgaaatgggacagcttggacatacaccaatgagaaggatttgaatggg
agcagccactggggcttgctcgccacgtacagcggggctggttattaccaagacctctca
aggagcagggaagtgacagctgtgcagattgctagccttaagaagaacctgtggctggac
agagggacgagagcagctttcattgatttctccgtatacaatgcgaacatcaacctattc
tgcgttgtaaggttgttagtggagtttccagcaactggaggccttcttacgtcttggcag
tttcagccagtgaagctgattcactacatctctacttttgattttttcctggcagcctgt
gaaatgacattttgtctctttgttctctactatacggtggaagagatattagaaattcac
attcataggttgcactacttcagaagtctttggaattgtcttgatatccttatcattgtg
ctctctgtggcagctataggaattagcatctacaggacttcaactgttgatatgctcctg
aagaagctgctggaagatcagaactcattccccaactttgaacccttggcctattggcaa
atgcaattcaacaacattgccgcagtcactgtgttttttgtctggattaagcttttcaaa
tttgtgaacttcaacagaacgatgagtcagttatccactaccatgtctcgctgtgtcaaa
gatgtcgttggcttcgctattatgttttttattattttcttagcatatgctcagttggcc
tatcttgtctttggtactcagattgatgatttcagcactttccaggactgtatatttact
cagttccgcatcattttgggagacttcaacttcacagaggttgaagaagctaatcgaatt
ttgggaccaatttatttcactacatttgtgttctttatgttcttcattcttttgaacatg
tttttggccattatcaatgatacatattctgaagtgaaatcggatatggcacaacagaag
gcagaaatggaactgtctgaccttatcagaaagggctacaacaaagccatggtcaaactt
aaactgaaaaaaactactgttgatgacatttcagaaagcctaagacaaggcggggggaaa
ctaaattttgatgaactccggcaagatctaaaagggaagggccacactgatgcagagatt
gaagcaatatttaccaaatatgatcaggatggggaccaggagttgacagagcatgaacac
cagcagatgagagatgacctggaaaaagagagggaggatctggacctggacaggagctct
ctgccacgtcctctaagcagccgcagcttcccccggagcttggatgactctgaggaggac
gaggatgaagacagtgggcacagctccaggaggaggggcagcagctctagtggggtttca
tacgaagagttccaagtactcatgaggcgggttgatcgcatggagcattcaatcggcagt
atcgtctccaagattgatgcggttattgtgaagcttgaagcaatggagagagccaaactg
aaaaggagagatgtgttgggaagactgttggacggagtgacagaggatgaaagactgggt
cgtgacaatgaaatccacagggaacaaatggagcggcttgtgcgagaggagttggagcgg
tgggaatcagatgatacggcatcccaaatgagtcatcgtttgggaacaccgcttggactg
aacggccagcctcgttcgaggaactcgcggccatcttcctcgcagtcggatggtattgat
gggggaggagggaatgggggaaataacatccatgtgtag
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