Cygnus atratus (black swan): 118252184
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Entry
118252184 CDS
T09349
Symbol
TLR4
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04145
Phagosome
cata04217
Necroptosis
cata04620
Toll-like receptor signaling pathway
cata04621
NOD-like receptor signaling pathway
cata05132
Salmonella infection
cata05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118252184 (TLR4)
09143 Cell growth and death
04217 Necroptosis
118252184 (TLR4)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118252184 (TLR4)
04621 NOD-like receptor signaling pathway
118252184 (TLR4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118252184 (TLR4)
09171 Infectious disease: bacterial
05132 Salmonella infection
118252184 (TLR4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118252184 (TLR4)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cata04054
]
118252184 (TLR4)
04090 CD molecules [BR:
cata04090
]
118252184 (TLR4)
00536 Glycosaminoglycan binding proteins [BR:
cata00536
]
118252184 (TLR4)
Membrane trafficking [BR:
cata04131
]
Endocytosis
Phagocytosis
Toll-like receptors
118252184 (TLR4)
Pattern recognition receptors [BR:
cata04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
118252184 (TLR4)
CD molecules [BR:
cata04090
]
Proteins
118252184 (TLR4)
Glycosaminoglycan binding proteins [BR:
cata00536
]
Hyaluronan
Cell surface receptors
118252184 (TLR4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_1
TIR_2
LRR_5
LRR_6
LRR_9
LRR_EndoS
LRR_R13L1-DRL21
Il2rg
Motif
Other DBs
NCBI-GeneID:
118252184
NCBI-ProteinID:
XP_035411061
LinkDB
All DBs
Position
19:complement(8111929..8116648)
Genome browser
AA seq
849 aa
AA seq
DB search
MPGLLKMPRRAALLPWTFGELLRLALILSQLAVCLLSPCLEVIPSKAFRCMGLNISGVPP
EVPNTTQELDLSFNNLKSLSSNYFSSVPELRLLDLSRCHIHTIEDNSFVDLHELSTLILT
ANSLQYLESATFYGLTSLKKLVLVETSISSLTDLPIGHLHTLQELNLGHNNIASLKLPKY
FSNLTSLRHLSFFSNKITYISKGDLDALCEANRLNLTLVLSLNNIKYIQPGSFAKIHLGE
LVLRSSFENFHDMHTSLHGLAGLQVNRLIVGEFRDSQKLEDFQNGLLSGLCQVQMQEFVL
ICFRNFENNTDTLFNCIGNVSSIRLVNVNLEEVSEVPMFPQVKHLECKKCKFKEVPAVKL
SLFKELRVLRITQSKHLNSFRQKFKNLTYLEVIDLSENRLSFTSCCSPQFPGSANLRHLN
LSFNSDISLTGDFTNVKNLLYLDLQHTKLDDHGTYPVFLSLQKLIYLDISYTKTHVKSDH
VFHGLNSLQVLKMAGNSFENNKLSNNFKNLSHLHTLDISNCKLVQVDQGTFNALSELKEL
NISNNKLLTFDPVVYKPLQALTALDFSHNQLSVLLDSGLEILPASLVYLDLSHNLFECSC
SYLNFMKWIKEKEDLLQNKHLMVCHTPAYMKNLSLSSFYMSSCRPSPSTVACSVVILLAA
VVFIFLIYKYYFQLYYFLVLLSGCKHSAERGTTYDAFVIHSSKDQEWVIKELVEPLEGGK
PPFQLCLYYRDFLPGVPIVTNIIQEGFLSSRNVIAVISTDFLESKWCSFEFDIAQSWQLV
EDKAGIIMIVLEEVNKTLLRQKLGLSRYLRRNTYLEWKDKEISKHIFWRQLTGVLLQGKK
WNHEEEKLM
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcctcctgaagatgcccaggagagcagctctcctcccatggacattcggggag
ctgctgcggctggcgctcatcctgtcgcagctggcagtctgcctcctcagtccctgtttg
gaggtcatccctagcaaagctttcagatgcatggggctgaatatctctggagttccccct
gaagtcccaaacaccacccaggagctggacctcagcttcaacaatctgaaatcactgagc
tcaaattatttttcatcagtccctgaactgcggcttctggatctttcaaggtgccacatc
catacaatagaagataactcttttgtggatcttcatgaactttccaccttaattttaact
gccaattccctccagtacctggagtcagcaaccttctatggtttaacatctctgaaaaaa
ctagtattggtggaaaccagcatatcctctctgactgacctaccaattggacacttgcat
accctacaggagctgaatttgggccacaacaacattgcttcattgaagcttcccaagtat
ttttccaacctgacctctctcaggcacctgagctttttctccaataagattacatatatc
tccaaaggagaccttgatgccctgtgtgaagcaaacaggctcaacctcaccttggtgctc
tctctgaataatataaaatacatccagccggggtcctttgcaaagattcatcttggtgaa
ctggttctgagatcctcttttgagaacttccatgacatgcacacttctcttcatggcctg
gcagggctacaggtcaacagactaatagttggagaattcagggacagtcagaaactggaa
gattttcagaatggactcttgagtggactctgccaggtacagatgcaggagtttgtctta
atctgtttcaggaattttgagaataacacggacaccctttttaactgtataggcaacgtc
tccagtattcggctggtgaacgtcaatctcgaagaggtgtcagaggttcctatgtttcct
caagtgaaacatctggaatgcaagaaatgcaagttcaaggaagtgcctgctgtgaagctg
tccctctttaaggagctgagagtgcttcgtattacccagagcaaacaccttaatagcttc
cggcagaaatttaagaatctaacttacctggaggtcatagatttgagtgagaatcggctc
tccttcacttcatgctgttctcctcagtttcctgggtctgcaaacttgagacacttgaac
ctaagcttcaattctgacatcagtttgactggagacttcaccaatgtgaagaatctctta
tacttggaccttcagcacacaaagttagacgaccatggcacctaccctgtctttctatcc
cttcagaaactcatttaccttgatatttcctataccaaaactcatgttaaatccgatcat
gtatttcatggcctgaactctctgcaagtgctcaagatggcaggcaactcctttgagaac
aataaattgtccaataacttcaaaaacttgagccacctccacaccttggatatttcaaat
tgcaaattagtacaggtggatcaaggcacatttaatgctctctctgaactaaaagagctg
aacatcagcaacaataagctcctgaccttcgatcctgtagtctacaagcccctccaagct
ctcacagccctggatttcagccacaaccagctgagtgtcctgttggactcaggcctggaa
atcctgcctgctagtctggtctacctagatctctctcacaacttgtttgaatgctcttgc
agttacctgaactttatgaaatggatcaaagaaaaggaggacctgctgcaaaacaagcat
ttaatggtatgccacacacctgcatacatgaagaacttgagcctgtcaagcttctacatg
tcctcctgccgtcccagcccaagcacggtggcatgctcagtggtcatattgcttgctgca
gtggtgttcatattcctgatttacaagtactacttccagctctactacttcttggtgctg
ctcagtgggtgtaaacactctgcagaaaggggaaccacctatgatgcctttgttatccac
tccagcaaagaccaagaatgggtgataaaagagctggttgaacccttagaaggaggaaaa
cctcccttccaactctgtctttactacagggatttcctaccaggggtacccattgtcacc
aacatcatccaagaaggttttctaagtagcagaaatgtcattgcagtcatctccaccgac
tttctggagagcaagtggtgtagctttgagtttgacattgcccagtcctggcagctggtt
gaagacaaggctggaatcatcatgattgtactcgaagaagtgaataagaccttgctgagg
cagaagctggggctgtcccgatacctcaggaggaacacctatctggagtggaaagacaag
gagataagcaagcatatcttctggaggcagctcacaggagtcctgctacagggcaaaaaa
tggaatcacgaggaggaaaagctcatgtga
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