Cygnus atratus (black swan): 118252275
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Entry
118252275 CDS
T09349
Symbol
LAMC3
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04510
Focal adhesion
cata04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118252275 (LAMC3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118252275 (LAMC3)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
ATG17_like
MAD
Motif
Other DBs
NCBI-GeneID:
118252275
NCBI-ProteinID:
XP_050570550
LinkDB
All DBs
Position
19:complement(5387035..5403978)
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AA seq
1580 aa
AA seq
DB search
MAQPGGLCLLALLGLGFGAGGSPACHDPRGQPRRCMPVFENAAFGRAARATNTCGSPPED
YCLQMGARDASQLCQRCDAADPRLHHNASLLTDFHSQEESTWWQSQSMAFGIQHPNSVNI
TLHLGKAYEITYVRLKFHTSRPESFAIYKRSRADGPWVPFQYYSASCHKTYGKQPRHYLR
PGEDEQVAFCTDEFSDISPLSGGNVAFSTLEGRPSAYSFDGSPALQEWVTVTDLLISLNR
LNTFGDDIFKDPKVLQSYYYAISDFSVGGRCKCNGHASECVPDETGRLACVCQHNTAGTD
CERCQPFYQDRPWARGTAEAANECLPCNCSGRSEECFYDPELYRRSGHGGHCRHCRDNTA
GPHCERCRQNHYRWEPRAACQPCHCHPAGSLRPQCDSSGTCACKANVTGWKCERCKDGYH
SLSEGGCRPCACDPAGSVGTCDPNTGHCACKERVEGHLCNRCQPGWFNLQPHNPAGCTSC
FCYGHSAVCTAATGYEVIHVRSDFSRGLEGWAAAAVGAVAVPLHWADGEASIKWDGEEPM
DFLAPEKFLQNQHLSYGQPLTLLLGAEGNGTGTESRVPLLRAQLVLEGEGMEVTMSSSKS
QPRDGKQAVTFRLHEAEEGTEPSLSAFSFQRLLSNLSALRLRVSHGPGPGRLVLSEVWLT
SARLGSGVQAGWVEECACPPGYTGQFCQSCAPGFKRDVPFGGPFVACVPCACNQHGDCEP
RSGQCRCLHNTEGPSCERCSPGFYGNPFVGRFDDCKPCPCPYRSPCTEVPGSREVVCTHC
PLGQRGKRCELCDDGFFGDPLGQRGPVRPCAPCQCHGNVDLNAVGNCDTESGRCLRCLHN
TTGEHCQECRPGFYGDALAPSPAGKCAPCDCNPDGSAPGPEGCDPSTGQCRCLPHVTGRT
CGLCQPGYYGLLPTVGCKSCECHPAGSRDSGCHALTGQCSCQLGVAGLRCDRCDHGFFGF
SAKGCRACNCSPLGAVTPQCHENSTCVCRPGFVGYKCDQCQANFFPDPPSSGCQPCPSCY
GLVKDGADRLKAKLQEMEERLQTPGCDVHPGQSLVLGDAPRGDGLPGRHLLQGARAVLSV
QVGRLAGVLSAAQGRLSNASQASGCSDHGHPKTCVLLSEIGAVLQSAQREVLHAADTLAA
TEIPQEIPPQPTNWSRVALDARVLAERHGDAVAQVEAMVRRALNVSKASHELLQSLLEGR
AAWEAQRELEAGYEEIQQAQEELGAGMLEVAAEARRALATIQQANADVAEKLLQVAAPGQ
QALLAQAGALVQDLGALERAVGTQELSAQQAIAASRTLAAGLRRDLQGTRSFTQLQDRAG
TARSLATSAVSRGKAALSGTESVLASLEGMRKVLGHRKGQAALSRRMALVRDRTMVEAQK
KIKQAEKMLGNSLSVSTTARRTAGEAEQVAGESAKRARAVLQGSKQAHKHAVQLATRVNK
TQQELVRQERVAEELRGGLEEAEQVGTEVSEMAKSLQEARGSLMADIKTLKDLLSSLGNL
EQGTQVEAALGAGRLQLERLRLRLAAPGALAKRLSQLQQEAAQQQEKIQAVESDLAEIRA
DKRNLEDILRSLPEGCSEWQ
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacctggggggctctgcctgctggccctgctggggctggggtttggggcgggg
ggctcaccagcctgccacgacccccggggccagccccgtcgctgcatgcccgtttttgag
aacgccgccttcggccgtgccgcccgggccaccaacacgtgcggctcgccccccgaggac
tactgcctgcagatgggcgcccgcgacgccagccagctctgccagcgctgcgacgccgcc
gacccccggctgcaccacaacgcctccctcctcaccgacttccacagccaggaggagagc
acctggtggcagagccagtccatggccttcggcatccagcaccccaactccgtcaacatc
acgctccacctgggcaaggcttacgagatcacctacgtgcggctcaagttccacaccagc
cgccccgagagcttcgccatctacaagcgcagccgcgccgacgggccctgggtgcccttc
cagtactacagcgcgtcctgccacaagacctacggcaagcagcccaggcactacctgagg
ccgggcgaggacgagcaggtggccttctgcaccgacgaattcagcgacatctcccccctg
agcgggggcaacgtggccttctccaccctcgagggccggcccagtgcctacagttttgac
gggagccccgcgctgcaggagtgggtgaccgtcaccgacctgctcatctccctgaaccgc
ctcaatacttttggggacgacatcttcaaggaccccaaggtgctgcagtcgtactactac
gccatctccgacttctctgtcggcggcaggtgcaaatgcaacggccacgccagcgaatgc
gtgccggacgagacaggacggctggcgtgcgtgtgccagcacaacacggccggcaccgac
tgcgagcgctgccagcccttctaccaggaccggccctgggctcgcggcaccgccgaggct
gccaacgagtgtctcccctgcaactgcagcggtcgctcggaggagtgcttctacgacccg
gagctgtaccgccgcagcgggcacgggggccactgccgccactgccgcgacaacacggcc
gggccccactgcgagcgctgccggcagaaccactaccgctgggagcctcgggccgcctgc
cagccctgccactgccaccctgcaggctccctgcggccccaatgtgacagctcggggacc
tgcgcctgcaaagccaacgtgacgggctggaagtgcgagcgctgcaaggacggctatcac
agcctgagcgaaggcggctgcagaccctgcgcctgcgaccccgccggcagcgtgggcacc
tgcgaccccaacacgggacactgcgcctgcaaggagagggtggaggggcacctgtgcaac
aggtgccagcctggatggtttaacctgcagccccacaaccccgccggctgcaccagctgc
ttctgctatggccactccgctgtctgcacagcagcgaccggctacgaggtgatccacgtg
cgctccgacttcagccgagggctggagggctgggctgcagctgcggtgggtgccgtggcc
gtgcctctgcactgggctgatggggaggcgagcatcaagtgggacggagaggagccgatg
gattttcttgcaccagagaagtttctgcagaaccagcatctcagttacgggcagcccctg
accctgctgctgggagcagaggggaacgggaccgggacagagagcagggtgcccctgctc
cgcgcccagctggtgctggagggcgaggggatggaggtcaccatgtccagcagcaagagc
cagccacgggacggaaagcaggctgtcaccttcaggctgcacgaggccgaggagggcacg
gagccttcgctgtcggccttcagcttccagcgcctgctctccaacctgagcgccctccgc
ctccgcgtgagccatggccccgggccaggcaggctggtgctgagtgaggtctggctcacg
tcggctcgcctcgggtcgggtgtgcaggcgggctgggtggaggagtgcgcgtgtcccccg
ggctacaccggtcagttctgccagtcctgcgctcccggcttcaagcgggacgtccccttc
ggtggccccttcgtcgcctgcgtgccctgcgcctgcaaccagcacggggactgcgagccc
cgctcagggcagtgccggtgcttgcacaacacagaaggtccctcctgcgagcgctgcagc
cccgggttttatggcaaccccttcgtggggcgcttcgacgactgcaagccctgcccgtgc
ccctaccgctcgccctgcaccgaggtgcccggcagcagagaggtggtgtgcacccactgc
cccctggggcagagagggaaacgctgcgagctgtgcgacgacggttttttcggggacccc
ctgggacagaggggccccgtgcgtccctgcgccccctgccagtgtcacgggaacgtggac
ctcaacgccgtggggaactgcgacaccgagtccggccggtgcctgcgctgcctgcacaac
acgacgggcgagcactgccaggagtgtcggccgggcttctacggggatgcgctggccccc
agccccgccgggaagtgtgcgccttgcgattgcaaccccgatggctcagccccggggccg
gagggctgcgatcccagcacgggccagtgccgctgcctcccgcacgtgacgggcaggacc
tgcgggctctgccagcccggctactacgggctgctgcccaccgtgggctgcaagagctgc
gagtgccacccggcggggtcgcgggacagcgggtgccacgcgctgacggggcagtgctcc
tgccagctgggcgtcgcggggctgcgctgcgacagatgcgaccacggcttctttggattc
tctgctaagggctgtcgagcctgcaactgctccccgctgggcgccgtcacgccgcagtgc
cacgagaacagcacctgcgtctgccgccccggcttcgtgggctacaagtgcgaccagtgc
caggccaacttcttccccgaccctccgagctccggctgccagccgtgcccctcttgctac
gggctggtgaaggacggggctgaccggctgaaggcgaagctgcaggagatggaggaacgg
ctgcagaccccaggctgtgacgtccacccggggcagtccctggtgctgggagatgcgccc
cggggagacgggctgcccggcaggcacctcctgcaaggtgcccgggctgtgctctccgtg
caggtggggcggctggcgggggtgctgagcgccgcgcagggccgtctcagcaacgccagc
caggccagcggctgctccgaccacggacaccccaagacgtgcgtcctgctgtcggagatc
ggggccgtgctgcagtcggcgcagcgggaggtgctgcacgccgccgacaccctggctgcc
acggagattcctcaggaaatccccccgcagcccaccaactggagccgcgtggcgctggat
gcgcgggtgttggctgagaggcacggggacgctgtggcgcaggtggaggcgatggtcagg
agagcgctaaatgtgtccaaagccagccacgagctcctgcagagcctgctggaggggaga
gcagcatgggaggcacagcgcgagctggaggccgggtacgaggaaatccagcaggcgcag
gaggagctgggcgctggcatgctggaggtggcagcggaggccaggagggctcttgccacc
atccagcaggcaaacgcagacgtggctgagaagctcctgcaggtggctgctccagggcag
caggcactgctggcacaggctggagccctggtgcaggacctgggggcactggagcgggcg
gtgggcacgcaggagctgtcggcgcagcaagccatcgcggcatcccgcaccctggcagct
gggctgcgccgggacctgcaggggactcgcagcttcacgcagctgcaggaccgagctggc
actgcccgcagcctggccacctcggcagtctcacgaggaaaagctgccctctccggcacg
gagtccgtcctggccagcttggaaggcatgaggaaggtgctggggcatcggaagggccag
gctgccctgagcaggaggatggcgcttgtgcgggacaggacgatggtggaggcccagaag
aagatcaaacaggcagagaaaatgctgggaaactccttgtctgtctccaccacagccagg
aggacagctggggaggccgagcaagtcgctggggagagcgctaagagggcaagggctgtg
ctgcagggcagcaagcaggctcacaagcatgctgtgcagcttgccacacgtgtcaacaag
acccagcaggagctcgtccggcaggagcgtgtggctgaggagctcagggggggcctggag
gaagcagagcaggtggggacagaggtgagtgagatggcaaaaagcctccaggaagcccgg
ggctcgctgatggcggacatcaagaccctgaaggacctgctgagcagccttggcaacctg
gagcagggcacgcaggtggaggcagcgctgggagcagggaggctgcagctggagcggctg
cggctgcgcctggctgcgccgggagccctggccaagcggctcagccagctgcagcaggag
gcagcacagcagcaggagaagatccaggcggtcgagagcgacttggccgagatccgggct
gacaagaggaacctggaggacattttgcggagcctccccgagggctgctcagagtggcag
tga
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