Cygnus atratus (black swan): 118252287
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Entry
118252287 CDS
T09349
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118252287 (GAPVD1)
Membrane trafficking [BR:
cata04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118252287 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
118252287
NCBI-ProteinID:
XP_035411286
LinkDB
All DBs
Position
19:complement(1087510..1120353)
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AA seq
1461 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQGVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPVQQEKLFGEKGT
EKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRMKNNLAKFDKSCVAAFLDVVIDGRAVETPPMSSVNLLEGLSRTVVYMTYSQLTSLVGF
MRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
ATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQL
ADGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDHLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAV
VRPKVHYARPSHPPPDPPILEGAMGGNEARLPNFGSHALIPTDLEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPGWNRRPGNEERELPMPTTNTGTAVLVAASQSSSSSPSKDSSRGE
IEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDMVPDRYSTLQDDPS
PRLSAQAQAAEDILDKYRNAIKRTSPSEGALVNYDSGETTGDGESVHDSPRDEALQNMSA
DDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNE
IVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYL
TRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTA
ADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGD
ILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCI
LRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEE
SYWWMQFTAAVEFIKTIDDRK
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggatatacacacgctggctcatcacctcaagcaggaacgactgtatgtg
aactcagaaaagcaactgattcagaggctcaatgcggatgtactgaagacagctgaaaag
ctgtaccgcacagcatggatttccaagcagcaaagaattaatttggacagactgatcata
acaagtgctgaggcttctcctgctgaatgctgtcagcatgcaaaaatcctggaggacacg
cagtttgtggatggatacaagcagttgggatttcaggagactgcatatggagaattccta
aacagactgagagagaaccctaggcttattgcatcctgtctggttgccggagagaagctc
aaccaggacaacacgcagggcgtcatccacacagtcttcacctccatttacggcaactgc
atcatgcaggaggatgagagctacctcctccaggtccttcgctacttgatcgaatttgag
cttaaggagagtgacaaccctaggcggctgttgagacgaggtacttgtgcattcagcatc
ttattcaaacttttttctgaaggacttttttctgcaaaactttttcttactgcaacttta
cacgagccaatcatgcagcttctggttgaagacgaagaccacctggaaactgatccaaac
aaattaattgagagattctctccagtacaacaggaaaagttgtttggagagaaaggcacg
gaaaagttcaagcaaagagttcaagagatggtcgactccaatgaggccaaactggtgacc
ttggtgaacaaattcataggctatctcaaacaaaacacgtactgttttccacacagcttg
cgatggatcgtgtcacaaatgtacaaaacgctctcatgcgtagacaggctggaggtcgga
gaggtcagagcaatgtgcacggatctccttctagcatgtttcatctgtcctgcgattgtt
aacccagaacagtacgggataatttctgatgctcctataaacgaggtggcaagatttaac
ctgatgcaggtcgggagacttctgcagcaattggcaatgacaggttctgaagagggggat
ccacgtatgaagaacaaccttgctaaatttgacaaaagctgtgttgctgctttcctggac
gtagttattgatgggcgtgcagttgaaactcctccaatgtcttcagttaatctcctggag
gggctgagtagaacagtggtttacatgacatacagccagctaactagtctggttggtttt
atgcggaatgtgatgtcaagtgatcaacttaaggaagatcggatggctttggaaaacttg
ctagcaaacttgccccagaacaaaccagggaaaagcagcagccttgaaatgactccgtat
aataccccacagctctctcctgcaaccactccagctaacaaaaaaaatcgcttaccaata
gcaactcgtagcagaagtagatcaaatattctgatggatcagcatggggatcacgaagga
tcctcgcaggagactatcccagaagttcagccggaagaagtgctggtgatttctttggga
acaggtccacagattactccaggaatgatgtcagaaaatgaggtcttaaacatgcagctc
gcagatggcggacaaggagatgtccctgttgatgaaaacaaactccatggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttca
aatcgctccaactctgtatcatctttggatttagaaggagagtctgtatcagagcttggt
gcaggcccctctgggagcaatggtgttgaagccctgcagctgttagagcatgaacaagcc
acaactcaggataatcttgatgacaagctccgtaaatttgaaatccgtgatatgatgggg
ttgactgatgacagagatatatcagaaactgtcagcgaaacttggagtacagatgtcttg
ggtagcgactttgatccaaatattgatgaagaccatttgcaagaaattgcaggtgcagct
gcagagaacatgctaggcagcttgctgtgtttaccaggttcaggatctgtgttgcttgat
ccttgcacaggttcaaccatatcagaaaccacaagcgaggcctggagtgtggaagtatta
ccaagtgactcagaggccccagacctaaaacaggaagaaagactgcaagaactggaaagc
tgttctgggctgggtagcacatctgatgacacagatgtaagggaggtcagctctcgaccc
agtacaccaggcctcagcgttgtatcaggtattagtgcaacatctgaagatattcctaat
aagattgaggatctcaggtctgaatgtagctctgactttgggggaaaagattctgtgaca
agtcctgacatggatgaaacagcccatggggctagtcagttgacatctcctccttctcag
acagattctttgcttgcattgtttgaccctctgtcatcaaatgagggtgtatcagctgta
gtaaggcctaaagtacactatgcaagaccatctcacccaccaccagatccaccgattttg
gaaggagctatgggaggtaatgaggcccgattgccaaactttgggtctcacgctttaatt
ccaactgatctagaagcgttcaagcagaggcattcttacccagaaaggctagtccgcagc
aggagttcagatatagtgtcatcagttcggagacctatgagcgatcctgggtggaacaga
cgtcctggtaacgaggagagggaacttccaatgccaaccaccaacactgggacagccgtt
ctggtggctgcatctcagtcgtcgtcttcatctcccagtaaagactcctctaggggagag
attgaagagcgaaaagacagtgatgatgagaagtctgacagaaacaagccatggtggaga
aaacgttttgtgtctgccatgcccaaagctccaattccatttagaaagaaagaaaaacag
gaaaaagacaaagatgacatggtgcctgacagatactcaacacttcaagatgatcccagc
ccaaggctcagtgcacaggcgcaagctgcagaagatattctggataaatacaggaatgca
attaagcgaaccagtcctagtgaaggagctttagtaaactatgacagtggagagactaca
ggggatggtgagagcgtgcatgactctccacgtgatgaggctttgcaaaacatgtctgca
gatgatctaccagactctgcaagtcaagtagcccagccacaaagttctgctttctcctat
agggatgcaaagaagaaattgaggttggctctttgttcagcagattctgttgcctttcca
atgttgacacattcaacaaggaatggtctaccagatcacacagaccctgaagataatgaa
atagtgtgcttcttgaaagttcagctagctgaagctattaaccttcaagacaagaacttg
atggcccagctgcaagaaacaatgcgatgtgtaagccgctttgataacaggacctgtcga
aagctgctggcctctattgcagaggactataggaaaagagctccatatatcgcttattta
actcggtgtcgccaaggtctgcaaacaacacaagcacacttggaaaggctgttgcaaaga
gttttgcgagataaagaagtggccaacagatacttcactacagtatgtgtgaggttactg
ctcgagagcaaagaaaagaaaataagggagtttattcaagatttccagaaacttacggca
gcagatgataaaacagcccaagttgaagattttcttcagttcttatatggggcgatggct
caggatgccatatggcagaatgccagtgaagaacagcttcaggatgcacaattagctata
gagcgcagtgtgatgaatcgcattttcaagcttgcattctaccctaatcaggatggagat
attttgcgtgaccaggtccttcatgaacatatacaaaggctatctaaagtagtgactgca
aaccacaaagcacttcagatacctgaggtatatctccgggaggcaccatggccatctgca
cagtctgaaatccgcacaataagcgcttacaaaaccccccgagacaaagtacagtgtatc
ctgcgaatgtgttcaacaatcatgaacctgcttagtctggcaaatgaagattcagtacct
ggggcagatgattttgttcctgttctggtctttgttctcataaaggcaaatccaccttgc
ttgctgtccactgttcagtacattagtagtttctatgccaactgtttatctggagaagaa
tcttactggtggatgcagttcacagcagcagttgaattcattaagactattgatgatcgc
aagtaa
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integrated database retrieval system
