Cygnus atratus (black swan): 118252589
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Entry
118252589 CDS
T09349
Symbol
TTLL4
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin monoglutamylase TTLL4
KO
K16601
tubulin polyglutamylase TTLL4 [EC:
6.3.2.62
]
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cata03037
]
118252589 (TTLL4)
04812 Cytoskeleton proteins [BR:
cata04812
]
118252589 (TTLL4)
Enzymes [BR:
cata01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.62 beta-tubulin-glutamate ligase
118252589 (TTLL4)
Cilium and associated proteins [BR:
cata03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
118252589 (TTLL4)
Cytoskeleton proteins [BR:
cata04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylases
118252589 (TTLL4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTL
ATPgrasp_YheCD
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
118252589
NCBI-ProteinID:
XP_050567586
EnsemblRapid:
ENSACYG00000007157
LinkDB
All DBs
Position
6:30247273..30271046
Genome browser
AA seq
1109 aa
AA seq
DB search
MTVSLSPRVLWLYMASAGPQRCNLGPKQKSSXAPPAGTPPAERAQPRRAWLSAPQQAKPL
WALEGQHVSASQERSPPPAGIPLQQSSSLYPPSPCPTRPAERAHPSLALARPCPELCGSA
LLCRRSCLRADSCRFPFQSPQDTGSATGRAMSSVLMEPRLLPALPEEHKGSGVKGSALSS
ARQAASSYTPVLNNNPFLRPGSAQVPSLRSPEIKKLKNAPSFPAVSWPCSRDEGDCSPST
PVVQSSDQEQSCAPSLTLVPSSVTLRKERCSWPLGDAERRARSFSEKEPELSPGKAAQQL
AGQTATPSSFGREVRSPGRTNAGGVSNGNRWGHRIVAQLAPKETIAPLSLETGSRRLAGT
SSLTGTEGAVVCAKRVSLHLLASRAASPERGTGCRLLSTPLCGRERAVEPQHPAAVSHVA
AQMSAIRLEKEEKRPQAALPGKPDVAAGESLLEPSHPQDDVEEELPDGLDESCGTDEEED
SDSDASSVAGVSSNGSVALVSRKCIECLSQPTEDQEKVLKPALVHSLFPNVPPTIYFSTR
DERVEKLPWEQRKLLRWKMCTVTPNIVKQTIGRSHFRVSKKSNDWLGCWGHHMKSPSFRA
IREHQKLNHFPGSFQIGRKDRLWRNLLKMQTRCGKKEFNFFPQSFILPQDIKLLRKAWEE
GASQQKWIVKPPASARGIGIQVIHKWSQLPKRRPLLVQRYLHKPYLIGGRKFDLRIYVYV
TCYDPLRVYLFKDGLVRFASCKYSSAMKSLSNKFVHLTNYSVNKKNTEYKSNSDETACQG
HKWALKALWSYLTQKGVNSEAIWEKIKDIVIKTIIASEPYVNSLVKMYVRRPYCCHELFG
FDIMLDENLKPWILEVNISPSLHSNSPLDVSIKGQMIRDLLNLAGFVLPSTDSIASRPQT
RSDSACSLGSALKEKPRPASEHFTAEKMKKAYYLTQKVPDQDFYSSVLDILTPDDVRILV
ETEDEYSRRGQFERVFPTHISMRYLRFFEQPRYFNILVTQWEVKYYLNKHKGLELLKNWC
VKGYHTGAGTDLAQTWSLPKSFLLQKSSIQSNGFSKLEPGGRGKLLPPADEDLTRCLEPS
PAPSLPLTKHAAGADQKPASCLSDAALVL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtctcgctctcaccccgcgtgctatggctgtacatggcctctgcaggaccgcaa
cgctgtaacctgggccccaaacagaagagctccnnggcccccccagcgggcacccccccg
gcagagcgagcgcagccgcgccgggcctggctcagcgctcctcagcaggcgaaacccctc
tgggctttggaggggcagcatgtgagcgcttcgcaggagcgcagcccgccgcccgcaggg
atccctttgcagcagtccagctccctgtacccgccgtcgccatgccccacgcgccccgct
gaacgcgcccacccgagcctggccctggcccggccctgcccggagctgtgtgggagcgcc
ctgctctgtcggcgctcctgcctgagagccgactcctgcaggtttcctttccaaagcccc
caggacaccggctctgccacgggaagggcgatgtcttccgtgctgatggagccccgcctg
ctgcctgcgctgcccgaggagcacaaggggtctggggtcaagggctctgccctcagctcg
gctaggcaggctgccagctcctacacaccggtgctcaacaacaaccccttcctacggcca
ggcagtgctcaagtgccttcgctgcggtcaccggagatcaagaagctgaagaacgctccc
agcttccctgctgtctcgtggccctgctccagggacgagggggactgctcccccagcacc
cctgtggtgcaaagcagcgaccaggagcaaagctgtgccccctccctgaccctcgtgccc
agcagcgtgaccctcaggaaggagcggtgctcctggccgctgggggacgccgagaggaga
gcgcgcagcttcagcgagaaggagccagagctcagccctggaaaggctgcgcagcagctg
gccggacagaccgccacccccagcagctttggacgcgaagttagaagccctggcaggacg
aatgcgggtggggtgtccaacgggaacaggtgggggcatcgcatcgtagcgcagctcgcc
ccgaaggaaaccatcgctcccctgagcttggagacgggcagccgccgccttgccggtacc
tcgagccttacaggcaccgagggtgccgttgtgtgcgctaaacgggtcagccttcatctc
ctggcctcccgcgctgcctctcccgagcgcggcaccggctgccggctcctgagcacgccg
ctgtgtggcagggagcgggcggtggagcctcagcaccctgctgccgtctcccacgtggca
gctcagatgtccgccatcaggctggagaaggaggagaaacggccccaggctgcgctccca
gggaagcctgacgtcgctgctggagagtcgctgctggagccgagccatccccaggacgat
gtggaggaagaacttcccgatggcctggatgagagctgtggcacagacgaggaagaggac
agtgactcggatgcttcctctgtcgctggcgtgtcatctaacggctctgtggctctcgta
tccaggaaatgcatcgagtgtctgtcccagcccacagaggatcaggagaaggtgctcaaa
ccagctcttgtccacagtttattccctaatgtgcctccaaccatctacttcagtacgcgg
gatgagagagtggaaaagctgccttgggagcagaggaagctgctgcggtggaaaatgtgc
acagtcacgccgaacatcgtgaagcaaaccattggcaggtctcacttcagagtcagcaaa
aagagcaatgactggctgggctgctggggccaccacatgaaatcccccagcttcagagcc
atccgggagcaccagaagctaaaccacttccctggttcatttcaaattgggagaaaagac
cgtctgtggcgcaacctgttgaagatgcagactcgctgtggaaagaaagagtttaacttc
ttcccccagtccttcatcctgccccaggacatcaaattactcaggaaagcatgggaggaa
ggagctagccaacagaaatggattgtgaaaccaccagcatcagcaagaggcattggcatt
caggttatccacaaatggagccagctccccaaaaggagaccactgctggtgcagaggtac
ctgcacaaaccctacctcattggcgggaggaagtttgacctgaggatctacgtttatgtc
acttgctacgatcccctcagggtctacctgttcaaggacggattggttcgcttcgctagc
tgcaagtactcctccgcgatgaagagcctcagcaacaagttcgtgcacttgaccaattac
agcgtgaacaagaagaacacggagtataagtccaattcggatgagactgcttgtcaggga
cacaaatgggcactcaaagctctctggagttacctgacccagaaaggagttaacagcgag
gccatctgggagaagattaaggacatcgttatcaaaaccatcattgcatctgagccctac
gtgaacagcctggtgaagatgtacgtgcggcggccgtattgttgccatgagctctttggg
tttgatatcatgctggatgaaaacctcaagccctggatcttagaggtcaacatttcccca
agcctccactccaactcccctctggatgtgagcatcaagggccagatgatccgggacctg
ctcaacctcgctggctttgttctgcccagcacggacagcatagcctcaaggccgcagact
agaagtgactccgcgtgcagtctgggcagtgcgttgaaggagaagcccaggccagcctct
gagcatttcacagcagagaagatgaagaaggcctattacttgacacagaaggtgcctgac
caggatttttattcttctgtcttggacatcttgaccccagacgatgttcgcattctcgtg
gaaacagaggacgagtattcccggcgcgggcagtttgagcgggtgttccccacccacatc
tccatgcggtatctgcgcttcttcgagcagcctcgttacttcaacatcctggtgacccag
tgggaggtcaaatactacttgaataaacacaaaggtctggagctgctcaagaactggtgt
gtcaaagggtaccacactggggcggggacggatctggcccagacgtggtccttaccaaag
tccttcctcctccagaaaagcagcattcagtcaaatggcttcagcaaactggaaccgggt
ggacggggcaaactcctgcctccagccgacgaggacctcacgagatgcctggagcccagc
cccgctccgagcttacctctcaccaagcacgctgctggagccgaccagaagccggccagc
tgcctctcagacgctgccctggtgctgtga
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integrated database retrieval system
