Cygnus atratus (black swan): 118252913
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Entry
118252913 CDS
T09349
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04142
Lysosome
cata04144
Endocytosis
cata05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118252913 (CLTCL1)
04142 Lysosome
118252913 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118252913 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118252913 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cata04147
]
118252913 (CLTCL1)
Membrane trafficking [BR:
cata04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
118252913 (CLTCL1)
Exosome [BR:
cata04147
]
Exosomal proteins
Proteins found in most exosomes
118252913 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
118252913
NCBI-ProteinID:
XP_035412614
LinkDB
All DBs
Position
17:complement(5959797..5997995)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTASHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPDQGLQFSQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDKL
DASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYSAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccattcgcttccaggagcatttccagctccaaaatttgggcatt
aacccagcaaacattggattcagcaccctaacaatggaatctgacaaattcatctgcatc
agggagaaagtgggagagcaggcgcaagtagtgataattgacatgagcgacccaacaaca
cccatcagacgtccgatttctgctgaaagtgccatcatgaatccagcctctaaagtaatt
gcgctaaaagctgggaaaacactacagatctttaacattgagatgaaaagtaaaatgaaa
gcccacaccatggcggaggaggtgatcttctggaaatggatatctgtgaatacggttgcc
ttggtaacagagacagcagtctaccactggagcatggagggagaatctcaaccccaaaag
atgtttgacaggcatgctagtcttgcgggctgccaaatcatcaattacagaactgatgaa
caccaaaaatggctgttgctcataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctgtactcagttgatagaaaagtctcccaacctatagagggccatgcagcagct
ttcgcagaattcaaaatagagggaaatgccaaaccttccactctcttttgttttgctgtg
aggagtcctgcagggggcaagcttcacataattgaagtgggtcagccagctactgggaat
cagccatttgttaagaaagctgttgatgtgtttttcccaccggaggcgcagacagacttt
cctgtggcaatgcagattggaattaagcatggtgttatctacctgatcacgaagtatggt
tatattcacatgtatgacttggagtctggagtttgcatctacatgaaccgtattagtgct
gacactatttttgtcacagcttctcatgaacctacctcaggcattattggtgtcaacaaa
aaaggacaggtgctttccgtatgtgttgaggaagacaacatagtgaactacgctacaaac
gttctccagaatcctgatctgggtctgcgtatggctatacgtagtaatctagctggcgca
gaggaattatttgccagaaagttcaacacattgtttgctcaaggaagctatgcagatgct
gctaaagtagctgcatctgcaccaaagggaattctacgtaccagtgatacaatcaggaag
ttccagagtgtaccagctcagcctgggcaggcctctcccctgctccagtactttgggata
ttgcttgaccagggacagctgaacaagtttgagtctctagagctctgtcgccctgttcta
cagcaaggccgcaagcagcttctggagaagtggctgaaggaagacaagctggagtgctca
gaggagttgggagacttggtgaagacagctgaccctacccttgcactcagcgtctatctt
cgtgccaatgtgccaaacaaagtgatacagtgcttcgctgaaactggtcaattccagaaa
atagtgctgtatgctaaaaaggttggctataccccagactggatcttcttgctgagaagt
gtgatgagagtcagccctgatcaaggcctgcagttctctcagatgctggtacaggatgag
gagccactggctaacattaaccagattgtggatgtgttcatggagaacagtctcattcag
caatgcacgtcctttctgttggatgctttgaaaaataaccgccctgcagaaggccacctt
cagactcggctgctggaaatgaatttaattcatgccccacaggttgcagatgccatcctt
ggaaaccaaatgtttacacactatgatcgtgctcatattgcccagctgtgtgaaaaggca
ggcttgctccagcgagctttggaacactacaccgatctctatgatattaaacgtgctgtt
gttcatactcatctcttgaatcccgagtggcttgtgaacttctttggctctctctctgtt
gaagactcggtggagtgcctgcgtgctatgctgtcagccaacattaggcaaaatctacag
ctttgtgtgcaggttgcttctaagtaccatgaacagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagctacgaaggactgttctatttcttgggttccattgtaaac
ttcagccaggatccagatgttcacttcaagtacatccaggcagcttgcaagacaggtcag
ataaaggaagtagaaagaatctgccgtgaaagtaactgctataacccagaacgggtgaag
aactttctgaaggaggcaaagctgacagaccaacttcctctgatcattgtctgtgatcga
tttgactttgttcatgacctggtgctctacttatatcgcaataacctgcagaagtatata
gagatatatgtacagaaggtgaatcccagccgtataccagcagtggttggagggcttctt
gatgtggattgttctgaagatgtaattaagaacttgatcatggtggttagaggccagttc
tcaacagatgagttggtggctgaagtggaaaaaagaaatcggcttaagttgctgttgcca
tggctcgaatcaaggattcacgaaggctgtgaagaacctgcgactcataatgccttggcc
aaaatctacattgatagtaataataatccagagcggttccttcgtgagaatccttactat
gacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgttgca
tatgagagggggcaatgtgatctggaactcataaaggtctgcaatgagaactcactgttt
aagagtgaggctcgctatctagtacgcaggaaggaccctgaactctgggcaaatgtttta
gaagaaaacaacccattcaggcggcagcttattgaccaggttgtccaaacagctttatca
gagacgcaggatccagaggaggtttctgtcactgtgaaagctttcatgactgcagacctg
cctaatgaattaattgagttattggaaaaaattgtcttggataattctgtattcagtgaa
cacaggaacctccagaatctgctgatcctgactgccatcaaggctgaccgcactcgtgtg
atggagtatattaatcgactggataactatgatgccccagatattgcaaacattgccatc
agtaatgaactatatgaagaagcctttgctatattcagaaaatttgatgttaatacttca
gcaatccaggtgctgattgaacacattggcaatttagaccgtgcttatgaatttgcagag
agatgtaatgaaccagcagtatggagccaactagccagagcacagctgcagaaggacttg
gtgaaagaagccattgactcctacataaaggcagatgatccgtctgcctacatggaagtt
gttcaagcagctaatagaaatgataactgggaggacctagtcaagttcttacagatggcc
aggaagaaggctagagagtcttatgtagagacggaacttatttttgccttggcaaaaact
aatcgtctctcagaactggaggagtttattagtggccctaataatgcccatatacagcag
gttggtgatcgctgttatgaagaagggatgtatgaagcagcaaaactactctataacaac
gtgtctaactttgctcgcctggcatctaccttggtacaccttggagagtatcaggcagca
gtggacagtggccgcaaagccaacagcacaaggacttggaaggaggtatgttttgcctgt
gtggatggaaaagaattccgcttggcacagatatgtggcttacacatagtcattcatgct
gatgaacttgaagagctgattagttactatcaggatcgtggctactttgaagaactgatt
gctcttttggaagctgctttgggtctagagcgtgctcacatggggatgtttactgaactt
gccatcttatactctaaattcaagcctcagaaaatgagggaacatttggagctcttttgg
tctcgagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
ctcgtattcctttatgacaaatatgaggagtatgacaatgcaataattaccatgatgaat
catcccaccgatgcttggaaagaagggcagtttaaagacataattgccaaggtggccaac
gtggagctgtattacaaagccttgcaattctacttggactacaaacctctgctgatcaat
gatcttctgcttgtattatctccgcgactggatcatacgaggacagtcaattttttctca
aaggttaatcagctacttctagtaaagccttacctgcgttcagtccagaaccacaacaac
aaaggagttaatgaagctctaaacaaccttttaacagaggaggaagactatcagggtttg
agagcttccattgatgcctatgacaactttgataacataacattggctcagcgtctggaa
aagcatgaactaattgaatttaggcgtattgcagcatacttgtataagggcaacaaccgc
tggaaacagagcgtggagctatgcaagaaagaccgtctgtataaggatgctatgcagtat
gctgcagagtccaaagatgcagaactagctgagaagctgcttcagtggttcctggaagaa
ggcaagcaggagtgttttgcagcctgccttttcacgtgttatgacttgctgcacccagat
gtagtccttgagttggcatggaggcataacatcatggactttgcaatgccttatttcatc
caagtgatgagagagtaccttaccaaagttgatgggctgttctataaggtggataaactt
gatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccactccaatagta
tttggccagcagttgatgttaacagcaggccccagtgcagtacctccccaggcaaacttc
ccatacggatactcagcaccaggattcacccagccacctgtttatggtttcaacatgtaa
DBGET
integrated database retrieval system
