Cygnus atratus (black swan): 118252926
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Entry
118252926 CDS
T09349
Symbol
DEPDC5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X4
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
118252926 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cata04131
]
118252926 (DEPDC5)
Membrane trafficking [BR:
cata04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
118252926 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
118252926
NCBI-ProteinID:
XP_035412638
LinkDB
All DBs
Position
17:4719582..4766204
Genome browser
AA seq
1572 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKSIDEFPETHRA
SVRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPPGYNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRLGDDYNIPHWINHSFYTSKSQLLCNSFT
PRIKLAGRKPLTEKAKNSRDASLGAPKDAENALPIQVDYDGYDAQVFRLPGPSRAQRCTT
FSRSVRERESRTRKSSSSYDVSCSPSLQSRTLPPEEVRSQASDDSSLGKISNILMIPRPH
LHQYEVSSSLGYTSTRDVLENMLESQQRDSSAPGRFHVGSAESMLHIRPGGYTPQRALIN
PFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGNGQQDLTHSSAELL
ELAYHEATGRHTSSRHPGDGASFLGFSGTEEYSNGLSGSNGAGMNLKPQNKDSLEDAVSN
SPDPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLPEADIDRRDE
EGVQMTAQQVFEEFICQRLMQGYQIIVQSKPQKPATTVPPPLSSSPLYSRGLVSRNRPEE
EDQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDSEFVSCWVEF
SHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKRIMEGEVHCDV
YGDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGSAMKGLQIAGPIPTHSLEQ
PGPPIGKKGTSALSALLEMEASQKTLGEQQAAMLSGKSSGQPSDSGSIAITPTYMDSPRK
VSIDQSVPATSDGNTLINTGQSADRGNAQNLGSSQNVADPGYVTAGTAEGCSQQCSASSL
TSSSTLIEILEAMKHPTTGIQLLSEQKGLSPCCFISAEVVHWLVNNVEGVQTQAMAIDIM
QKMLEEQLIVHASGEALRTFIYGFYFYKIVVDKEPDRVGMQQPAMWHTAAMDDFSAFQRK
WFEVAFVAEELLHSEIPAFFLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQR
TVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKATSC
GFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNVSCLLKEGSEHLFDGFEPETYWDRMHLL
QEAIAYRFGFVQDKYSASAFNFPAENKPQYIHVTGTVFLQLPYSKRKFSCGQQRRRRNST
SSTNQNMFCEERIGYNWAYNTMLTKTWRSSATGDEKFADRLLKDFTDFCWNKDSRLVLFW
TDCLDKMHASAP
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaggtgtacaagctcgtcatacacaagaagggttttggaggcagtgat
gatgaactggtggtgaatcctaaagtatttcttcaaatcaagctgggagatgttgtggaa
attgcacatcccaatgatgaatacagccccctgctcctacaagtgaagtcactgaaggaa
gatttacagaaagaaactataagcgtggatcagactgttgcacaggtgttccggcttcgg
ccataccaggatgtccatgtgaatgttgttgacccaaaggaggtgaccttggacttggtg
gagctgacttttaaagatcaatatattgggcgtggggatatgtggcgactgaagaaaagt
ttggtcagcacatgtgcatatgtcacccaaaaggtggaatttgcaggtatcagggcacaa
gcaggtgaactgtgggttaagagtgagaaagtcacttgtggatacatcagtgaggataca
cgggtggtcttccgctccacttctgccatggtttatatttttatccagatgagctgtgaa
atgtgggattttgatatctatggggacctgtactttgagaaagctgtgaatggtttcctt
gctgatctcttcacaaaatggaaggagaagaattgcagccatgaagtgacagttgttcta
ttttctagaaccttttacgaagcaaaatctatagatgagtttcctgaaacacatcgtgca
tcggttcggcaggatcatgagggaagattttatgaagatttttacaaagttgtagttcag
aatgagagacgagaagagtggacctcattgcttgtgaccattaaaaagcttttcatccag
tatcctgtgctggtacgactagagcaagcagagggctttcctccaggttacaattctaca
tcagcacaagggaactacctggaggccataaatctttcattcaatgtgtttgacaagcat
tatataaaccggaactttgatcggactggccagatgtccgtggttatcacacctggtgta
ggggtgtttgaagtcgatcgcctccttatgattctaaccaaacagcggatgatagacaat
gggattggtgtggacttggtctgcatgggagaacaaccactgcatgctgtaccactcttt
aagcttcataatcgctgtggacctggagattccaggctgggtgacgactacaatattccg
cactggataaaccatagtttctacacatccaaaagccagctcctatgtaacagcttcact
ccgcggatcaagctggcagggagaaaaccactgactgagaaagcaaaaaatagccgagat
gcctcattaggggctccaaaagatgctgagaatgccctgcctatccaggttgattatgat
ggctatgatgcccaggtgttcagactgccaggcccatccagagcccagcgctgcaccact
ttcagcaggtctgtgagggagagagaaagtcgtacacgaaagagctctagttcctatgat
gtctcatgcagcccttctctccagagccgcactttacctccagaggaggtgaggagccag
gcttccgatgacagctccctgggcaagatctccaacatcctgatgatcccacggcctcat
ctgcaccagtatgaagtcagcagctctttgggctataccagcaccagagatgtccttgag
aacatgctggagtctcagcaacgtgactccagcgcccctgggaggttccacgttggcagt
gcagaatccatgctgcacattcggcctgggggatatacgccccagcgggcgctgatcaac
ccatttgccccatcccgcatgcctatgaaacttacatctaacaggaggcgctggatgcac
acttttcctgtgggtccatcaggagaagctatccagatccatcatcaaactcgtcagaat
atggcagaaatgcagggcaatgggcagcaggatttgacacattcctctgctgaactgctt
gagctggcttaccatgaggcaactggcagacataccagttctcggcatccaggtgacggt
gcttccttcctgggcttcagtggaacagaagagtattcaaatggtctgtctggcagcaat
ggtgcagggatgaacctcaagcctcagaataaggattcattggaagatgctgtctctaat
tctccagatccaatgccaggcttctgttgtacagttggagtggattggaaatctctcact
actccggcatgtctccctcttaccacggactacttccccgaccgtcagagtctgcagaat
gattacaccgagggttgttacgatctccttccggaggccgacattgacaggagagatgag
gaaggagtgcagatgacagcccaacaggtgtttgaggagttcatttgtcagcgtctcatg
caaggctatcaaattattgtgcaatccaaaccacagaaaccagccacaactgtgccaccc
ccactcagcagcagtcccctttacagtcgaggtcttgtatcaagaaatcggcctgaggaa
gaagaccagtactggctgagcatgggccgtactttccacaaagtaacattaaaagacaaa
ataattactgtgactcgatacctgccaaagtatccatatgaatctgctcagataaactac
acttacagcttgtgcccctcacactctgactctgaatttgtctcttgctgggtagaattt
tcccacgagagactggaagagtacaagtggaattacttggatcagtatatctgctctgct
ggttcggaggatttcagcctcatcgaatcactgaaattttggaggactcgctttctcctt
ctgcctgcctgcatcagtgccacaaagcgcattatggaaggagaagtgcactgtgatgtg
tacggagacaagccccgttctgatgaggaagagtggcagctcctagatggattcattcgc
tttgtggaaggtttgaaccgcattcgtcgacgccatcgatctgatcgaatgattcgaaaa
gggtctgccatgaaaggcttgcagattgctggtccaattcccacccactctctggagcag
cctgggcctcccattgggaagaaaggaacctcagcactctctgctctgctggagatggaa
gccagtcagaagactctgggggagcagcaagcagcaatgctttctggaaaaagctcaggt
cagccttcggatagcgggagcattgctatcacaccaacctatatggacagccctcgtaag
gtctctatagatcaatcagttcctgcaacctcagatggtaacaccttgataaacacaggg
cagtcagccgacaggggcaacgctcagaacttgggaagttcccagaacgtagcagaccca
ggatatgtcacagctggcactgcagagggctgctcccagcagtgttcagcaagctctctg
acttcctcctccaccttgatagagattcttgaagccatgaaacatcccactacagggata
caactgctctctgaacagaagggcctctctccgtgctgtttcatcagtgcagaagttgta
cactggctggtgaataatgtggaaggtgtgcaaacccaagccatggcgattgacataatg
cagaaaatgctggaagagcagctgattgtccatgcatccggagaagctttacgaaccttt
atttatggcttttatttttacaagattgttgtggacaaagaacctgaccgagtgggcatg
cagcagcctgccatgtggcacacagctgctatggatgacttctccgccttccagaggaaa
tggtttgaggtggcgtttgtggcagaagagctcctgcactcggaaatcccagcgtttttc
ctgccctggctgcccagccgcccagcctcctatgcaagtaggcacagttcctttagccgc
agtttcggaggacggagccaggcagctgcactattagctgccacggtgcctgaacagcgg
acagtgacgctcgatgtggatgtgaataaccgcactgaccgtttggagtggtgcagctgt
tattaccatggcaatttctccttgaacgctgcctttgaaatcaagttacactggatggca
gtgactgcagctgttctttttgagatggttcagggctggcatcgtaaagccacatcctgt
ggtttcttgctagtcccagtcttggaaggcccatttgcattgcccagttacttgtatgga
gacccacttcgagctcagttgttcatcccactcaatgttagctgcttgttgaaggagggt
agtgagcatttgtttgatggctttgaaccagagacatactgggaccgtatgcacctcctc
caggaagcaatagcatacagattcggatttgtgcaagataaatattcggcttctgcattc
aactttccagctgagaacaagccccagtatattcatgtcacagggacggtgtttctgcag
ctgccatattcaaagcggaaattttcttgtgggcagcagcgacgccggcgcaactccact
agctccaccaaccagaacatgttttgtgaagagcgcattggctacaactgggcttacaac
accatgctgacgaaaacgtggcggtctagtgccactggggatgagaaatttgctgatcgg
ttgctgaaagactttacagatttttgctggaacaaagatagccggcttgtgttgttctgg
actgactgcctagataagatgcacgctagtgcaccatga
DBGET
integrated database retrieval system
