Cygnus atratus (black swan): 118252995
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Entry
118252995 CDS
T09349
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03030
DNA replication
cata03410
Base excision repair
cata03420
Nucleotide excision repair
cata03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118252995 (RFC5)
03410 Base excision repair
118252995 (RFC5)
03420 Nucleotide excision repair
118252995 (RFC5)
03430 Mismatch repair
118252995 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cata03032
]
118252995 (RFC5)
03036 Chromosome and associated proteins [BR:
cata03036
]
118252995 (RFC5)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118252995 (RFC5)
DNA replication proteins [BR:
cata03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118252995 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
118252995 (RFC5)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118252995 (RFC5)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118252995 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
118252995 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_22
AAA_24
AAA_11
AAA_assoc_2
AAA_14
DEAD
RuvB_N
DUF815
ResIII
AAA_5
AAA_30
AAA_19
DNAX_ATPase_lid
PhoH
AAA_7
TIP49
TniB
ATPase_2
nSTAND3
Mg_chelatase
Thioredoxin_6
AAA_25
Gp44_lid
bpMoxR
AAA_3
NPHP3_N
UBA_Rad5
Motif
Other DBs
NCBI-GeneID:
118252995
NCBI-ProteinID:
XP_035412804
LinkDB
All DBs
Position
17:complement(2030020..2032915)
Genome browser
AA seq
329 aa
AA seq
DB search
MAAPGGRNLPWVEKYRPRELSELVSHRDILSTIQRFISEDRLPHLLLYGPPGTGKTSTIL
ACARQLYREREFSSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVVQ
EEGVDVSEDGMKALVTLSSGDMRRALNILQSTAMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSTAYRKITELKTLKGLALQDILTEIHLFVHRVDFPPSVRIQLLIKMADIEYR
LAAGTSEKVQLSSLVAAFQVTRDLIVAEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgggcgggaggaacctgccctgggtggagaagtaccggccgcgggagctc
tccgagctggtgtcgcaccgggacatcctcagcaccatccagcggttcatcagcgaggac
cggctgccccacctcctcctctatggcccccccggcaccggcaagacctccaccatcctg
gcctgcgcacggcagctctaccgggagcgggagttcagctccatggtgttggagctgaac
gcctcggacgaccggggaatcgacatcgtcagagggcccatcctgagcttcgccagcacc
aggaccatcttcaagaaaggcttcaagctcgtcatcctggacgaagccgacgccatgacc
caagacgcccagaacgccctgaggcgagtgatcgagaagttcaccgaaaacacccgcttc
tgcctcatctgcaactacctctccaagatcatccccgcgctgcagtcccgctgcacccgc
ttccgcttcgggcccctcaccccggagctgatggtgccccggctgcagcacgtcgtacag
gaggagggggtagatgtgagcgaggacgggatgaaggcgctggtgaccctctcgagcggc
gacatgcgccgagccctgaacatcctgcagagcaccgccatggccttcgggaaggtgacg
gaggagaacgtctacacctgcacggggcatcccctcaagtccgacatcgccaacatcctc
gactggatgctcaaccaggacttctccactgcctatcgcaaaatcacagagctgaagacg
ctgaagggcttggccctgcaggacatcctgaccgagatccacctgtttgtgcacagagtc
gacttcccaccctcggtccgcatccagctgctgatcaaaatggcagacatcgagtaccgg
ctggctgctggcacgagcgagaaggttcagctgagctccctcgtcgcggctttccaagtc
accagggacctgatcgtggctgaagcctga
DBGET
integrated database retrieval system