Cygnus atratus (black swan): 118253018
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Entry
118253018 CDS
T09349
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03440
Homologous recombination
cata03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118253018 (TOP3B)
03460 Fanconi anemia pathway
118253018 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cata03032
]
118253018 (TOP3B)
03400 DNA repair and recombination proteins [BR:
cata03400
]
118253018 (TOP3B)
Enzymes [BR:
cata01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
118253018 (TOP3B)
DNA replication proteins [BR:
cata03032
]
Eukaryotic type
DNA Topoisomerases
118253018 (TOP3B)
DNA repair and recombination proteins [BR:
cata03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
118253018 (TOP3B)
FA (Fanconi anemia) pathway
118253018 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
118253018
NCBI-ProteinID:
XP_050570146
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All DBs
Position
17:6424449..6438958
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AA seq
862 aa
AA seq
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MKTVLMVAEKPSLAQSIAKILSRGNMSSRKGLNGACSVHEYTGSFIGQSAHFKMTSVCGH
VMTLDFIGKYNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDCIVLWLDCDK
EGENICFEVLDAVLPVMNKPRSSERTIYRAKFSSITDTDICNAMNHLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNPEKESSLTLDWDRVRVFDREIAQMFLNITKMAKEAKVESVSKKEKVKQRPLA
LNTVEMLRVASAALGMGPQHAMQIAERLYMQGYISYPRTETTHYPENFDLKGCLRQQANN
PYWAETVKALLSEGINRPRKGHDAGDHPPITPMKAATEAELGGDGWRLYEYITRHFIATV
SADCKYLQTTISFSIGPERFTCIGKVVTSPGFTEIMPWHSIPLEESLPHCEKGDLFPIGE
IKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDSTSGPKWKMACNKCNVIVHFFENAHKVRVSPETCDLCDAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGRRQGRGRGKGRR
PGGRPNPKKPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgtgctgatggtcgcggagaagccttctctggctcagtcgatcgccaagatc
ctctcgaggggaaacatgtcctctcgcaaaggactgaatggtgcatgctctgtgcatgag
tacactgggtcatttatcggacagagcgcccatttcaagatgacatctgtgtgtggtcat
gtcatgactttggatttcataggaaaatacaacagctgggacaaggtggatccagcagaa
ctttttagtaaagctcccacagaaaagaaagaagctaatcccaaactgaccatggtgaag
tttttacaggtggagggaagaggctgtgattgcattgtcttgtggttggactgtgataag
gaaggagaaaacatctgttttgaagttcttgatgctgttcttcctgttatgaacaaacct
cgtagcagcgaaaggacaatttatagagctaaattcagttccattactgacacagacatc
tgcaatgccatgaatcatttgggagaacccaatcgcaatgaagctctgtcagtggatgcc
cgccaggagctggaccttagaattggctgtgcatttacaagatttcagactaagtatttt
caggggaaatatggaaatttagacagctccctcatctcctttgggccatgtcagacgcca
acacttggattctgtgttgaaaggcatgacaaaatccagtcatttaagcctgagacttac
tgggtgctgcaagctaaagtgaatcctgaaaaagaaagttctctcactttggattgggat
agagtgagggtgtttgatcgtgagattgctcaaatgttcctgaatataacgaagatggca
aaagaagcaaaggtagaatctgtgagtaaaaaagagaaggtgaagcagagaccactggct
ctgaacacggtagaaatgctacgagtggccagtgctgctttaggaatgggtccgcaacat
gccatgcaaatagcagagcgtctttatatgcagggttatattagctaccctcgaacagaa
actacccattatccagaaaactttgacttgaaaggatgtttgagacagcaagccaataat
ccctactgggcagaaactgtaaaagcattgctatcagaaggcattaatcgtccaaggaaa
ggccatgatgcaggggaccatcctcccatcactccaatgaaagctgcaacagaagcagaa
ttgggtggagatggatggcgactatatgagtatataactaggcattttattgccactgta
agcgctgattgcaagtacctacaaaccaccatttctttcagtatcggccctgaaaggttt
acctgtattggaaaagtggtaacttcaccagggttcacagaaattatgccttggcacagc
ataccattagaagagagccttccgcactgtgagaaaggagatcttttcccaattggtgaa
ataaaattgctggaaaagcaaaccagtcctcctgattacctaacagaagcagaacttatc
actctgatggaaaagcatggcattggaactgatgcaagtattccagtccacatcaacaac
atttgccagcggaactatgtcacagtagagagtggtcggagactaaagcctacaaatctt
ggaattgttctggttcatggttattacaaaatagatgcagagttagttcttcctacaatt
cgcagtgctgtggaaaagcaactcaacttaatagctctgggtaaagcaaattaccatcag
gtcctggagcacacccttgacatcttcaaaaggaaatttcactattttgtggattctatt
gcaggtatggatgagctgatggaagtgtctttttcacccttagctgccacaggtaaacct
ctttcccgctgtggcaaatgccatcgtttcatgaagtatattcaggcgaaaccaagtcgt
ctgcactgctctcattgtgatgacacctacagtctcccacagaatggtacaattaaactc
tacaaagagttgcgttgccccctggatgactttgagctggtgctgtggtcttctggatcc
agaggaaagagctaccctctctgtccatactgttacaaccatcctcccttcagggacatg
aaaaaaggaatgggctgtaatgaatgcacccaccccacatgccagcattctcttagcatg
cttggaattgggcagtgcgttgaatgtgagaatggggttctggtgctagactcgacatca
ggtcccaagtggaagatggcctgcaacaaatgcaacgtgatcgtgcacttctttgagaat
gcccacaaagtccgagtgtcaccagagacgtgtgatttgtgtgatgcagcccttgtggat
gtagattttaacaaagccaaatctcctctgcctggtgatgagacccagcattcaggctgc
gtattctgtgaccctgtgtttcaagacctggtggagctgaaacacgcagccatgaggcac
cccatgcatcgtgggggacaaggaagaaggcagggtcgaggaagaggtaaaggccggagg
cctgggggaagacccaatccaaagaaacccaaggacaaaatggcagctctggctgcttac
tttgtataa
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