Cygnus atratus (black swan): 118253063
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Entry
118253063 CDS
T09349
Symbol
NALCN
Name
(RefSeq) sodium leak channel NALCN isoform X1
KO
K21863
sodium leak channel non-selective protein
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118253063 (NALCN)
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
118253063 (NALCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
FAM165
Motif
Other DBs
NCBI-GeneID:
118253063
NCBI-ProteinID:
XP_035412948
LinkDB
All DBs
Position
1:151491506..151716393
Genome browser
AA seq
1738 aa
AA seq
DB search
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPKT
FEHYPPLQYVTFALDTLLMFLYTAEMIAKMHIRGIVKGDSSYVKDRWCVFDGFMVFCLWV
SLVLQVFEIAEIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVTDDTQRGNVTWNNLAIPDTHCSRELEEGYQCP
PGFKCMDLEDLGLSRQELGYSGFNEIGTSIFTVYEAASQEGWVFLMYRAIDSFPRWRSYF
YFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGSRSSTTSTATTQMFHEDAAGGWQ
LVAVDVNKPQGRAPACLQKMMRSSVFHMFILSMVAVDVIVAASNYYKGENFKRQYDEFYL
AEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHIYPDLYHSQFTYFQVL
RVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTF
PRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILD
NLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRE
SFMKQFIDRQQQDTSCLLRRLPSASSSSCDHSKRSAIEENKYIDQKLRKSVFSIRARNLL
EKETAINKILRACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGK
SLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIV
GREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMIIVTICSC
ISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIF
IYLVSLIFLCWMPQNVPAKSGAQLLMVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLV
SILLLTLMLVFASFGVQLFAGKLAKCNDPHIISREDCHGIFRINVSVSKNLNLKLRPGEK
KPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFV
FLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFR
AKMYDITQHPFFKRTIAVLVLAQSVLLSVKWDAADPVTVPLATMSVVFTFIFVLEVTMKI
IAMSPSGFWQSRRNRYDLLVTSLGVIWVILHFALLNAYTYMMGACVIVFRFFSICGKHVT
LKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAIT
VLFRIVTGEDWNKIMHDCMVQPPFCTPDNSTYWKTDCGNYAGALMYFCSFYVIIAYIMLN
LLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTFRVKFLLRLLRGR
LEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLE
YTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIETTQPS
EDMNAINQDNSAQPETSSQQQLLSPTLSDRGGYRQDSADAGKPQRKFGQWRLPSAPKPIS
HSVSSVNLRFGGRSTMKSVVCKMNPMSDAASCGSEVKKWWTRQLTVESDESGEDLLDI
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagaggaaacagagttcaagggtggaggcccaaccagttacagattttggtcct
gatgaatctttgtcagacaatgcagatattctgtggattaacaaaccatgggtacactca
ttactacgaatctgtgccataatcagtgttatttctgtttgtatgaacaccccaaagacc
ttcgagcattatcctcctctccagtatgtgacatttgctctcgatactctattgatgttc
ctttatactgcagagatgatagcaaaaatgcatatccgtggcatagttaagggtgatagc
tcctatgtaaaggatcgttggtgtgtgtttgatggattcatggtcttttgtctttgggtg
tccctggttttacaggtgtttgaaattgctgaaatagttgatcagatgtcaccttggggc
atgttgcggattccaagaccactcattatgattcgagcattccggatatattttcgtttt
gagctgccaagaaccaggataacaaatatcttaaagcgttctggagagcaaatctggagc
gtttcaattttccttctcttttttctcctcctgtatggaatcctgggggtgcagatgttt
ggaacttttacataccactgcgtgactgatgacacacagcgaggaaacgtaacctggaat
aatttagctatcccagacacccactgttccagagagctagaagaaggttaccagtgccca
cctggatttaaatgcatggaccttgaagatctgggactaagcaggcaagagctgggctac
agtggctttaatgagataggcacaagcatatttactgtttatgaagctgcttctcaggaa
ggctgggtgttccttatgtatcgagcaatcgacagctttccccgatggcgttcatatttc
tatttcatcaccttaattttctttctggcctggcttgtgaagaatgttttcatcgcagtc
atcattgaaacatttgcagaaattagagtgcagtttcagcagatgtggggatccagaagc
agtaccacctcaactgccaccacccagatgtttcatgaagatgctgctggaggttggcag
cttgtggctgttgatgtgaataaaccccagggcagagctcctgcatgtctacagaaaatg
atgaggtcatcagtgtttcatatgttcatactaagcatggtggctgtagatgtgattgtt
gctgctagtaactactacaaaggagaaaatttcaagagacagtacgatgaattttaccta
gctgaggttgcttttacagttctgtttgatttagaagctctcctgaagatctggtgtttg
ggtttcacaggatacatcagctcatctcttcacaaatttgagttactacttgtaattgga
accactcttcacatttatccagacctctatcactctcagtttacatatttccaggttctt
agagtagttcggcttataaagatttctcctgctttggaggattttgtgtataagatattt
ggaccaggaaaaaaacttgggagtttggttgtattcactgccagccttttgattgtaatg
tcagcgatcagtttacagatgttttgctttgtggaagaactggatagatttacaaccttt
ccacgggcattcatgtcaatgtttcagattctcacacaggaaggatgggtagatgtcatg
gatcagacactgaatgctgtaggacatatgtgggcaccagtagttgccatttattttata
ctatatcatctttttgctacactgattctactcagtttgtttgttgctgttattctggac
aacttggaacttgatgaagatctgaagaaacttaaacaactgaagcaaagtgaagcaaat
gcagatacaaaagagaagcttccactgcgtctacgcatctttgaaaaatttccaaacagg
ccacaaatggtgaaaatctccaagcttccttcagatttcacagttccaaaaataagggaa
agttttatgaagcagtttattgatcgccagcaacaagataccagctgtctgctgcgaaga
cttccttcagcgtcttcttcctcatgtgaccactctaaaagatcagcaattgaagaaaac
aaatatattgatcaaaagctccgtaaatctgttttcagcatcagagcaagaaatcttctt
gaaaaagagacagcaatcaataaaattttaagggcctgcactagacaacgcatgctgagt
gggtcctttgaggggcagcctgcaaaggaaaggtcaatacttagtgtccagcatcatata
cgacaagaacgcaggtcactaagacatggttccaacagccagcgaatcagtagaggaaag
tctcttgaaacgttgactcaagatcactccaacacagtgagatacagaaatgcacagaga
gaagacagtgagataaaaatgatccaagaaaaaaaagaacaagctgaaatgaaaaggaaa
gtccaagaagaggagcttcgagagaatcatccatatttcgacaaaccacttttcattgtt
ggtcgtgagcacagattcaggaatttctgccgagttgttgtacgagctcgctttaacgct
tctaaaacagatccggttactggagctgtgaaaaataccaaataccatcagctttatgac
ttgctgggtttggttacttacctggactgggtcatgatcattgttactatatgctcctgc
atttccatgatgtttgagtccccgtttagaagagttatgcatgctccaacactccagatt
gctgaatatgtttttgtaatattcatgagcattgagcttaatctgaagattatggcagat
ggcctgttttttacaccaacagctgtcattagagactttggaggagttatggacatattc
atatatcttgtgagtttgatattcctgtgctggatgcctcagaatgtccctgccaaatcc
ggagctcagctcttaatggtactccgctgcctccgacctcttcgaatattcaaactggtc
cctcagatgaggaaagttgtacgagagctgtttagtggatttaaagaaatctttttggtt
tctattcttttgctgacattaatgcttgtttttgcaagctttggagtacagctatttgct
ggaaaactggctaaatgcaatgatcctcacatcatctctagggaagattgtcatggcatc
ttcagaataaatgtaagtgtttccaaaaatctcaatttaaagctaagacctggagagaaa
aagcctggattttgggtgccacgagtctgggcaaatcctcggaattttaattttgataat
gtggggaatgcaatgctggcactattcgaagttctttcattaaaaggctgggtggaagtc
agagatgttattattcatcgcgttgggccgatccatggaatctatatacatgtttttgta
ttccttggctgcatgattggactgacccttttcgttggagttgtcatcgctaatttcaat
gaaaacaaggggacagctttactgactgtagatcagagacgatgggaagatctgaaaagc
agactgaagatagcacaacctcttcatctcccacctcgtccggataacgatggctttaga
gctaagatgtatgatataactcagcatccattttttaagagaactattgctgtgcttgtt
ctggcccagtcagtgctgttatcagttaagtgggatgctgcagatccagtgactgtgcct
ttagcaacgatgtctgttgttttcaccttcatttttgtccttgaggtcacaatgaagatt
attgccatgtcaccttctggcttctggcaaagcagaagaaatcggtatgatctcttggtg
acatctcttggagttatatgggtgatacttcactttgccttgctgaatgcgtacacatac
atgatgggggcatgcgtaattgtcttcaggtttttctcaatttgtgggaagcatgtgaca
ctgaaaatgctactcctgactgtggttgtcagcatgtacaagagtttcttcatcatagtg
ggaatgttcttactgctcctttgttatgcttttgctggagtggttttatttggtacagtg
aaatacggagagaacattaatagacatgcaaatttttcgtcggctggcaaggctattact
gtactcttcagaatagttactggagaagactggaacaaaattatgcacgactgcatggtt
cagcctccattttgtacaccagataatagcacctactggaaaacagactgtggaaattat
gctggtgctcttatgtatttctgttcattttatgtcatcattgcatacatcatgctaaat
ttgcttgttgctatcattgtggagaatttctcattgttttactcaactgaagaagaccaa
cttttaagttataatgatcttaggcattttcaaattatttggaacatggttgatgacaag
agagagggagtaattcctaccttccgagtgaaatttctgctgagacttctgcgtggcagg
ctggaggtggatcttgacaaggacaagctgttgttcaagcacatgtgctatgaaatggaa
cggctgcataatggtggtgatgtcactttccacgatgtgctgagcatgctttcatatagg
tctgtggatatcagaaaaagtcttcaactggaagagctgcttgctagggaacaactggaa
tataccatagaagaggaggtggccaaacagaccatacgcatgtggctgaagaagtgctta
aagcgaattagagcaaaacaacaacagtcgtgcagcattatccatagtctacgagagagt
caacagcaggagttgagccgatttctgaatcctcccagcattgagacaacacagccaagc
gaagatatgaatgctattaatcaagataacagcgcgcagccagagacaagtagccagcag
cagctccttagcccaacgctttctgacagaggtggctatcgacaagactctgcagatgct
gggaaacctcagcggaaatttggacagtggcgtttgccatcagcccccaaaccaataagc
cattctgtgtcttcagtcaaccttcgctttggtggacgttcaactatgaaatctgtcgta
tgcaaaatgaatcccatgtctgatgctgcatcttgtggatcagaagtcaagaagtggtgg
acaagacaattaactgtggagagcgatgaaagtggagaggacctacttgatatctga
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integrated database retrieval system
