Cygnus atratus (black swan): 118253080
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Entry
118253080 CDS
T09349
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118253080 (SOX1)
Transcription factors [BR:
cata03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118253080 (SOX1)
SSDB
Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118253080
NCBI-ProteinID:
XP_035412981
LinkDB
All DBs
Position
1
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AA seq
374 aa
AA seq
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MYSMMMETDLHSPGGAQAPGSLSGQSGAGGGGGGGGGGGGGSKGGQDRVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRP
RRKTKTLLKKDKYSLAGGLLGAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTAGGGY
AHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGGGGHPHHPHPHHPHHPHNPQPMH
RYDMGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGAL
GSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHYQS
ASTGVNGTVPLTHI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccccggcggagcccaggcccccggc
agcctctcggggcagagcggagcgggaggaggcggcggcggcggcggcggcggcggcggg
ggcagcaaaggcggccaggaccgggtgaagcgccccatgaacgccttcatggtgtggtcg
cggggccagcggcggaagatggcccaggagaaccccaagatgcacaactcggagatcagc
aagcgcctgggcgccgagtggaaggtgatgtcggaggccgagaagcggcccttcatcgac
gaggcgaagcggctgcgggcgctgcacatgaaggagcacccggattataaataccggccc
cggcggaagaccaagacgctgctcaagaaggacaagtactcgctggccggggggctgctg
ggcgccggctcggccgggggcggcccggcgggcgtcggcgtgggcatgggcgtcggcgtc
agccccggcggcgtcgggcagcgcctggagagccccggcggcacggccggcggcggctac
gcgcacatgaacggctgggccaacggcgcctacccgggctcggtggcggcggcggcggcg
gcggcggcgatgatgcaggaggcgcagctcgcctacggccagcacccgggcggcgggggg
cacccgcaccacccgcacccgcaccacccgcaccacccgcacaacccgcagcccatgcac
cgctacgacatgggcgcgctgcagtacagccccatctccaactcgcagggctacatgagc
gcctcgccctcgggctacggcgccctgccctacggctcccagccccaccagaactcggcg
gcggcggcggcggcggcggcggcggcggcggccgcctcctcgggggcgctgggcgcgctg
ggctcgctggtgaagtcggagcccagcgtgagcccgcccgtcacctcgcactcgcgggcc
ccgtgccccggggacctgcgggagatgatcagtatgtacttaccggccggggaaggcggc
gatccggcggccgccgccgcccagagccggctccactccctgccccagcactaccagagc
gccagcacgggggtcaacggcaccgtccccttgacgcacatctga
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