Cygnus atratus (black swan): 118253145
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Entry
118253145 CDS
T09349
Symbol
TBL1XR1
Name
(RefSeq) F-box-like/WD repeat-containing protein TBL1XR1 isoform X1
KO
K04508
transducin (beta)-like 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118253145 (TBL1XR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cata03036
]
118253145 (TBL1XR1)
Chromosome and associated proteins [BR:
cata03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
118253145 (TBL1XR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
NBCH_WD40
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_SCAP
LisH
Beta-prop_DCAF12
Beta-prop_EIPR1
WD_LRWD1
B-prop_COPA_B_2nd
Beta-prop_HPS5
WD40_like
RMC1_N
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_NWD2_C
PD40
Motif
Other DBs
NCBI-GeneID:
118253145
NCBI-ProteinID:
XP_035413117
LinkDB
All DBs
Position
9:19600992..19712897
Genome browser
AA seq
513 aa
AA seq
DB search
MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAATNQQ
GSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPIS
DLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLA
TGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAK
QQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTG
NLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFD
STVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR
GTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtataagcagtgatgaggttaacttcctggtatatagatacttacaagagtcaggg
ttttcccattcagcatttacctttggtatagagagccatatcagccagtccaatataaac
ggtgctctggtgccaccagctgctttgatttccatcatccagaaaggtctgcagtatgta
gaggcagaagtcagtattaatgaggatggtaccttgtttgatggtaggccgatagagtct
ctctcactgatagatgcagtgatgcctgatgtggtacagacaagacaacaggcctacaga
gataaacttgcacaacagcaggcagcagctgctgcagccgcagctgcaactaaccaacag
ggatcagcaaaaaatggtgaaaatactgcaaatggggaagagaacggagcacatactata
gcaaataatcacacagatatgatggaagtagatggagatgttgaaatccctcccaacaaa
gcagtggtactgcgtggccatgaatctgaagtattcatctgtgcctggaatcccattagt
gaccttttggcctcaggatctggagattcaacagcacggatatggaacctcagtgaaaac
agcacaagcggctcaacgcagctggtacttcgacactgtatacgagaaggagggcaggat
gtaccgagcaacaaagacgtgacatcactggactggaacagtgaaggtacacttctagca
actgggtcttacgatggctttgcaaggatatggactaaagatggtaatcttgccagcacc
ttagggcaacataaaggtcctatatttgcgttaaaatggaacaagaaaggaaacttcatt
ttaagtgcaggagtggacaagaccacaattatttgggatgcccacactggtgaagccaag
cagcagtttccatttcattctgcaccagcattagatgttgattggcagagcaacaacaca
tttgcttcttgcagtacagacatgtgtattcatgtctgtaaactaggacaagataggccc
atcaaaaccttccagggtcacacaaatgaagtaaacgcaatcaaatgggatccaactggt
aatcttctggcatcctgttctgatgatatgactctaaagatctggagtatgaaacaagac
agttgtgtccatgacttgcaagcacacaacaaagaaatttatactatcaaatggagtcct
acaggaccaggaacaaataatccaaatgccaatcttatgttagcaagtgcatcctttgat
tctactgttaggttatgggatgttgacagaggaatttgtattcatactctgacaaaacat
caagaacctgtgtacagtgtagctttcagtcctgatggcaggtacctggccagtggctcc
tttgataaatgtgtacacatctggaatacgcagacaggtgccctagttcacagttatcgg
ggaacaggagggatttttgaggtttgctggaatgcagcaggagacaaagttggagcaagt
gcttcagatggttcagtttgtgtattagacctacggaaatag
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