KEGG   Cygnus atratus (black swan): 118253249
Entry
118253249         CDS       T09349                                 
Symbol
PLOD1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
cata  Cygnus atratus (black swan)
Pathway
cata00310  Lysine degradation
cata01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cata00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    118253249 (PLOD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cata04147]
    118253249 (PLOD1)
Enzymes [BR:cata01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     118253249 (PLOD1)
Exosome [BR:cata04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118253249 (PLOD1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 118253249
NCBI-ProteinID: XP_035413297
LinkDB
Position
21:5651527..5669827
AA seq 730 aa
MVPPAVLLPWVVLALLGVEGGGASKQEENLLVLTVATKQTEGFRRFRRSAQFFNYKVQVL
GLDEEWKGGDDKKPAGGGQKVRLLKAALKQYADDADLIILFIESYDVLFASGPTELLKKF
KQAKSKVVFSAENYIYPDRKLEAKYPQVRDGKRFLGSGGFIGYAPNLKKLVEEWKGQDDD
SDQLFYTNVFLDPEKRENINISLDHRSRIFQNLNGALDEVVLKFENARVRARNLLYDTLP
VVIHGNGPTKLQLNYLGNYIPQIWTFETGCTVCDEGLRSLTGFKDEALPVILIGIFIEQP
TPFLSQFFSRLRKLHYPKQRIQLFIHNHEEHHLMQVDSFVKEHGKEYLAIKVIGPDDEME
NAEARNLGMDLCRKDPDCDYYFSLDAEIVLKNTETLRILIEQNKLVIAPLVSRHEKLWSN
FWGALSPDGYYARSEDYVDIVQRRRVGLWNVPYISSVYMVKASTLRSELDQGDLFHSGKL
DADMAFCHNIRNQGVFMYLTNRHQFGHILSLENYQTNHLHNDLWQIFSNPEDWREKYIHE
NYTAALKGKLVEMPCPDVYWFPIFTDTACDELVEEMEHYGKWSTGDNTDSRIQGGYENVP
TIDIHMNQIGFEREWYKFLLDYIAPITEKLYPGYYTKTQFELAFVVRYKPDEQPSLMPHH
DASTFTINIALNRVGIDYEGGGCRFLRYNCSIRAPRKGWTLMHPGRLTHYHEGLPTTKGT
RYIAVSFLDP
NT seq 2193 nt   +upstreamnt  +downstreamnt
atggtgcccccggcggtgctgctgccctgggtggtgctggcgctgctcggggtggagggt
ggcggtgcctccaagcaggaagaaaacctgctggttcttactgttgccaccaagcagact
gagggattccgacgctttagaagatcagcacaattcttcaactacaaagtccaggtactt
ggacttgatgaggaatggaagggtggagacgacaagaagccagccggaggtgggcagaag
gtccgtctcttgaaggcagctttgaagcagtatgcagatgatgcagacttgatcatcctt
ttcatagaaagctatgatgtactctttgcttcgggccccacagaactgttgaagaagttc
aaacaagccaagagcaaggtggtcttctcggcagagaactacatctatcctgacagaaag
ttggaagccaagtatcctcaggtgcgagatggaaagcgcttcctgggttctggaggcttc
ataggttatgcgccaaacctgaaaaaacttgtagaggagtggaaaggacaggacgatgac
agtgaccagctcttctatacgaatgtctttttggatccagaaaaaagagaaaatatcaac
atcagtctagaccatagaagccggatcttccaaaacctaaatggagcattagatgaggtg
gttctgaagtttgaaaacgcacgagtgagagcaagaaacttgttatatgacactctgcct
gtggtgattcatggaaatggacccaccaagctgcagctgaactacctgggaaactacatt
cctcaaatatggacgtttgagactggctgcactgtgtgtgatgaaggtctgcgaagccta
acaggttttaaggatgaggcactgccagtgattctgattggcattttcattgagcagccc
actccattcctttcccagtttttctcacggcttcgtaaacttcattacccaaagcaacga
atccaactcttcattcacaaccatgaggagcatcacttgatgcaggtggactcttttgtt
aaggagcatggcaaagaatatctcgccatcaaagtgattggaccagatgatgagatggag
aatgctgaggcgcgtaacttgggcatggatttgtgcagaaaggatcctgactgtgactat
tattttagcttggatgctgaaatagttctgaagaacacagagactctaaggatcctcatt
gaacagaacaagctagtgattgccccactggtaagtcgtcatgagaagttgtggtcaaat
ttctggggagcgctgagccctgatggatactatgcccgctcagaagattatgtggatatt
gttcaaaggcggagggttgggctttggaatgttccctacatcagcagtgtttacatggtt
aaagctagcactctgcgatcggagcttgaccagggagatctcttccacagtggcaagctg
gatgctgacatggctttctgccacaacatacggaatcagggagtctttatgtacttgaca
aatcgacatcagtttggacacatactgtccctggagaattatcaaacaaatcacctccac
aatgatctctggcaaatattcagcaaccctgaggactggagagaaaagtacatccatgaa
aactatacagcagctctgaaagggaaattggtagaaatgccctgcccagatgtttactgg
ttccctatattcaccgacactgcctgtgatgagctggtggaagaaatggaacattatggc
aagtggtccacaggtgacaatacggacagtagaatacaaggaggctatgaaaatgtccca
actattgatatccacatgaaccaaataggctttgaaagagaatggtataagtttcttctg
gactatattgcacccatcactgagaaactgtacccaggatactataccaagactcagttt
gagctagcctttgtagtccgctacaaacccgatgagcagccctctctaatgccccatcac
gacgcttccacctttaccattaacattgctctgaaccgagttggaatagactatgaggga
ggaggctgtcggttcctgcgctacaactgctcaattcgagctccacggaaagggtggacc
ctcatgcatccaggacgcctgacccactatcatgaaggtcttccaaccaccaaaggaacc
cgttatatcgcagtgtcctttcttgacccctag

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