Cygnus atratus (black swan): 118253368
Help
Entry
118253368 CDS
T09349
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04120
Ubiquitin mediated proteolysis
cata04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118253368 (UBE4B)
04120 Ubiquitin mediated proteolysis
118253368 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118253368 (UBE4B)
Enzymes [BR:
cata01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118253368 (UBE4B)
Ubiquitin system [BR:
cata04121
]
Ubiquitin ligases (E3)
U-box type E3
118253368 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Keratin_2_head
Motif
Other DBs
NCBI-GeneID:
118253368
NCBI-ProteinID:
XP_035413542
LinkDB
All DBs
Position
21:4627705..4667791
Genome browser
AA seq
1210 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRETPPGPPAVAPAPGPSHSLGLNVHSM
TPATSPIGASGQAREKLPKAFPEQSSLQLEFNTAYCPHDYTQQPRSKGVAHRSQSSEGVS
SLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQVDVDSGIENMEVDENDRREKRSLT
DKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFLNSLSAQFKQNPKEVFSDFKDLIG
QILMEVLMMSTQSRDENPFASLTATSQPIAATARSPDRSLILNTGSNPGTSPMFCNVGSF
GSSSLSSMGGSGSSSVSDSCNDHFTIESCKETEMLNYLIECFDRVGIEERKAPKMCSQPT
VSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRTTYQD
EEVFKQIFIPILQGLALASKECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVSLPLW
LPKSLSTGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQSLQHY
LELARQELFKILHSILLNGETREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLW
VLQQLSTKIKLETVDPMYVFHPRCRIDLPTDETRVKATMEDVAAWIAELYSDPSPFSEPK
FPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREM
LKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLMLRILDPAYPNIKLPLTPE
VPKVFAALPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVA
KLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTI
RYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQ
EEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPE
LGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIA
DDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEF
RDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQA
WMRDKQNADH
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggacgagatccgtcgaaggcgccttgctcggttggcaggcgga
ccatcttcccagccgactacaccccttacgtcaccgcagagagagaccccgcctggacca
cctgcagtagcaccagccccggggccatcccatagtctaggcctaaatgtccatagcatg
accccagctacctctccaattggtgcatcagggcaggccagagaaaagctaccgaaagca
tttcctgagcaaagctcattgcagttggaatttaacactgcatattgtcctcatgattat
acacagcaacccagaagcaaaggagtagcccaccgaagccagagcagcgaaggagtgagt
tcactcagcagttctccatctaacagccttgaaacacaatctcaatctctctctcggtct
cagagcatggatattgatagtgtctcctgtgagaaaagcatgtcccaggtagatgtggat
tcaggaattgaaaacatggaggttgatgagaatgatcgcagagagaagaggagtctgaca
gataaggaacctctgtctgggtctgaagtatctgaggagcaagctttacagctggtctgt
aagatcttcagagtctcttggaaggaccgagacagagatgttatattcctgaattccctc
tctgcccagtttaagcagaacccaaaagaagtgttttcagattttaaagacttgatcgga
cagattttgatggaagtgctgatgatgtccacccagtcaagggatgaaaacccatttgcc
agtctgacagctacgtcacagccaattgctgcaactgcccggtctcctgacagaagccta
attttaaacacgggctccaacccaggaaccagccctatgttctgtaatgtgggctccttt
ggttccagttcattatccagtatgggaggctctggcagctcaagcgtttctgattcctgc
aacgaccacttcaccattgaaagctgtaaggagacagagatgctgaactacctcattgag
tgttttgaccgagttggaatagaggagagaaaagcaccaaagatgtgtagccagccgaca
gtcagtcagttactgagcaacattcgatcacagtgcatttcacatgctgctttggtgcta
cagggatccttaacacaaccaaggtcattgcagcagcagtctttgctggtaccctatatg
ctgtgtaggaatctcccatttggtttcatccaagaattggtgagaacaacttatcaggat
gaagaggtgttcaaacagatctttatccccatcttacaaggcctggctctagcttccaaa
gagtgctcccttgatagtgacaattttaaatacccccttatggcactatgtgaactttgt
gaaatcaagtttgggaaaacacaccccatgtgcagtttggttgtctctttacccttgtgg
ctgcctaaatcattaagcacaggtgcgggacgagaactgcaaagactttcctatcttgga
gccttcttcagtctctctgtctttgctgaagatgataacaaagtagttgagaagtacttc
tcagggcctgccatcacgcttgaaaacacccgggttgttagccagtccttgcaacattac
ctggaattagcaaggcaagaactgttcaagatattacatagtattttactgaatggtgaa
actcgagaagcagctctcagttacatggcagctgttgtcaatgccaacatgaagaaggca
caaatgcagacagatgatcgtttggtatctacagatggttttatgctcaacttcctatgg
gtactgcagcaactaagtacgaagataaagctggaaacggttgatcccatgtacgtattt
catcccaggtgtcgtattgacctcccaacagatgagacaagagtgaaagcaacaatggag
gatgttgcagcctggattgctgagctttacagtgatccgtctccattttctgagccgaaa
tttccaacagaatgtttcttcttaaccctgcatgcccatcatctctccatcctgccaagc
tgccgtcggtacatacgtagactgcgggccatcagggaactcaacaggactgttgaagat
cttaaaaacaatgaaagtcagtggaaggattctcctttggctactaggcatcgagaaatg
ctaaaacgctgcaagacacagcttaagaaactggtgaggtgcaaggcttgtgcagatgct
ggtttgctggatgagaacttcctcaggagatgtctgaatttttatggcatggttattcag
ctgatgcttcgcattctcgaccctgcctatcccaacataaagctgcctttaactcctgaa
gttccaaaagtatttgcagcattgcctgagttttatgtggaagatgttgctgaattttta
ttttttattgtacaatatgctcctcaggtgctttatgagccctgtactcaggacatagtc
atgttccttgttgtgatgctgtgcaaccagaactacatccgaaatccttatttagtagcc
aagctggtagaggtgatgttcatgacaaatccagctgttcagccccggacccagaaattc
tttgaaatgatcgagaatcatcctctctccactaaattgttagtcccctccttgatgaag
ttttacacagatgttgaacatactggagcaactagtgagttctacgacaagtttacaatc
cgctaccacatcagcaccattttcaaaagcctctggcagaatatagctcaccatggtaca
tttatggaagagttcaactctgggaagcagtttgttcgctacatcaacatgctgataaat
gacacaactttcttgctggatgagagtctggagtccctaaaacgtatccatgaagtgcaa
gaggagatgaagaataaagaacaatgggacctgctgcccagggatcagcagcaggctcgg
cagtcacagcttgctcaggatgagcgtgtctctcgttcatatctcgccctggcaacagaa
actgttgatatgttccatatccttaccaagcaggttcaaaagccttttctcagacctgaa
cttggaccacgattggctgctatgttgaactttaacttgcagcaactatgtggcccgaag
tgccgtgacctaaaagttgaaaaccctgagaaatatgggtttgaaccaaagaagctgttg
gaccaactgactgatatttatctacagctagattgtgctcgttttgctaaagcaattgct
gatgatcagaggtcctacagcaaagagctctttgaggaggtcatatcaaagatgagaaag
gctggaatcaagtcaaccatagcaatagaaaaattcaaactgctggcagagaaagtggag
gaaattgttgctaagaatgctcgtgcagaaattgattacagcgatgctccggatgaattc
agagatccactcatggacactctgatgactgatcctgtgaggttgccatctggaactatt
atggacaggtcaatcatcctgaggcatctgttgaactcctccaccgatcctttcaatcgt
cagacactgacagaaaatatgctggaaccagtgccagaacttaaagagcaaattcaagcc
tggatgagagacaagcagaatgctgaccattaa
DBGET
integrated database retrieval system
