Cygnus atratus (black swan): 118253475
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Entry
118253475 CDS
T09349
Symbol
TLR3
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04217
Necroptosis
cata04620
Toll-like receptor signaling pathway
cata05164
Influenza A
cata05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118253475 (TLR3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118253475 (TLR3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118253475 (TLR3)
05168 Herpes simplex virus 1 infection
118253475 (TLR3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cata04054
]
118253475 (TLR3)
04090 CD molecules [BR:
cata04090
]
118253475 (TLR3)
Pattern recognition receptors [BR:
cata04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
118253475 (TLR3)
CD molecules [BR:
cata04090
]
Proteins
118253475 (TLR3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Tlr3_TMD
TIR
LRR_9
TIR_2
LRRNT
SPMIP8
Motif
Other DBs
NCBI-GeneID:
118253475
NCBI-ProteinID:
XP_035413778
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All DBs
Position
4:complement(20107818..20117409)
Genome browser
AA seq
895 aa
AA seq
DB search
MGSDILCWNSLSLRLVSVCLLCASVGKQCQIRNTMADCSHLKLTQIPSDLPNNITVLDIS
HNQLKKLCPANLTKYSKLVYLNAGYNIISKLQPELCKNLPLLQILVLEHNQLHELPDGAF
ASCTNLTELNLGYNIIDVKNDPFKTLENLNILDLTHNHLKSANLGLEQQLKNLRELVLCG
NQITELKKEDLSFLSNTSLSSLDLSSNPLKEFHTGCLRAIGNLFGLILNNVELGENCTKK
LCTELSNTAIQNLSLSHVKLSYINKTTFQGLQGTNLTVLNLSKNSLSVIEDDSFQWLSNL
EYLNLKDNIIRVSSRSFHGLSSIKHLNLINSLTGKIEDFSFHWLYHLEYLLMDNNNFPRI
TTNMFTGLNNLKYLSLSNCNINLQRITNTTFLSLANSSLQVLNLTKTRISTIESGAFSCL
GHLKILDLGLNEISQELTGHEFKGLNNIQYIYLSYNKNLTLRSESFSFVPSLRMLMLRKV
GCSNLAISPSPFHPLQNLTVLDVSNNNIANIKEDLFDGLHKLDILNLQHNNLARLWKHAN
PGGPVLFLKDLPNLHILNLKSNGFDEIPVQVFKGLFQLKYLDLGSNNLNLLPATLFDDQT
SLNSLNLQKNLITSVEEEVFGPAFKNLRKLEMDSNPFDCTCESIAWFASWLNATQAYIPG
LQSQYICNTPPKYHGTLVLHFDSSACKDSAPFKLLFVITTTVVMLLIFIVLLIHFEGWRI
AFYWNISVNRILGFKELDRLQEEYDYDAYIIHSRHDKNWVLKNFISLEKNKQFEVRFCLE
ERDFEAGISEFEAIINSIRRSRKIIFVVTEHLLKDPWCKKFKVYHAVQQAIEQSRDSIIL
VFLHDIQDYKLNHALCLRRGMFRSRCILKWPAQKERVNAFHQQLVMALKSNSKAR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgatattctttgttggaacagcttatctttgagactggtgtctgtctgcttg
ctgtgtgcatcggttggaaaacaatgtcaaatcagaaatacaatggcagactgcagtcac
ctaaaactgactcaaattccttctgatctcccaaacaatataactgttttggacatttct
cataatcagctgaaaaaactgtgtcctgcaaatctgaccaagtacagcaagctggtttac
ttaaatgcaggatacaacatcatctctaaactgcaaccagaactatgcaaaaatttgccc
ctgttgcaaattttggtgctagaacataatcaattgcatgagctccctgatggtgcattt
gcttcctgcaccaacctgactgagctcaatctaggatacaacataatagatgtaaaaaat
gatcctttcaaaaccctggagaacttgaatattttggatctaactcataatcacttgaag
tcagcaaatttaggattggaacagcagctgaagaacctccgtgagcttgtgctgtgtgga
aatcaaatcactgagttaaaaaaggaagacctcagttttcttagcaacacttcattgagt
agtcttgatttgtcatcgaatcccctgaaagagtttcacacaggatgtttacgtgcaatt
ggaaatctgtttggccttatactgaacaatgttgaacttggtgaaaattgcacaaagaaa
ctttgtacagaattatcaaacacagcaattcagaacctctcactgagccatgtgaagctt
tcatacattaacaagacaactttccagggactgcaaggaacaaatctcacagttttaaac
ctttccaaaaattctctttctgtgatagaagacgactcttttcagtggctttcaaattta
gagtacttaaacctgaaggataacattattcgtgtatcttcacgttcatttcatggattg
tccagcatcaaacatctgaatctgataaattcactcactgggaaaattgaagatttttcc
ttccactggttataccacctggagtaccttttaatggataacaacaattttccacgaatc
actactaatatgttcacaggactgaacaaccttaaatacctgagtctttctaactgcaac
ataaacttacaaagaataactaatacaacatttttatcacttgctaattccagcttgcag
gttctcaacctcacaaaaacaagaatctctacaatagaaagtggggcattttcctgcttg
ggacacctgaaaattctcgatcttggtcttaatgaaattagtcaagagctcacaggtcat
gagtttaaaggtctcaataatatacagtatatttatctttcctataacaaaaacttgact
ttgcgaagtgaatcattctcttttgttccaagccttagaatgctcatgctaaggaaggta
ggttgcagtaatctggcaatttctccttcaccttttcatcctctacaaaatctgactgtc
ctggatgtcagcaataacaacatagcaaacataaaggaagatttgtttgatggacttcac
aaacttgatattctgaatttgcagcacaacaatttagctcggctttggaaacatgcaaat
ccgggaggccctgttctttttttaaaagaccttcccaacttgcatattctaaatttaaaa
tcaaatgggtttgatgagattccagttcaggttttcaagggtctgtttcagttaaaatat
ttggatttaggatcaaataatttgaatctgcttccggcaactttatttgatgaccaaacc
tctctgaattcattgaaccttcagaaaaatctaataacctcagttgaagaagaagtgttt
ggcccagctttcaagaacttgagaaagctagagatggattccaatccatttgattgcacc
tgtgaaagtattgcttggtttgctagttggcttaatgcgacccaagcatatatacctgga
ttgcagtctcagtacatttgcaacactccgcctaagtatcatggtactctggtgttgcat
tttgatagctcagcctgcaaagacagcgctccatttaaacttctgtttgtgatcactact
acagttgtgatgctactcatttttattgttcttctcatccattttgaagggtggagaata
gctttctactggaacatttcagtaaatcgaatacttggttttaaagaacttgatagacta
caggaagagtatgattatgatgcttacattattcattcaagacacgacaagaattgggtg
ttgaagaatttcatctctctggaaaaaaataagcaatttgaagttaggttttgtttagaa
gaacgggactttgaagcaggcatatcagaatttgaagccataattaacagtataagaagg
agcaggaagattatttttgttgtgactgagcatctcttaaaggatccctggtgcaagaag
tttaaggtgtatcatgctgttcagcaagctattgaacaaagtcgggactccatcatattg
gtctttcttcatgacatccaagattacaagttgaatcatgcactttgcttgagaagagga
atgttcagatctcgctgcatcttgaagtggccagcccagaaagaaagagtcaatgcattt
catcagcaattagtgatggcacttaaatctaatagtaaagcacggtga
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