Cygnus atratus (black swan): 118253622
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Entry
118253622 CDS
T09349
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04810
Regulation of actin cytoskeleton
cata05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118253622 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118253622 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cata03019
]
118253622 (CYFIP1)
Messenger RNA biogenesis [BR:
cata03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118253622 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
118253622 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
118253622
NCBI-ProteinID:
XP_035414044
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Position
1:137668896..137737860
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AA seq
1257 aa
AA seq
DB search
MRCKMTAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGI
ARYIEQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLE
PEVTKLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKN
MKCSVKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIVGYEE
LLADIVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLAKID
KFFKQLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDH
MRFISELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKL
VHPTDKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAI
RHTIYAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALRGE
KDPKSGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFH
RESFFYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETK
EASMMEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKA
MAGSLLLDKRLRSECKNQGASIQLLQSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAM
YRSMELAIGRFESEDLTSIVELDGLIEINKMTHKLLSRYMTLDSFDAMFREANHNVSAPY
GRITLHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLYGSKALNL
AYSSIYSNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVM
PKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSL
EEVCDLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAR
EGDLLTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQF
VYCIPVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFDVLDFCYHLLKVQKHDGKDEVI
KNVPLKKMVERIRKFQILNDEIIAILDKYLKSGDGESTPVEHVRCFQPPIHQSLASN
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcaaaatgactgctcaagtaacactggaggatgccttgtccaatgtggatctc
ttggaagagttaccattgccagatcagcaaccatgtattgaacccccaccatcatctctg
ctttaccagccaaacttcaacactaactttgaggacagaaatgcatttgtcactggtatt
gcaagatacattgagcaagctacagtccactctagcatgaatgaaatgttagaagagggt
caggaatatgctgtcatgttatacacatggagaagctgctcaagagccattccacaggtc
aagtgcaacgaacagcctaacagagtagaaatttatgagaaaacagtggaagttctggaa
ccagaagtcacaaaactgatgaattttatgtattttcagcgaaatgcaattgaacggttt
tgcggggaggtgagacgcttgtgccacgcagaaaggagaaaagactttgtctctgaagca
tacctgatcacactgggcaaatttatcaacatgtttgcagttttagatgagcttaaaaac
atgaagtgcagcgtgaagaacgaccattcggcctacaagcgagctgctcagttcctacgg
aaaatggcagatcctcagtccatccaagaatcccagaatctctccatgttccttgctaac
cacaacaagataacgcaatctttgcagcagcagttggaagtgattgttggctatgaagaa
ctgcttgcagatattgtgaatttgtgtgtggactactatgaaaacaaaatgtatctaaca
cccagcgagaagcatatgcttttgaaagttatgggctttggattgtacttgatggatgga
agtgtcagtaacatctataagctggatgcaaagaaaaggataaatttagccaagatagac
aagttctttaagcaattgcaggttgtcccactctttggtgacatgcagattgaacttgca
agatacattaagaccagtgcccattatgaggaaaataaatccagatggacatgcacgtct
tccagcagcagtcctcaatacaatatatgtgagcagatgatccaaatcagagaagaccat
atgcgttttatatcagaactggctcgttacagcaacagtgaggtggtgactggttctggt
cgacaggaagctcaaaaaacagatgcggagtatcggaagctctttgatctctctctccaa
ggcttgcagcttctctctcagtggagtgcacatgtcatggaagtgtattcgtggaagcta
gtgcacccaactgacaaatattctaataaagattgtcctgacaacgcagaggagtatgaa
agagcaacgagatacaattatactagtgaggaaaagtttgctttggttgaggtgattgct
atgatcaaaggtcttcaggtgctgatgggaaggatggaaagtgttttcaatcacgccatt
cgccataccatttatgcagctcttcaggactttgcccaggtcacacttagagagccatta
agacaagccattaaaaagaagaaaaatgtcattcagagtgttttgcaggccatcaggaag
accgtctgtgactgggaagcaggtcatgaacctttcaatgacccagctctaaggggagaa
aaagaccccaaaagtggttttgatattaaagtcccgaggcgtgcagtgggaccctccagt
actcagctttacatggtgagaactatgttagagtccctcattgctgacaaaagtggttcc
aagaaaaccttgagaagtagccttgagggacccaccatattggacatagaaaaattccac
cgcgagtctttcttctacactcatttgataaatttcagtgaaaccctgcagcagtgctgt
gatttgtcccagctgtggttcagggaattcttcttagaactgaccatgggcagaagaatc
cagtttcccattgagatgtccatgccttggattctgacggaccatattttggagacaaaa
gaggcatcaatgatggagtatgttctctattctttggacctttataatgacagtgctcat
tatgcacttactaaatttaagaagcagttcctctatgatgagattgaggcagaggtaaac
ctgtgttttgaccaatttgtctacaagctggcagaccaaatatttgcatactacaaggca
atggctggcagcctgcttttggataaacgattacgttcagaatgcaagaatcagggagca
agcattcagttgctacaatccaaccgctatgagacactgctgaaacaaagacacgtccaa
cttctcggtaggtcgatagacctgaaccgactgatcactcagcgaatttcagcagctatg
tacaggtcaatggagctggcaattggtcgatttgaaagcgaggatttgacttccattgtg
gagctggatggcttgatagaaataaacaaaatgactcacaagcttctgagcagatacatg
accttggatagctttgatgccatgttcagggaagccaatcacaacgtgtcagccccttat
ggacgaatcactcttcatgtattttgggaactgaattatgatttccttccaaactactgc
tataatggatccactaacagatttgttcggaccgtgctaccgttttcccaggagtttcag
agggataagcagcccaatgcacagccccagtatctgtacggatcaaaggcactgaatctg
gcgtattccagtatctacagcaactacaggaattttgttggcccccctcactttaaagtc
atctgtaggcttcttgggtatcaggggattgctgtggtgatggaggagttgctgaaagtc
gtcaagagcttgttacaagggacaattcttcagtatgtcaagaccctaatggaagtgatg
cctaagatctgcaggttgccaagacatgagtatggttctccaggtatcttggagtttttc
caccaccagctgaaggacatcgttgaatatgcagagctgaagaccgtctgctttcagaat
ttgcgggaagtgggaaacgctgtcctgttttgcctgctcattgagcagagtctgtcccta
gaggaagtgtgtgacctgctgcacgcagcaccgttccaaaacatcctgcccagagttcac
gtcaaagagggtgaaaggcttgatgctaaaatgaagagactagaatcaaaatatgctcca
ctacacttagtccctctcattgaaagactgggaacaccacagcaaatagcaatcgcgagg
gaaggggacttgctgaccaaagaacgcctgtgctgcggcctgtccatgtttgaggttatc
ctgacacggatccgatccttcctggacgaccccatctggcgtgggcccctgcccagcaac
ggggtgatgcacgtggacgagtgcgtggaattccaccgcctgtggagcgcgatgcagttc
gtctactgcatccccgtgggaacgcacgagttcactgtggagcagtgctttggagacggc
ttgcactgggctggctgtatgatcattgtgcttttgggacagcagcgtcgcttcgatgtg
ttggatttctgctaccacctgttgaaagtccaaaagcacgatggcaaagacgaagttata
aagaatgtgcctttgaagaaaatggttgaaagaattcgcaagttccagattctgaatgat
gaaataattgctattttggacaagtatttgaagtctggggatggagagagcacacccgtg
gaacacgtgcgctgcttccagcctcctattcatcagtcccttgccagcaactag
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